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The map label for this gene is 209550294

Identifier: 209550294

GI number: 209550294

Start: 2759411

End: 2760655

Strand: Reverse

Name: 209550294

Synonym: Rleg2_2714

Alternate gene names: NA

Gene position: 2760655-2759411 (Counterclockwise)

Preceding gene: 209550297

Following gene: 209550293

Centisome position: 60.83

GC content: 59.36

Gene sequence:

>1245_bases
GTGAACATACTAATGAAGAAATCGCTAACAGAACGCTTGGCCATCCTTTCCGATGCCGCCAAATATGATGCTTCCTGCGC
TTCCAGCGGCACGGTGAAACGCGATTCGGCGGCAAGCGGCGGGCTCGGCTCGACCGAGGGGTCCGGCATCTGTCATGCCT
ATGCCCCGGATGGGCGATGCATTTCGCTTCTGAAAATACTGCTGACCAATTTCTGCATCTACGACTGCGCCTATTGCATC
AATCGCTCGTCGAGCAATGTCGAACGGGCGCGCTTCACGCCCGAGGAAGTGATCTGGCTGACGCTGGAATTCTACCGCCG
CAATTATATCGAGGGCCTGTTCCTTTCCTCGGGCATTATCCGCTCGTCCGATTACACGATGGAAGAGATGGTCCGCATCG
TCCGCGAACTGCGCGTGACGCATAATTTTCGCGGTTATATCCATCTGAAATCGATCCCGGAGGCATCGCCGCGGCTGATC
GAAGAGGCGGGGCTTTTTGCCGACAGGCTGTCGCTCAATATCGAGTTGCCGACGGATAACGGCATCAGCCGCTTTGCGCC
GGAAAAGAAGCCCGCCAATATTCGCCGATCGATGGGCGATCTGAGGCTGAAGATCGAGGCCGCCGGCGAGCCGACGCTGC
GCACGAAGAAGCGTCAGCGCTTCGTGCCGGCCGGCCAGAGCACGCAGATGATCGTCGGTGCGGACGGCGCGAATGATGCG
ACGATCCTTGCGACCAGCGGCCGGCTTTACAGCAGCTACGGCCTGAAGCGTGTCTATTATTCCGCCTTCAGCCCGATCCC
GGATTCATCGAAAAACCTGCCGCTGATCAAGCCGCCGCTGATGCGCGAACACCGGCTCTATCAGGCAGACTGGCTCTATC
GGTTCTATGGGTTCGGCATCGACGAAATTACTGCCAGCCAGACCGGCGGCATGCTCGACCTCAACCTCGACCCGAAGCTT
GCCTGGGCGCTGGCGAACCGGGCCGAATTTCCCGTCGATATCAACAAAGCCGAACGTGAACGCCTACTGCGCGTTCCCGG
TCTCGGCACGAAGACGGTCAAATCAATCGTTTCGGCTCGACGCTTTCGCCGGCTGCGGCTCGACGATCTGTCGCGGCTCG
GCATCTCGATCAAGAAGGTTCAGTCCTTCATCTCGGCGGAAGGCTGGTCGCCGCGCCGGCTGATCGACCGCCCGGACCTT
CGCGCCATGTTCGAGCCGAAACCTGAACAATTGTCGCTGCTATGA

Upstream 100 bases:

>100_bases
CATGAACGGAAAAGCGAGCCACCGCGATACCGGGTCATCAGGCCCAAAAACGCGGTTGAGGCAGGATCGCCGCGATTGAC
TTTGTCCGCAGGAACATATA

Downstream 100 bases:

>100_bases
TGCGCCGGGTCGTGCTTGCGGGACGGGGCGATCTTGCCGAATGGCGCGATGCCGCGCGCGCCTTCGCGGCCGCCGGCATT
TTGCCTGAGGAGATCGACTG

Product: radical SAM protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNILMKKSLTERLAILSDAAKYDASCASSGTVKRDSAASGGLGSTEGSGICHAYAPDGRCISLLKILLTNFCIYDCAYCI
NRSSSNVERARFTPEEVIWLTLEFYRRNYIEGLFLSSGIIRSSDYTMEEMVRIVRELRVTHNFRGYIHLKSIPEASPRLI
EEAGLFADRLSLNIELPTDNGISRFAPEKKPANIRRSMGDLRLKIEAAGEPTLRTKKRQRFVPAGQSTQMIVGADGANDA
TILATSGRLYSSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFGIDEITASQTGGMLDLNLDPKL
AWALANRAEFPVDINKAERERLLRVPGLGTKTVKSIVSARRFRRLRLDDLSRLGISIKKVQSFISAEGWSPRRLIDRPDL
RAMFEPKPEQLSLL

Sequences:

>Translated_414_residues
MNILMKKSLTERLAILSDAAKYDASCASSGTVKRDSAASGGLGSTEGSGICHAYAPDGRCISLLKILLTNFCIYDCAYCI
NRSSSNVERARFTPEEVIWLTLEFYRRNYIEGLFLSSGIIRSSDYTMEEMVRIVRELRVTHNFRGYIHLKSIPEASPRLI
EEAGLFADRLSLNIELPTDNGISRFAPEKKPANIRRSMGDLRLKIEAAGEPTLRTKKRQRFVPAGQSTQMIVGADGANDA
TILATSGRLYSSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFGIDEITASQTGGMLDLNLDPKL
AWALANRAEFPVDINKAERERLLRVPGLGTKTVKSIVSARRFRRLRLDDLSRLGISIKKVQSFISAEGWSPRRLIDRPDL
RAMFEPKPEQLSLL
>Mature_414_residues
MNILMKKSLTERLAILSDAAKYDASCASSGTVKRDSAASGGLGSTEGSGICHAYAPDGRCISLLKILLTNFCIYDCAYCI
NRSSSNVERARFTPEEVIWLTLEFYRRNYIEGLFLSSGIIRSSDYTMEEMVRIVRELRVTHNFRGYIHLKSIPEASPRLI
EEAGLFADRLSLNIELPTDNGISRFAPEKKPANIRRSMGDLRLKIEAAGEPTLRTKKRQRFVPAGQSTQMIVGADGANDA
TILATSGRLYSSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFGIDEITASQTGGMLDLNLDPKL
AWALANRAEFPVDINKAERERLLRVPGLGTKTVKSIVSARRFRRLRLDDLSRLGISIKKVQSFISAEGWSPRRLIDRPDL
RAMFEPKPEQLSLL

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46541; Mature: 46541

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILMKKSLTERLAILSDAAKYDASCASSGTVKRDSAASGGLGSTEGSGICHAYAPDGRC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
ISLLKILLTNFCIYDCAYCINRSSSNVERARFTPEEVIWLTLEFYRRNYIEGLFLSSGII
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHEEEEEHHHHHHHHHHHHHHCCCCE
RSSDYTMEEMVRIVRELRVTHNFRGYIHLKSIPEASPRLIEEAGLFADRLSLNIELPTDN
ECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCEEEEEEEEEECCCCC
GISRFAPEKKPANIRRSMGDLRLKIEAAGEPTLRTKKRQRFVPAGQSTQMIVGADGANDA
CHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCE
TILATSGRLYSSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFGI
EEEEECCCCHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
DEITASQTGGMLDLNLDPKLAWALANRAEFPVDINKAERERLLRVPGLGTKTVKSIVSAR
HHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
RFRRLRLDDLSRLGISIKKVQSFISAEGWSPRRLIDRPDLRAMFEPKPEQLSLL
HHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCHHCCCC
>Mature Secondary Structure
MNILMKKSLTERLAILSDAAKYDASCASSGTVKRDSAASGGLGSTEGSGICHAYAPDGRC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
ISLLKILLTNFCIYDCAYCINRSSSNVERARFTPEEVIWLTLEFYRRNYIEGLFLSSGII
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHEEEEEHHHHHHHHHHHHHHCCCCE
RSSDYTMEEMVRIVRELRVTHNFRGYIHLKSIPEASPRLIEEAGLFADRLSLNIELPTDN
ECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCEEEEEEEEEECCCCC
GISRFAPEKKPANIRRSMGDLRLKIEAAGEPTLRTKKRQRFVPAGQSTQMIVGADGANDA
CHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCE
TILATSGRLYSSYGLKRVYYSAFSPIPDSSKNLPLIKPPLMREHRLYQADWLYRFYGFGI
EEEEECCCCHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
DEITASQTGGMLDLNLDPKLAWALANRAEFPVDINKAERERLLRVPGLGTKTVKSIVSAR
HHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH
RFRRLRLDDLSRLGISIKKVQSFISAEGWSPRRLIDRPDLRAMFEPKPEQLSLL
HHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCHHCCCCCCCHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA