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The map label for this gene is ybdA [C]

Identifier: 209550265

GI number: 209550265

Start: 2725778

End: 2726998

Strand: Reverse

Name: ybdA [C]

Synonym: Rleg2_2685

Alternate gene names: 209550265

Gene position: 2726998-2725778 (Counterclockwise)

Preceding gene: 209550266

Following gene: 209550264

Centisome position: 60.09

GC content: 66.01

Gene sequence:

>1221_bases
ATGGACATATCCCAAGGCCCGCGGAGCGTTCTTCGCCACCCCGGCTATCTGAACTTCGCTGCCTCCCGCGTCTTTTCCTC
GCTTGCCTTCCAGTCCATCGGCATCGCCATGGGCTGGATGATCTATGATCAGACGCACAGCGCCTTTGCGCTCGGCCTCG
TCGGCCTCTGCCAGTTCCTGCCGATGGCGGTGCTGACCTTTGTCGTCGGCCATGTCGCCGACCGGTTCGACCGGCGGCGT
ATCGGCCTCATCTGCCAGCTGATCGAGGCGGTGACGGCGCTGGTGCTGGCGGTTGCCACCTGGCAGCAATGGCTGACGCC
TTCAGGCATCCTTGTCGCCGTCACGGTGCTTGGCGCCGTTGTCGCCTTCGAGCGGCCGACCATGGCGGCTCTGCTGCCGA
ACATCGTGCCGGCTTCGATGCTGCAGAAGGCGGTCGCCACCTCCACCTCGCTGATGCAGACGGCGCTGATCATCGGCCCC
TCGCTCGGCGGCTTGCTCTACGGCCTCCACCCGGTGGCGCCCTTTGCCGTGTCGGCGCTGCTCTTTGCCGTTGCAAGCTT
CAACGTCATCTCGATCCGCATGCAGTGGGCGCCTTCCAAACGCGAGCCGGTGACGCTCGCCTCGGTCTTTGCCGGCGTCT
CCTTCATCCGCAGCCGGCCGGTGATGCTCGGCACGATCTCGCTCGATCTCTTCGCGGTGCTGCTCGGCGGCGCCACGGCA
CTGCTGCCGATGTTTGCCCGCGATATCCTGCATGCCGGTCCCTGGGAGCTCGGCCTTTTGCGCGCCGCACCGGCGATCGG
CGCGCTTGCCATGTCGATCGTGCTCGCCCGCCGGCCGCTCGAGAGCAATGTCGGGCGCAAGATGCTTGCTGCCGTCGCCG
TGTTCGGCCTCGCCACCATCGTCTTTTCGCTGTCCACCAACATCACGCTTTCGGTCGCTGCCCTGCTTGTTGTCGGCGCG
TCGGATACGGTCAGCGTCGTCGTGCGCAGTTCGCTGGTGCAGCTTCTGACGCCGGATGAGATGCGCGGCCGCGTCAGCGC
GGTCAACTCGCTGTTCATCGGCACCTCCAACCAGCTCGGCGAATTCGAATCCGGCATGATGGCGGCAGCCCTCGGGCCGG
TCGCCACCGGCATCGTCGGCGGGCTCGGCACGATCATCGTCGTGCTCCTGTGGATGAGGCTCTTCCCCGATCTTACCAAG
GTCAAGACGCTGCAGGGCTGA

Upstream 100 bases:

>100_bases
TGCAATTGACAAACCGCTCATCGGAGCAGAACACCGTTCTGACATTCACGAAAACCTCCTGAAGGCCGGGGCCTCCCATC
GTCGGCCGGTGACATCGCAA

Downstream 100 bases:

>100_bases
AACATGCATGGCGCGTTGAAAGTGGAAGTCGGTCCCGTTAGGGTCCGCGCCAACCATTATTCGGCGGGGGCCGCGTGACG
AAAACTTTTCTATCCTATGT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; DrugProton Antiporter; Facilitator Superfamily Transporter; Permease Of Facilitator Superfamily; Transporter Facilitator Family; Transmembrane Protein; Membrane Transporter; Facilitator Superfamily Transporter Permease; MFS Family Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Transmembrane Efflux Protein; Permease Facilitator Superfamily; Macrolide-Efflux Protein; Permease Protein; Permease; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Integral Membrane Efflux Protein; Drug Proton Antiporter; Amino Acid Adenylation Domain-Containing Protein; Integral Membrane Protein MFS Transporter; Integral Membrane Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter; Facilitator Superfamily Transporter Transporter; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDISQGPRSVLRHPGYLNFAASRVFSSLAFQSIGIAMGWMIYDQTHSAFALGLVGLCQFLPMAVLTFVVGHVADRFDRRR
IGLICQLIEAVTALVLAVATWQQWLTPSGILVAVTVLGAVVAFERPTMAALLPNIVPASMLQKAVATSTSLMQTALIIGP
SLGGLLYGLHPVAPFAVSALLFAVASFNVISIRMQWAPSKREPVTLASVFAGVSFIRSRPVMLGTISLDLFAVLLGGATA
LLPMFARDILHAGPWELGLLRAAPAIGALAMSIVLARRPLESNVGRKMLAAVAVFGLATIVFSLSTNITLSVAALLVVGA
SDTVSVVVRSSLVQLLTPDEMRGRVSAVNSLFIGTSNQLGEFESGMMAAALGPVATGIVGGLGTIIVVLLWMRLFPDLTK
VKTLQG

Sequences:

>Translated_406_residues
MDISQGPRSVLRHPGYLNFAASRVFSSLAFQSIGIAMGWMIYDQTHSAFALGLVGLCQFLPMAVLTFVVGHVADRFDRRR
IGLICQLIEAVTALVLAVATWQQWLTPSGILVAVTVLGAVVAFERPTMAALLPNIVPASMLQKAVATSTSLMQTALIIGP
SLGGLLYGLHPVAPFAVSALLFAVASFNVISIRMQWAPSKREPVTLASVFAGVSFIRSRPVMLGTISLDLFAVLLGGATA
LLPMFARDILHAGPWELGLLRAAPAIGALAMSIVLARRPLESNVGRKMLAAVAVFGLATIVFSLSTNITLSVAALLVVGA
SDTVSVVVRSSLVQLLTPDEMRGRVSAVNSLFIGTSNQLGEFESGMMAAALGPVATGIVGGLGTIIVVLLWMRLFPDLTK
VKTLQG
>Mature_406_residues
MDISQGPRSVLRHPGYLNFAASRVFSSLAFQSIGIAMGWMIYDQTHSAFALGLVGLCQFLPMAVLTFVVGHVADRFDRRR
IGLICQLIEAVTALVLAVATWQQWLTPSGILVAVTVLGAVVAFERPTMAALLPNIVPASMLQKAVATSTSLMQTALIIGP
SLGGLLYGLHPVAPFAVSALLFAVASFNVISIRMQWAPSKREPVTLASVFAGVSFIRSRPVMLGTISLDLFAVLLGGATA
LLPMFARDILHAGPWELGLLRAAPAIGALAMSIVLARRPLESNVGRKMLAAVAVFGLATIVFSLSTNITLSVAALLVVGA
SDTVSVVVRSSLVQLLTPDEMRGRVSAVNSLFIGTSNQLGEFESGMMAAALGPVATGIVGGLGTIIVVLLWMRLFPDLTK
VKTLQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42744; Mature: 42744

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISQGPRSVLRHPGYLNFAASRVFSSLAFQSIGIAMGWMIYDQTHSAFALGLVGLCQFL
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHH
PMAVLTFVVGHVADRFDRRRIGLICQLIEAVTALVLAVATWQQWLTPSGILVAVTVLGAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VAFERPTMAALLPNIVPASMLQKAVATSTSLMQTALIIGPSLGGLLYGLHPVAPFAVSAL
HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LFAVASFNVISIRMQWAPSKREPVTLASVFAGVSFIRSRPVMLGTISLDLFAVLLGGATA
HHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHH
LLPMFARDILHAGPWELGLLRAAPAIGALAMSIVLARRPLESNVGRKMLAAVAVFGLATI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VFSLSTNITLSVAALLVVGASDTVSVVVRSSLVQLLTPDEMRGRVSAVNSLFIGTSNQLG
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCC
EFESGMMAAALGPVATGIVGGLGTIIVVLLWMRLFPDLTKVKTLQG
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MDISQGPRSVLRHPGYLNFAASRVFSSLAFQSIGIAMGWMIYDQTHSAFALGLVGLCQFL
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHH
PMAVLTFVVGHVADRFDRRRIGLICQLIEAVTALVLAVATWQQWLTPSGILVAVTVLGAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VAFERPTMAALLPNIVPASMLQKAVATSTSLMQTALIIGPSLGGLLYGLHPVAPFAVSAL
HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LFAVASFNVISIRMQWAPSKREPVTLASVFAGVSFIRSRPVMLGTISLDLFAVLLGGATA
HHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHH
LLPMFARDILHAGPWELGLLRAAPAIGALAMSIVLARRPLESNVGRKMLAAVAVFGLATI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VFSLSTNITLSVAALLVVGASDTVSVVVRSSLVQLLTPDEMRGRVSAVNSLFIGTSNQLG
HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCC
EFESGMMAAALGPVATGIVGGLGTIIVVLLWMRLFPDLTKVKTLQG
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA