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The map label for this gene is 209550154

Identifier: 209550154

GI number: 209550154

Start: 2612782

End: 2613384

Strand: Reverse

Name: 209550154

Synonym: Rleg2_2574

Alternate gene names: NA

Gene position: 2613384-2612782 (Counterclockwise)

Preceding gene: 209550156

Following gene: 209550153

Centisome position: 57.59

GC content: 58.04

Gene sequence:

>603_bases
ATGAAGACATTTCGCATCGCCGTCTGGGTCGGTGTCCTGATACTTGCCGGGGTTCTCGGGTTCTTCAGGTGGTATCCTTT
AAAATCGGGGGATGTGGCGGTGGAGGCGCCCTTCGGTGTTCCATTTACCCTGGTCTCGCAGAGCGGACGGCCGATTACCG
AAGAAGCGTTGCGCGGCAAGCCGACGGCGCTGTTTTTCGGCTTTACCCATTGCCCAGAGGTCTGCCCGACGACGCTTTTC
GAGCTGAACGGCTGGATGGAGAAGGTCGATCCGAAGGGTGACAAGCTGCAAGCCTATTTCGTGACCGTCGATCCGGAGCG
CGACACGCCCGAGATCATGAACGAATATGTCTCCAACGTTTCCAAGCGCATCACCGGCATCTCTGGTCCGCCCGACAAGA
TCGCCGAAGTCATCAAGGGTTTCCGCGTCTACGCCAAGAAAGTGCCGGTCGACGAGAAGGATCCGAACGGCGATTACACG
ATGGATCACACCGCCTCGGTCTTCCTGCTTGATTCTGCCGGGCGGTTTGCCGGAACGATCGCCTATGGCGAAAACCCGGA
CACGGCGGTAAAGAAGCTGGAGAATCTCGTCAACAAGGGGTGA

Upstream 100 bases:

>100_bases
GGGTCAGAAAACATATTGTTGAGTTGCGCGCCTTCGGTCGAGACTATAATCACGCCGGCAGAGGCGGGCGACGCATCCGC
CTGGATCGAGGATCTCGCCA

Downstream 100 bases:

>100_bases
TGGTTTCAGCGTGATGGGGCGTTGGCTCGACCGGTGGCGGGCAACGGAAACGGGAAAGACCGCCTATCGTGAGTGAAATC
CGCCTTTACGTGACGACGAC

Product: electron transporter SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKTFRIAVWVGVLILAGVLGFFRWYPLKSGDVAVEAPFGVPFTLVSQSGRPITEEALRGKPTALFFGFTHCPEVCPTTLF
ELNGWMEKVDPKGDKLQAYFVTVDPERDTPEIMNEYVSNVSKRITGISGPPDKIAEVIKGFRVYAKKVPVDEKDPNGDYT
MDHTASVFLLDSAGRFAGTIAYGENPDTAVKKLENLVNKG

Sequences:

>Translated_200_residues
MKTFRIAVWVGVLILAGVLGFFRWYPLKSGDVAVEAPFGVPFTLVSQSGRPITEEALRGKPTALFFGFTHCPEVCPTTLF
ELNGWMEKVDPKGDKLQAYFVTVDPERDTPEIMNEYVSNVSKRITGISGPPDKIAEVIKGFRVYAKKVPVDEKDPNGDYT
MDHTASVFLLDSAGRFAGTIAYGENPDTAVKKLENLVNKG
>Mature_200_residues
MKTFRIAVWVGVLILAGVLGFFRWYPLKSGDVAVEAPFGVPFTLVSQSGRPITEEALRGKPTALFFGFTHCPEVCPTTLF
ELNGWMEKVDPKGDKLQAYFVTVDPERDTPEIMNEYVSNVSKRITGISGPPDKIAEVIKGFRVYAKKVPVDEKDPNGDYT
MDHTASVFLLDSAGRFAGTIAYGENPDTAVKKLENLVNKG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=146, Percent_Identity=35.6164383561644, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI281182722, Length=146, Percent_Identity=35.6164383561644, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI281182716, Length=146, Percent_Identity=35.6164383561644, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI153791313, Length=146, Percent_Identity=35.6164383561644, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI4759068, Length=141, Percent_Identity=34.0425531914894, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17531419, Length=169, Percent_Identity=32.5443786982249, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6319498, Length=170, Percent_Identity=37.0588235294118, Blast_Score=127, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6319511, Length=157, Percent_Identity=35.031847133758, Blast_Score=108, Evalue=4e-25,
Organism=Drosophila melanogaster, GI19920710, Length=166, Percent_Identity=36.144578313253, Blast_Score=107, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22037; Mature: 22037

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFRIAVWVGVLILAGVLGFFRWYPLKSGDVAVEAPFGVPFTLVSQSGRPITEEALRGK
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHCCC
PTALFFGFTHCPEVCPTTLFELNGWMEKVDPKGDKLQAYFVTVDPERDTPEIMNEYVSNV
CCEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
SKRITGISGPPDKIAEVIKGFRVYAKKVPVDEKDPNGDYTMDHTASVFLLDSAGRFAGTI
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEE
AYGENPDTAVKKLENLVNKG
EECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKTFRIAVWVGVLILAGVLGFFRWYPLKSGDVAVEAPFGVPFTLVSQSGRPITEEALRGK
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHCCC
PTALFFGFTHCPEVCPTTLFELNGWMEKVDPKGDKLQAYFVTVDPERDTPEIMNEYVSNV
CCEEEEECHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
SKRITGISGPPDKIAEVIKGFRVYAKKVPVDEKDPNGDYTMDHTASVFLLDSAGRFAGTI
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEEECCCCEEEEE
AYGENPDTAVKKLENLVNKG
EECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA