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The map label for this gene is potC [C]

Identifier: 209550063

GI number: 209550063

Start: 2512746

End: 2514440

Strand: Reverse

Name: potC [C]

Synonym: Rleg2_2480

Alternate gene names: 209550063

Gene position: 2514440-2512746 (Counterclockwise)

Preceding gene: 209550064

Following gene: 209550062

Centisome position: 55.41

GC content: 63.89

Gene sequence:

>1695_bases
ATGCACGGCTATGTCAGAACCGGCAACAGCCAGCCCGCCTGGCTGTTTCCCTTTGTCGTCATCACCGTCCTGATCCTCAG
CGTGCTGCCGCTCGCCCGCCTTGCCATGGTCGGGATCGCGGCCTTCGCCAATGGCGGCGTTCTGACTGTGCTCGGCGACC
CGTCGCTCTGGTCGGCGACCTATTACACCATCGTCACGGCAATTTTCGGCACTATCATCTCGCTGGTCATCGGCTGCCTC
TTCGCCTTCCTGCTGACGCTGACCGATATTCGTGGCAAGGGGCTGCTCAGCTTCTTCTTCGTGCTGCCGATGATGATCCC
GCCGCAGGTGACGGCGCTGGCCTGGGTCCAGATGTCGGGGCCATCAAGCCCGCTGTTGAAAGCGCTCTCCATCGCCCCGC
CGCTTGGCTCGCCGCAGCCGCTCTATTCGGTCGGCGGCATCGCGCTGCTTTATGGCGTGCAGCATGCGCCGCTGGTCTAT
CTGGCGCTCCGGGCCGGGTTGATGACGCTGCCGCGCGACGGGGTCGAGGCGGCGCGGCTTTCCGGCGCCTCCAGCCTGCG
GGTGTTCCGCGACATCATCCTGCCGCTGTCGCTGCCCGGCATCATTGCCGGGGCGGCGATCTCCTTCGTCTCCTGCACCG
GCAATTTCGGCATTCCCGCCATTCTCGGTATTCCGGCCTCGATCTTCACACTGCCGACGCTTATCTTCACCAAGTTTTCC
GCTTTCACCAGCCGCACCTTCGGCGATGTCGCCGTGCTCTCGGCTGTTATCGCGATGATCTCGGTCGCCGGGCTGATGAT
CCAGGATCGGGCGCTGCGCGGCCGCGATTATCGCGTCATCGGCCTGTCGGGGGCGAGTGCCGCCTTCGAGCTCGGCGCCT
GGCGGTTCGCCTTCACGCCGCTTCTGTGGGCGATCCTGTTCTTGATGCTGGCTGCACCCTTCTTCGCGCTCGTCGCCGGC
GCGCTGGTGCCGGCCTATGGCGTGCCTCTCACCTTCAAGACCATGTCGCTGCATGCCTTTCAGGAGATCCTGCTCCGGCA
GGCGGTGACGCGCACCGCCTTTATCAATTCGCTGTCGCTCGCCGCCGCTACCGCCCTTTGTCTCCTGGCGGTGACAGTGC
TTGCGGCCTATGCACTGACGCGGCGCAGGGACGCGCTATCGCGTATCGTCTCCAGCCTGATCGAGATACCCTATTCGCTG
CCGGGCATCGTCATGGCGGTCTCCTTCATCCTGGTCTTCGCGGCGCCCATCCCGTTCCTGCACATTTCGCTCTACGGCAC
GATCTGGATCATCCTGATCGCTTACCTCTCCTCCTTCTTCGCTGTCAGCCTGAAACCAGTCGTCAGCGCTTTCCACCAGC
TCGACCCGGCGCTAGAAGAGGCGGCGCGGCTTTCCGGCGCGAGCTTCTTCCGCCGGCTTTTCGATATCATCGTACCGCTG
ATTGCGCCGGCCGCCGGTGCCTCGGTCATCCTCGTCTTCCTGATCGCCTGCAACGAGCTGACGATCTCAGCACTTCTCTG
GTCGGCCGGCACCCAGACGCTCGGCGTCGCCATCTACAATCTTGACGACAGCGGCAGTTCCGATCTTGCTTCGGCGCTCT
CGGTGCTGGTCGTCCTCATGGTCGTCGTCATGATGCTGCTGCTCGAACTGCTGGCAAAACGCCTGCCGAAAGGGGTGGTC
CCATGGCGAAACTGA

Upstream 100 bases:

>100_bases
ACCATCAAGGTCCTGCCGATCAAGGCCGCAGATGCGCTCAAGAATACCGACCAGGATCTGAAGACCTTCTCGGGCATCTA
CGGTTCGAACTGATCCTTCC

Downstream 100 bases:

>100_bases
TCCTCAACCGGCTGGCCAAGGATTTCGGCACCGGGCGGGCCGCCGTCAGCGATTTCTCGCTCGATGTGCGCGAGGGCGGC
CTCCTGGCGCTGCTCGGGCC

Product: binding-protein-dependent transporters inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MHGYVRTGNSQPAWLFPFVVITVLILSVLPLARLAMVGIAAFANGGVLTVLGDPSLWSATYYTIVTAIFGTIISLVIGCL
FAFLLTLTDIRGKGLLSFFFVLPMMIPPQVTALAWVQMSGPSSPLLKALSIAPPLGSPQPLYSVGGIALLYGVQHAPLVY
LALRAGLMTLPRDGVEAARLSGASSLRVFRDIILPLSLPGIIAGAAISFVSCTGNFGIPAILGIPASIFTLPTLIFTKFS
AFTSRTFGDVAVLSAVIAMISVAGLMIQDRALRGRDYRVIGLSGASAAFELGAWRFAFTPLLWAILFLMLAAPFFALVAG
ALVPAYGVPLTFKTMSLHAFQEILLRQAVTRTAFINSLSLAAATALCLLAVTVLAAYALTRRRDALSRIVSSLIEIPYSL
PGIVMAVSFILVFAAPIPFLHISLYGTIWIILIAYLSSFFAVSLKPVVSAFHQLDPALEEAARLSGASFFRRLFDIIVPL
IAPAAGASVILVFLIACNELTISALLWSAGTQTLGVAIYNLDDSGSSDLASALSVLVVLMVVVMMLLLELLAKRLPKGVV
PWRN

Sequences:

>Translated_564_residues
MHGYVRTGNSQPAWLFPFVVITVLILSVLPLARLAMVGIAAFANGGVLTVLGDPSLWSATYYTIVTAIFGTIISLVIGCL
FAFLLTLTDIRGKGLLSFFFVLPMMIPPQVTALAWVQMSGPSSPLLKALSIAPPLGSPQPLYSVGGIALLYGVQHAPLVY
LALRAGLMTLPRDGVEAARLSGASSLRVFRDIILPLSLPGIIAGAAISFVSCTGNFGIPAILGIPASIFTLPTLIFTKFS
AFTSRTFGDVAVLSAVIAMISVAGLMIQDRALRGRDYRVIGLSGASAAFELGAWRFAFTPLLWAILFLMLAAPFFALVAG
ALVPAYGVPLTFKTMSLHAFQEILLRQAVTRTAFINSLSLAAATALCLLAVTVLAAYALTRRRDALSRIVSSLIEIPYSL
PGIVMAVSFILVFAAPIPFLHISLYGTIWIILIAYLSSFFAVSLKPVVSAFHQLDPALEEAARLSGASFFRRLFDIIVPL
IAPAAGASVILVFLIACNELTISALLWSAGTQTLGVAIYNLDDSGSSDLASALSVLVVLMVVVMMLLLELLAKRLPKGVV
PWRN
>Mature_564_residues
MHGYVRTGNSQPAWLFPFVVITVLILSVLPLARLAMVGIAAFANGGVLTVLGDPSLWSATYYTIVTAIFGTIISLVIGCL
FAFLLTLTDIRGKGLLSFFFVLPMMIPPQVTALAWVQMSGPSSPLLKALSIAPPLGSPQPLYSVGGIALLYGVQHAPLVY
LALRAGLMTLPRDGVEAARLSGASSLRVFRDIILPLSLPGIIAGAAISFVSCTGNFGIPAILGIPASIFTLPTLIFTKFS
AFTSRTFGDVAVLSAVIAMISVAGLMIQDRALRGRDYRVIGLSGASAAFELGAWRFAFTPLLWAILFLMLAAPFFALVAG
ALVPAYGVPLTFKTMSLHAFQEILLRQAVTRTAFINSLSLAAATALCLLAVTVLAAYALTRRRDALSRIVSSLIEIPYSL
PGIVMAVSFILVFAAPIPFLHISLYGTIWIILIAYLSSFFAVSLKPVVSAFHQLDPALEEAARLSGASFFRRLFDIIVPL
IAPAAGASVILVFLIACNELTISALLWSAGTQTLGVAIYNLDDSGSSDLASALSVLVVLMVVVMMLLLELLAKRLPKGVV
PWRN

Specific function: Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=203, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 59902; Mature: 59902

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGYVRTGNSQPAWLFPFVVITVLILSVLPLARLAMVGIAAFANGGVLTVLGDPSLWSAT
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
YYTIVTAIFGTIISLVIGCLFAFLLTLTDIRGKGLLSFFFVLPMMIPPQVTALAWVQMSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHEEEEECC
PSSPLLKALSIAPPLGSPQPLYSVGGIALLYGVQHAPLVYLALRAGLMTLPRDGVEAARL
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
SGASSLRVFRDIILPLSLPGIIAGAAISFVSCTGNFGIPAILGIPASIFTLPTLIFTKFS
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHH
AFTSRTFGDVAVLSAVIAMISVAGLMIQDRALRGRDYRVIGLSGASAAFELGAWRFAFTP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
LLWAILFLMLAAPFFALVAGALVPAYGVPLTFKTMSLHAFQEILLRQAVTRTAFINSLSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAATALCLLAVTVLAAYALTRRRDALSRIVSSLIEIPYSLPGIVMAVSFILVFAAPIPFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
HISLYGTIWIILIAYLSSFFAVSLKPVVSAFHQLDPALEEAARLSGASFFRRLFDIIVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
IAPAAGASVILVFLIACNELTISALLWSAGTQTLGVAIYNLDDSGSSDLASALSVLVVLM
HCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
VVVMMLLLELLAKRLPKGVVPWRN
HHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHGYVRTGNSQPAWLFPFVVITVLILSVLPLARLAMVGIAAFANGGVLTVLGDPSLWSAT
CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
YYTIVTAIFGTIISLVIGCLFAFLLTLTDIRGKGLLSFFFVLPMMIPPQVTALAWVQMSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHEEEEECC
PSSPLLKALSIAPPLGSPQPLYSVGGIALLYGVQHAPLVYLALRAGLMTLPRDGVEAARL
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
SGASSLRVFRDIILPLSLPGIIAGAAISFVSCTGNFGIPAILGIPASIFTLPTLIFTKFS
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHH
AFTSRTFGDVAVLSAVIAMISVAGLMIQDRALRGRDYRVIGLSGASAAFELGAWRFAFTP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
LLWAILFLMLAAPFFALVAGALVPAYGVPLTFKTMSLHAFQEILLRQAVTRTAFINSLSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAATALCLLAVTVLAAYALTRRRDALSRIVSSLIEIPYSLPGIVMAVSFILVFAAPIPFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH
HISLYGTIWIILIAYLSSFFAVSLKPVVSAFHQLDPALEEAARLSGASFFRRLFDIIVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
IAPAAGASVILVFLIACNELTISALLWSAGTQTLGVAIYNLDDSGSSDLASALSVLVVLM
HCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
VVVMMLLLELLAKRLPKGVVPWRN
HHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]