BacMap

Definition	Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession	NC_011369
Length	4,537,948

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The map label for this gene is znuC [H]

Identifier: 209549967

GI number: 209549967

Start: 2444235

End: 2445146

Strand: Reverse

Name: znuC [H]

Synonym: Rleg2_2383

Alternate gene names: 209549967

Gene position: 2445146-2444235 (Counterclockwise)

Preceding gene: 209549970

Following gene: 209549966

Centisome position: 53.88

GC content: 65.13

Gene sequence:

>912_bases
ATGCTCTCTCCCGCAAATACGAAGGGCGAACCGCTGGTTTCGCTTGAGAATGTCGGCGTTCTGCGCAACGGCCGCTGGCT
TGTGCGCGGCGTCGAATTTTCCGTCTCGCGCGGCGAGATCGTGACGCTGATCGGGCCGAACGGCTCGGGCAAGTCGACCA
GCGCCAAGGCGGCGATCGGTGTGCTGAAGCCGAATGAGGGCAGGGTGGAGCGTCTGGCCGGCCTGAAGGTCGGCTATGTC
CCGCAGAAGCTTGCAATCGACTGGACGCTGCCGCTCTCGGTGCGGCGGCTGATGACGCTGACCGGACCCCTGCCGGAACG
CGACATGCGCGCGGCACTCGAAGCCGCCGGCATCGACCATATGCTCGATGCCGAGGTGCAGCATCTCTCCGGGGGCGAAT
TCCAGCGGGCGCTGATGGCGCGCGCCATTGCCCGCAAACCCGATTTGCTCGTGCTCGACGAGCCGGTGCAGGGTGTCGAT
TTCTCCGGCGAGATCGCGCTCTACGATCTGATCAAATCGATCCGCAACGCCAGCGGCTGCGGCATCCTGCTGATCTCGCA
CGATCTCCACGTCGTCATGGCCGAGACCGACACGGTCATCTGCCTCAACGGCCATGTCTGCTGCCGCGGCACGCCCGAAG
CCGTCAGCCGCAGCCCGGAATATGTGCGTCTGTTCGGCAGCCGCGCGGCGCAGACGCTTGCCGTCTACAGCCATCATCAC
GACCATACGCATCTGCCGGATGGGCGCGTGCAACATGCCGACGGTTCGGTGACCGACCATTGCCAGCCCGCTCGTGGTCC
CGAACGGGACCATGAGCTTGACGGGCATCACGCGCATGACCATGGGCATAGCCACGGTCATGGCCCTCACGATCACGGTC
ACGCCCATGCTGAAGGGGAGCGCCATGCTTGA

Upstream 100 bases:

>100_bases
GAATGCTCCGCTTGAATTGCAGATGTTATGTTATTACATCAATTGCGTTATGCTATAACGTGTGCAATAGCAGGATGCAA
CAGCGCTGTCGGAAAATTTG

Downstream 100 bases:

>100_bases
CGATTTCTTCGTTCGCGCGATCCTTGCCGGCGTCGGGCTGGCGCTGACGACGGGACCGCTCGGCTGCTTCATCATCTGGC
GGCGCATGGCTTATTTCGGG

Product: ABC transporter

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLSPANTKGEPLVSLENVGVLRNGRWLVRGVEFSVSRGEIVTLIGPNGSGKSTSAKAAIGVLKPNEGRVERLAGLKVGYV
PQKLAIDWTLPLSVRRLMTLTGPLPERDMRAALEAAGIDHMLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVD
FSGEIALYDLIKSIRNASGCGILLISHDLHVVMAETDTVICLNGHVCCRGTPEAVSRSPEYVRLFGSRAAQTLAVYSHHH
DHTHLPDGRVQHADGSVTDHCQPARGPERDHELDGHHAHDHGHSHGHGPHDHGHAHAEGERHA

Sequences:

>Translated_303_residues
MLSPANTKGEPLVSLENVGVLRNGRWLVRGVEFSVSRGEIVTLIGPNGSGKSTSAKAAIGVLKPNEGRVERLAGLKVGYV
PQKLAIDWTLPLSVRRLMTLTGPLPERDMRAALEAAGIDHMLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVD
FSGEIALYDLIKSIRNASGCGILLISHDLHVVMAETDTVICLNGHVCCRGTPEAVSRSPEYVRLFGSRAAQTLAVYSHHH
DHTHLPDGRVQHADGSVTDHCQPARGPERDHELDGHHAHDHGHSHGHGPHDHGHAHAEGERHA
>Mature_303_residues
MLSPANTKGEPLVSLENVGVLRNGRWLVRGVEFSVSRGEIVTLIGPNGSGKSTSAKAAIGVLKPNEGRVERLAGLKVGYV
PQKLAIDWTLPLSVRRLMTLTGPLPERDMRAALEAAGIDHMLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVD
FSGEIALYDLIKSIRNASGCGILLISHDLHVVMAETDTVICLNGHVCCRGTPEAVSRSPEYVRLFGSRAAQTLAVYSHHH
DHTHLPDGRVQHADGSVTDHCQPARGPERDHELDGHHAHDHGHSHGHGPHDHGHAHAEGERHA

Specific function: Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system [H]

COG id: COG1121

COG function: function code P; ABC-type Mn/Zn transport systems, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27436953, Length=203, Percent_Identity=30.5418719211823, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27477115, Length=206, Percent_Identity=31.0679611650485, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI6005701, Length=205, Percent_Identity=30.7317073170732, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI108773784, Length=179, Percent_Identity=31.8435754189944, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI108773782, Length=179, Percent_Identity=31.8435754189944, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI31657092, Length=214, Percent_Identity=30.3738317757009, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI153792144, Length=210, Percent_Identity=28.0952380952381, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI255708477, Length=229, Percent_Identity=25.3275109170306, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI69354671, Length=167, Percent_Identity=28.7425149700599, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI27881506, Length=187, Percent_Identity=29.9465240641711, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI10947137, Length=187, Percent_Identity=29.9465240641711, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI10947135, Length=167, Percent_Identity=28.7425149700599, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI105990541, Length=207, Percent_Identity=28.9855072463768, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI148612844, Length=229, Percent_Identity=25.3275109170306, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI9955970, Length=236, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4557481, Length=206, Percent_Identity=27.6699029126214, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1788165, Length=239, Percent_Identity=50.6276150627615, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=30.1724137931034, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87081709, Length=224, Percent_Identity=27.6785714285714, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789864, Length=249, Percent_Identity=28.9156626506024, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1787758, Length=211, Percent_Identity=28.436018957346, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=23.6051502145923, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789890, Length=232, Percent_Identity=26.7241379310345, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1790739, Length=237, Percent_Identity=27.8481012658228, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1786803, Length=248, Percent_Identity=27.0161290322581, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=29.5154185022026, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=30.0970873786408, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=25.8333333333333, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787500, Length=217, Percent_Identity=29.0322580645161, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789032, Length=251, Percent_Identity=27.8884462151394, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789751, Length=194, Percent_Identity=28.3505154639175, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787182, Length=204, Percent_Identity=31.3725490196078, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=181, Percent_Identity=30.939226519337, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786703, Length=200, Percent_Identity=29.5, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787759, Length=203, Percent_Identity=28.0788177339901, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786975, Length=210, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87081782, Length=198, Percent_Identity=29.2929292929293, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789873, Length=204, Percent_Identity=28.921568627451, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI48994997, Length=250, Percent_Identity=27.2, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=25.2100840336134, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=24.0506329113924, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788761, Length=209, Percent_Identity=27.7511961722488, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87082267, Length=239, Percent_Identity=26.3598326359833, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1786319, Length=194, Percent_Identity=27.8350515463918, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1789586, Length=236, Percent_Identity=27.5423728813559, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788053, Length=191, Percent_Identity=29.3193717277487, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787792, Length=275, Percent_Identity=25.8181818181818, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789991, Length=204, Percent_Identity=25.4901960784314, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786563, Length=204, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790190, Length=222, Percent_Identity=27.9279279279279, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=27.8688524590164, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788450, Length=244, Percent_Identity=25.4098360655738, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=31.5789473684211, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787112, Length=219, Percent_Identity=24.6575342465753, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI145693107, Length=250, Percent_Identity=26, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=27.0642201834862, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI2367384, Length=195, Percent_Identity=27.6923076923077, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=232, Percent_Identity=27.1551724137931, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=232, Percent_Identity=27.1551724137931, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=237, Percent_Identity=27.0042194092827, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17569145, Length=227, Percent_Identity=28.1938325991189, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565586, Length=205, Percent_Identity=29.2682926829268, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17559834, Length=192, Percent_Identity=26.0416666666667, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17555318, Length=199, Percent_Identity=28.643216080402, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569143, Length=233, Percent_Identity=26.6094420600858, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115534520, Length=227, Percent_Identity=27.3127753303965, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86564969, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI25146765, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71992070, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71992066, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17569081, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=238, Percent_Identity=25.2100840336134, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=26.9767441860465, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=26.9767441860465, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=26.9767441860465, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320296, Length=250, Percent_Identity=29.2, Blast_Score=86, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6321121, Length=204, Percent_Identity=30.3921568627451, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574259, Length=235, Percent_Identity=30.6382978723404, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24641342, Length=184, Percent_Identity=30.4347826086957, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24666836, Length=194, Percent_Identity=30.4123711340206, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24661270, Length=190, Percent_Identity=29.4736842105263, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355589, Length=190, Percent_Identity=29.4736842105263, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585557, Length=246, Percent_Identity=26.0162601626016, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552437, Length=246, Percent_Identity=26.0162601626016, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45550390, Length=205, Percent_Identity=24.8780487804878, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24642252, Length=187, Percent_Identity=28.8770053475936, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI18859989, Length=187, Percent_Identity=28.8770053475936, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161077321, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI161078426, Length=193, Percent_Identity=27.4611398963731, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24648279, Length=193, Percent_Identity=27.4611398963731, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017882
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32740; Mature: 32740

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPANTKGEPLVSLENVGVLRNGRWLVRGVEFSVSRGEIVTLIGPNGSGKSTSAKAAIG
CCCCCCCCCCCEEEECCCCEEECCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEE
VLKPNEGRVERLAGLKVGYVPQKLAIDWTLPLSVRRLMTLTGPLPERDMRAALEAAGIDH
EECCCCCHHHHHHCCEECCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
MLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVDFSGEIALYDLIKSIRNASGC
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC
GILLISHDLHVVMAETDTVICLNGHVCCRGTPEAVSRSPEYVRLFGSRAAQTLAVYSHHH
EEEEEECCEEEEEECCCEEEEECCEEEECCCHHHHHCCCCEEEEHHHHHHHEEHHHHCCC
DHTHLPDGRVQHADGSVTDHCQPARGPERDHELDGHHAHDHGHSHGHGPHDHGHAHAEGE
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RHA
CCC
>Mature Secondary Structure
MLSPANTKGEPLVSLENVGVLRNGRWLVRGVEFSVSRGEIVTLIGPNGSGKSTSAKAAIG
CCCCCCCCCCCEEEECCCCEEECCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEE
VLKPNEGRVERLAGLKVGYVPQKLAIDWTLPLSVRRLMTLTGPLPERDMRAALEAAGIDH
EECCCCCHHHHHHCCEECCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
MLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVDFSGEIALYDLIKSIRNASGC
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC
GILLISHDLHVVMAETDTVICLNGHVCCRGTPEAVSRSPEYVRLFGSRAAQTLAVYSHHH
EEEEEECCEEEEEECCCEEEEECCEEEECCCHHHHHCCCCEEEEHHHHHHHEEHHHHCCC
DHTHLPDGRVQHADGSVTDHCQPARGPERDHELDGHHAHDHGHSHGHGPHDHGHAHAEGE
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RHA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA