| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is zur [H]
Identifier: 209549965
GI number: 209549965
Start: 2443032
End: 2443430
Strand: Reverse
Name: zur [H]
Synonym: Rleg2_2381
Alternate gene names: 209549965
Gene position: 2443430-2443032 (Counterclockwise)
Preceding gene: 209549966
Following gene: 209549963
Centisome position: 53.84
GC content: 60.65
Gene sequence:
>399_bases ATGACGACACCGCAACTCACCAAGAACCAGTCGCTGGTCTTCGACGTGCTCGAAAAGGCCGAAGGGCCGCTCAGCGCCTA TACCATCCTCGACAAGCTGCGTGACCACGGTTTTCGCGCGCCGCTGCAGGTCTACCGGGCGCTGGAAAAGCTACTCGAAT ACGGTGTCGTGCACCGGCTCGAAAGCATCAATTCCTTCGTTGCCTGCGCCCATCCGGGCGATGACTGCCACAGCCACGGC ATCGTCGCTTTCGCCATCTGCGAAAGCTGCGGCCAGGTGACGGAGTTCCACGATCATGAGGTCGACCACCGGTTGATGGC CTGGGTGCGAGGGCAGAAGTTCAAACCAGCGAAGACGACGATCGAGATCCGCGGTTTGTGCGAGGCTTGTGCGGCGTAA
Upstream 100 bases:
>100_bases CGCCCTCCGGTCCCTCGATCGTGGTCGCGGCGCTGATCCTCTTCATTCTCAGCCTGCTTCCCCTCAGGCGGCATCGCGCA GGCATGCAAGGACAAGGTTC
Downstream 100 bases:
>100_bases GCGGCCACACTATCCGTCGGCACCCTATCCTATCGCACCAACGGGACTTTGACGGGGCGCCCAACTTCTCCACCCTCATT GCTGTGACATCCCGCTGGTC
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTTPQLTKNQSLVFDVLEKAEGPLSAYTILDKLRDHGFRAPLQVYRALEKLLEYGVVHRLESINSFVACAHPGDDCHSHG IVAFAICESCGQVTEFHDHEVDHRLMAWVRGQKFKPAKTTIEIRGLCEACAA
Sequences:
>Translated_132_residues MTTPQLTKNQSLVFDVLEKAEGPLSAYTILDKLRDHGFRAPLQVYRALEKLLEYGVVHRLESINSFVACAHPGDDCHSHG IVAFAICESCGQVTEFHDHEVDHRLMAWVRGQKFKPAKTTIEIRGLCEACAA >Mature_131_residues TTPQLTKNQSLVFDVLEKAEGPLSAYTILDKLRDHGFRAPLQVYRALEKLLEYGVVHRLESINSFVACAHPGDDCHSHGI VAFAICESCGQVTEFHDHEVDHRLMAWVRGQKFKPAKTTIEIRGLCEACAA
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=127, Percent_Identity=37.007874015748, Blast_Score=68, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 14749; Mature: 14618
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQLTKNQSLVFDVLEKAEGPLSAYTILDKLRDHGFRAPLQVYRALEKLLEYGVVHRL CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ESINSFVACAHPGDDCHSHGIVAFAICESCGQVTEFHDHEVDHRLMAWVRGQKFKPAKTT HHHHHHEEECCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH IEIRGLCEACAA HHHHHHHHHHCC >Mature Secondary Structure TTPQLTKNQSLVFDVLEKAEGPLSAYTILDKLRDHGFRAPLQVYRALEKLLEYGVVHRL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ESINSFVACAHPGDDCHSHGIVAFAICESCGQVTEFHDHEVDHRLMAWVRGQKFKPAKTT HHHHHHEEECCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH IEIRGLCEACAA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]