| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209549870
Identifier: 209549870
GI number: 209549870
Start: 2343016
End: 2344548
Strand: Reverse
Name: 209549870
Synonym: Rleg2_2286
Alternate gene names: NA
Gene position: 2344548-2343016 (Counterclockwise)
Preceding gene: 209549871
Following gene: 209549866
Centisome position: 51.67
GC content: 58.9
Gene sequence:
>1533_bases ATGACAGTGTTTGCAAAACCCGTGGCGGTCGATGACTCCCATACCGTCTACGAGAGCGACTTTATCTCAGGCAATCTGCT GGATAACGATATAGCGGCGGCCAACGGCAATATGTTTCTCAACTTCTTCGACGGCGAAAGGGTTCTCGCCAAGCAGGATG GGCAGGTCACCGATATCGAGGGCGGGCACGGGACGTTCCACGTCAAGGCTGACGGCTCCTATACCTATACGTTGAGCGAA GCCGCCAAGGCGGGTTTCATCGATGGCATGACGCTGACCGAGACGATCGGCTACAAGATCTCCGATGGCGCCGGCAATAC GGATGTCGGCCACTTCACGCTTGATATTCACGGCGTCACAAGCCCGCCGGTCGCGGTCGACGACGCCTTTTCCTTCCGCG AAGGCAGTGAGATCGCCGGCAACGTGCTTGCCAATGATCACGCCGGAGAGGCCGGCACACTCTTCCTGCGCTCGGTCGAG GGCACGAACGTCGGAACCGGCGAGCGGCAGACGACCGACGTCGCCGGTGAATTCGGCACCTTCCATTTCTCGGCGGACGG AAGCTTCACCTACAATCTCGATCCGGCCGTGAAGGCGGGTCTTAACGACGGCGAGCATGTCACGGAGAAGCTCCAATATT ACAAGGTTTCCGACGGCGCCGGTCACGCGGACGCCGGCGTGATCTCGCTGACCATCGACGGCGTGACGGACGGCAAGTCG TTGAACACCAATCATGTCGAGGCACAGGCGGATGTGGTGCGCCCCTTCCTGGACCACTACGAACTCCAGGGGGTCGCGGT CGATCCGCAAACGGGCAAGTTTTACGTCAGCTCCGGCCATGGTTTCCCGGATGATTCCATGGTGTATATTTATGACAACG CCGCCGCATTTGAAGCCGACAACGCCAGCGGCGCCATCTCTCTCGGCGAATATGACCGTGGCGAATATGACATCGGCGGA ACCTATTTTGCAGTCCGCGGCGGCGAGATCATCGGAAGAACCAACGAGGCCAGAGGCGAAGGTCCTTTCCCCGATCAGAC CTATCTCGCAAAATGGGATGCCGCAGACGGATCGCTCGATCAGCAGGGCGACCCGATCCCCGGCCTTATCGGCGATAATG GGGCGGGTACGTTCGACTGGGGTGGATTCACGGCCGTCAATACGATGCAGGATTCCACAGGCATCTACGTTGTCGGCCGC ATCGATGATGCGACCTGGCAGGTCTCCAAAATCGATCCCGACACGCTGAGCCCGATCGAATCCAAGACTTTCTCCGCCGG TGGGCTGGGATACGGCTTTGCCGTCGACGGCACGTTCTTCTTCGGCGATTCCTTCGGCAGCGAGCATATCGGCACGGCAT TCGATTTCGAAACCGGGGTCAAGACAGCAATCGATGTCAACATCGCCATATCAGGAGACGACTCCACCACCAACGTGGCC TATGACGCGGCGGCGGATTCGATCTACATCACCAACTCTCAGACCGACGAAATCTCCGTGGTGCACAACATCTCGGACAT ATTGTTCGCCTGA
Upstream 100 bases:
>100_bases CGCTAAAATACCACTAATACTAGAAAATAATTTGACCTTCTCCTGCAATGGCTGTTTTCTCCCAGTCGACCAAGGCGAAT GGATCTTGAAGGAGATATCC
Downstream 100 bases:
>100_bases CGCGCCTTAACCGTATGACGTCGCCCCGTTCGTTTGTACCGGGCGACGTCTAGTCATCAGCGGCGGCCCTACTACTGCAG CGTCCGCGTCTGGATCAGCT
Product: outer membrane adhesin-like protein
Products: NA
Alternate protein names: Outer Membrane Adhesin Like Proteiin; VBCS Repeat-Containing Protein; RTX xin; Large Exoprotein
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTVFAKPVAVDDSHTVYESDFISGNLLDNDIAAANGNMFLNFFDGERVLAKQDGQVTDIEGGHGTFHVKADGSYTYTLSE AAKAGFIDGMTLTETIGYKISDGAGNTDVGHFTLDIHGVTSPPVAVDDAFSFREGSEIAGNVLANDHAGEAGTLFLRSVE GTNVGTGERQTTDVAGEFGTFHFSADGSFTYNLDPAVKAGLNDGEHVTEKLQYYKVSDGAGHADAGVISLTIDGVTDGKS LNTNHVEAQADVVRPFLDHYELQGVAVDPQTGKFYVSSGHGFPDDSMVYIYDNAAAFEADNASGAISLGEYDRGEYDIGG TYFAVRGGEIIGRTNEARGEGPFPDQTYLAKWDAADGSLDQQGDPIPGLIGDNGAGTFDWGGFTAVNTMQDSTGIYVVGR IDDATWQVSKIDPDTLSPIESKTFSAGGLGYGFAVDGTFFFGDSFGSEHIGTAFDFETGVKTAIDVNIAISGDDSTTNVA YDAAADSIYITNSQTDEISVVHNISDILFA
Sequences:
>Translated_510_residues MTVFAKPVAVDDSHTVYESDFISGNLLDNDIAAANGNMFLNFFDGERVLAKQDGQVTDIEGGHGTFHVKADGSYTYTLSE AAKAGFIDGMTLTETIGYKISDGAGNTDVGHFTLDIHGVTSPPVAVDDAFSFREGSEIAGNVLANDHAGEAGTLFLRSVE GTNVGTGERQTTDVAGEFGTFHFSADGSFTYNLDPAVKAGLNDGEHVTEKLQYYKVSDGAGHADAGVISLTIDGVTDGKS LNTNHVEAQADVVRPFLDHYELQGVAVDPQTGKFYVSSGHGFPDDSMVYIYDNAAAFEADNASGAISLGEYDRGEYDIGG TYFAVRGGEIIGRTNEARGEGPFPDQTYLAKWDAADGSLDQQGDPIPGLIGDNGAGTFDWGGFTAVNTMQDSTGIYVVGR IDDATWQVSKIDPDTLSPIESKTFSAGGLGYGFAVDGTFFFGDSFGSEHIGTAFDFETGVKTAIDVNIAISGDDSTTNVA YDAAADSIYITNSQTDEISVVHNISDILFA >Mature_509_residues TVFAKPVAVDDSHTVYESDFISGNLLDNDIAAANGNMFLNFFDGERVLAKQDGQVTDIEGGHGTFHVKADGSYTYTLSEA AKAGFIDGMTLTETIGYKISDGAGNTDVGHFTLDIHGVTSPPVAVDDAFSFREGSEIAGNVLANDHAGEAGTLFLRSVEG TNVGTGERQTTDVAGEFGTFHFSADGSFTYNLDPAVKAGLNDGEHVTEKLQYYKVSDGAGHADAGVISLTIDGVTDGKSL NTNHVEAQADVVRPFLDHYELQGVAVDPQTGKFYVSSGHGFPDDSMVYIYDNAAAFEADNASGAISLGEYDRGEYDIGGT YFAVRGGEIIGRTNEARGEGPFPDQTYLAKWDAADGSLDQQGDPIPGLIGDNGAGTFDWGGFTAVNTMQDSTGIYVVGRI DDATWQVSKIDPDTLSPIESKTFSAGGLGYGFAVDGTFFFGDSFGSEHIGTAFDFETGVKTAIDVNIAISGDDSTTNVAY DAAADSIYITNSQTDEISVVHNISDILFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53791; Mature: 53659
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFAKPVAVDDSHTVYESDFISGNLLDNDIAAANGNMFLNFFDGERVLAKQDGQVTDIE CCEEECEEEECCCCEEEECCCCCCCCCCCCEEECCCCEEEEEECCCEEEECCCCCEEEEC GGHGTFHVKADGSYTYTLSEAAKAGFIDGMTLTETIGYKISDGAGNTDVGHFTLDIHGVT CCCEEEEEEECCCEEEEEHHHCCCCCCCCCEEEHHCCEEEECCCCCCCCEEEEEEEECCC SPPVAVDDAFSFREGSEIAGNVLANDHAGEAGTLFLRSVEGTNVGTGERQTTDVAGEFGT CCCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE FHFSADGSFTYNLDPAVKAGLNDGEHVTEKLQYYKVSDGAGHADAGVISLTIDGVTDGKS EEEECCCEEEEECCHHHHCCCCCCHHHHHEEEEEEECCCCCCCCCCEEEEEEECCCCCCC LNTNHVEAQADVVRPFLDHYELQGVAVDPQTGKFYVSSGHGFPDDSMVYIYDNAAAFEAD CCCCCEEHHHHHHHHHHHCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCEEEECC NASGAISLGEYDRGEYDIGGTYFAVRGGEIIGRTNEARGEGPFPDQTYLAKWDAADGSLD CCCCEEEECCCCCCCEECCCEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCC QQGDPIPGLIGDNGAGTFDWGGFTAVNTMQDSTGIYVVGRIDDATWQVSKIDPDTLSPIE CCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCC SKTFSAGGLGYGFAVDGTFFFGDSFGSEHIGTAFDFETGVKTAIDVNIAISGDDSTTNVA CCCCCCCCCCEEEEECCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCEEE YDAAADSIYITNSQTDEISVVHNISDILFA EECCCCEEEEECCCCCEEEEEECCHHHHCC >Mature Secondary Structure TVFAKPVAVDDSHTVYESDFISGNLLDNDIAAANGNMFLNFFDGERVLAKQDGQVTDIE CEEECEEEECCCCEEEECCCCCCCCCCCCEEECCCCEEEEEECCCEEEECCCCCEEEEC GGHGTFHVKADGSYTYTLSEAAKAGFIDGMTLTETIGYKISDGAGNTDVGHFTLDIHGVT CCCEEEEEEECCCEEEEEHHHCCCCCCCCCEEEHHCCEEEECCCCCCCCEEEEEEEECCC SPPVAVDDAFSFREGSEIAGNVLANDHAGEAGTLFLRSVEGTNVGTGERQTTDVAGEFGT CCCEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE FHFSADGSFTYNLDPAVKAGLNDGEHVTEKLQYYKVSDGAGHADAGVISLTIDGVTDGKS EEEECCCEEEEECCHHHHCCCCCCHHHHHEEEEEEECCCCCCCCCCEEEEEEECCCCCCC LNTNHVEAQADVVRPFLDHYELQGVAVDPQTGKFYVSSGHGFPDDSMVYIYDNAAAFEAD CCCCCEEHHHHHHHHHHHCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCEEEECC NASGAISLGEYDRGEYDIGGTYFAVRGGEIIGRTNEARGEGPFPDQTYLAKWDAADGSLD CCCCEEEECCCCCCCEECCCEEEEEECCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCC QQGDPIPGLIGDNGAGTFDWGGFTAVNTMQDSTGIYVVGRIDDATWQVSKIDPDTLSPIE CCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCC SKTFSAGGLGYGFAVDGTFFFGDSFGSEHIGTAFDFETGVKTAIDVNIAISGDDSTTNVA CCCCCCCCCCEEEEECCEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCEEE YDAAADSIYITNSQTDEISVVHNISDILFA EECCCCEEEEECCCCCEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA