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The map label for this gene is coxM [H]

Identifier: 209549855

GI number: 209549855

Start: 2325733

End: 2326551

Strand: Reverse

Name: coxM [H]

Synonym: Rleg2_2268

Alternate gene names: 209549855

Gene position: 2326551-2325733 (Counterclockwise)

Preceding gene: 209549856

Following gene: 209549854

Centisome position: 51.27

GC content: 63.37

Gene sequence:

>819_bases
ATGGCTGTCGTGCTGATCCTCGTCCTGATTGTCGTCGGCTCCGTGCTGTTTCATGTGCTGAGCCCGTGGTGGTGGACGCC
GATCGCGTCCAACTGGACCTATATCGACAGTACCCTCGTCATCACCTTCTGGATCACCGGTATCGTCTTCGTGGCGGTGG
TGTCGTTCATGGCCTACTGCGTCTTCCGCTTCCGGCATAAGCCCGGAAACCGGGCGCATTATGAGCCCGAGAACCGCCGG
CTGGAATTGCTGCTGGGAGGGGGAACGGCGGTCGGTGTCGCGGCGATGCTGGCGCCCGGCCTCATCGTGTGGAACCAGTT
CATCACGGTGCCTGCCGATGCTGCATCGGTCGAGGTCGTCAGCCAGCAGTGGCTGTGGAGCTTCCGCCTGCCGGGTGCCG
ACGGAAAGCTCGGCCGTGCGGAGACGCGCGACGTCACCCCCGAGAACCCGCTCGGCCTCGACAAGAACGACGCAAGCGGC
CTCGACGACATCATCATCGAGGGGGGCGAGCTGCATCTGCCGATCGGCAAGCCGGTGCACATCCTGCTGCGCTCCGTCGA
TGTGCTCCATGATTTCTATGTGCCGGAATTCCGCGCCAAAATGGACATGATCCCCGGCATGATCACCTATTTCTGGCTCA
CGCCGACGCGGACAGGGACTTTCGAGATCCTCTGCGCCGAACTCTGCGGCGTCGGCCATCCGCAAATGCGCGGTACCGTC
GTCGTCGACAACGACGCGGACTACCAGACATGGCTCGGGCAGCAGCAGACATTCACCCAGCTGACGGCGTCATCGGGAGA
GCCGCCGCCGGCAAACTGA

Upstream 100 bases:

>100_bases
AATTGCCGTAATTGCCGATATTTTCTATCTGTGCGATAATAAAGACGGACTTTTTGCGGAATGCGGTTTCACGGGTCAAC
CTGCTCGAGGAGGAGCGGAA

Downstream 100 bases:

>100_bases
CTTCGGCGCAGCCGCCGGAGCCGCTTGCCGGTTCAGTTGACAGGCGAAGCAGTCGCAGACCGCTTGGGAAAAGGAAGAGA
GATCATGGTCGAGATTCCAT

Product: cytochrome C oxidase subunit II

Products: NA

Alternate protein names: Alternative cytochrome c oxidase polypeptide II; Cytochrome BB3 subunit 2; Oxidase BB(3) subunit 2 [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MAVVLILVLIVVGSVLFHVLSPWWWTPIASNWTYIDSTLVITFWITGIVFVAVVSFMAYCVFRFRHKPGNRAHYEPENRR
LELLLGGGTAVGVAAMLAPGLIVWNQFITVPADAASVEVVSQQWLWSFRLPGADGKLGRAETRDVTPENPLGLDKNDASG
LDDIIIEGGELHLPIGKPVHILLRSVDVLHDFYVPEFRAKMDMIPGMITYFWLTPTRTGTFEILCAELCGVGHPQMRGTV
VVDNDADYQTWLGQQQTFTQLTASSGEPPPAN

Sequences:

>Translated_272_residues
MAVVLILVLIVVGSVLFHVLSPWWWTPIASNWTYIDSTLVITFWITGIVFVAVVSFMAYCVFRFRHKPGNRAHYEPENRR
LELLLGGGTAVGVAAMLAPGLIVWNQFITVPADAASVEVVSQQWLWSFRLPGADGKLGRAETRDVTPENPLGLDKNDASG
LDDIIIEGGELHLPIGKPVHILLRSVDVLHDFYVPEFRAKMDMIPGMITYFWLTPTRTGTFEILCAELCGVGHPQMRGTV
VVDNDADYQTWLGQQQTFTQLTASSGEPPPAN
>Mature_271_residues
AVVLILVLIVVGSVLFHVLSPWWWTPIASNWTYIDSTLVITFWITGIVFVAVVSFMAYCVFRFRHKPGNRAHYEPENRRL
ELLLGGGTAVGVAAMLAPGLIVWNQFITVPADAASVEVVSQQWLWSFRLPGADGKLGRAETRDVTPENPLGLDKNDASGL
DDIIIEGGELHLPIGKPVHILLRSVDVLHDFYVPEFRAKMDMIPGMITYFWLTPTRTGTFEILCAELCGVGHPQMRGTVV
VDNDADYQTWLGQQQTFTQLTASSGEPPPAN

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A ce

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6226540, Length=224, Percent_Identity=23.2142857142857, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 30117; Mature: 29986

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVLILVLIVVGSVLFHVLSPWWWTPIASNWTYIDSTLVITFWITGIVFVAVVSFMAYC
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VFRFRHKPGNRAHYEPENRRLELLLGGGTAVGVAAMLAPGLIVWNQFITVPADAASVEVV
HHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHEEHHEEECCCCCHHHHHH
SQQWLWSFRLPGADGKLGRAETRDVTPENPLGLDKNDASGLDDIIIEGGELHLPIGKPVH
HHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCEEEECCCCHHH
ILLRSVDVLHDFYVPEFRAKMDMIPGMITYFWLTPTRTGTFEILCAELCGVGHPQMRGTV
HHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEE
VVDNDADYQTWLGQQQTFTQLTASSGEPPPAN
EEECCCCHHHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AVVLILVLIVVGSVLFHVLSPWWWTPIASNWTYIDSTLVITFWITGIVFVAVVSFMAYC
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
VFRFRHKPGNRAHYEPENRRLELLLGGGTAVGVAAMLAPGLIVWNQFITVPADAASVEVV
HHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHEEHHEEECCCCCHHHHHH
SQQWLWSFRLPGADGKLGRAETRDVTPENPLGLDKNDASGLDDIIIEGGELHLPIGKPVH
HHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCEEEECCCCHHH
ILLRSVDVLHDFYVPEFRAKMDMIPGMITYFWLTPTRTGTFEILCAELCGVGHPQMRGTV
HHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEE
VVDNDADYQTWLGQQQTFTQLTASSGEPPPAN
EEECCCCHHHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1444719; 12597275 [H]