Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 209549846

GI number: 209549846

Start: 2316382

End: 2317521

Strand: Reverse

Name: ybjZ [C]

Synonym: Rleg2_2259

Alternate gene names: 209549846

Gene position: 2317521-2316382 (Counterclockwise)

Preceding gene: 209549847

Following gene: 209549845

Centisome position: 51.07

GC content: 65.09

Gene sequence:

>1140_bases
ATGACCTTTTTCCAGCTGATGCCGCGCAATGCCTGGCGCAAGCGGCTGCGGGCGATCTTGCTGATGTTTTCGGTCGGCAT
CGCCTTCCTGATCTACGGACTGACGGCGAGTTTCGTCAGCGGCAGCCAGGGTGCGGCCGGCGCCAGCGACAATCTGCTCG
GCGTGTTCAACAAATCGGGCCGGGGATTGCCGCTGCCGATTGCCTATCTCAACCGGATCGCGGCGGTGGGCGATGTCGCG
GCCGTCGCCTATACCGCGCGTATGCGCGGCTTCGTCGAGGTCGAGAAGAATATCGTCGCCGTCAGCGCGGTTGATCCACA
GGCGATTGCCACCGCCAATGGCGCCGAACTCGGGCTGACGCCTGAGCTGATCGCGGCGCTGGAAGTGGGCGGCGACCGGG
TGCTCGTCGGCAGGGCGCTGGCTGAGGCGCAGGGCTGGTCGGTCGGCCAGCGCATCGGCCTCACCAGCCAGCTCTTAAAG
GCCGACGGCAGCCGGAACTGGAGCTTCACCATCGCAGGCGTCTTCGAGGGTGCCGACGCCGGCACCGACACCTATTTCAT
GCTCGCCCGCTACGACATGGTCAATGCCGCCCGCGCGCGGGACAGGGATACGGTCGACGCCTTCGTTGTGCGCCCGCGCG
ACGGTATCGCCTCAGGCGTGCTGGCGGCGCGCATCGATGCGCTCTTTGCCAATTCGGCGGCGCAGACCCGGACGCAATCG
GAAAAACAGTTCCTCGAAGGGTTTCTTCGGCAGTTCGCCGATGTCGGGCTGATCGTCAGCCTCGTCGTCGGCGCGGCCTT
CGTGACGATCCTGATGATATCGGTCAACACCATGCTCTTTGCCATCCGGGAGCGCCGCTTCGAAATCGGCGTGATGAAGG
TGCTCGGCTTTTCCCGGGGCAGCATCGTGGCGCTCATTCTCGGCGAGACGCTGTTCATCTTCGCCATCGGCGGGGCGGGC
GGGCTCATTCTGGCCAAGCTCGCGACGCTGTCGATCGGGCCGGAATTCGGCCTCGTCTTCAGCGGCGAGGTGCTGCTGAA
ATCCGTCGCGATCATTGCCGGGCTCGGCCTTCTCACCGGACTGCTGCCGGCCGTGAACGCCATGCGTCTGCCGATCGTCA
ACGCCTTCAAAACGAGATAG

Upstream 100 bases:

>100_bases
AGAAGACCATCATCATGGTCACGCACGATCCCGAGGCCGCCGCCTTTGCCCGACGCACGCTGCATCTCAACAAGGGCGAA
TTCGTGGAGGGGGAAGGCCG

Downstream 100 bases:

>100_bases
TCCAATGTCATCAGCGCTCAAGCAGACCTTTCTCATGATCAGAATCAATCTCGGCAGCCTGCCGCGGCGGCTCACGATTT
CGCTGTCGATGGTGCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; Transmembrane Protein; ABC Transporter Membrane Protein; Transmembrane Permease; Membrane Transporter Protein; ABC Transport System Permease Protein; Permease MacB Permease Domain

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTFFQLMPRNAWRKRLRAILLMFSVGIAFLIYGLTASFVSGSQGAAGASDNLLGVFNKSGRGLPLPIAYLNRIAAVGDVA
AVAYTARMRGFVEVEKNIVAVSAVDPQAIATANGAELGLTPELIAALEVGGDRVLVGRALAEAQGWSVGQRIGLTSQLLK
ADGSRNWSFTIAGVFEGADAGTDTYFMLARYDMVNAARARDRDTVDAFVVRPRDGIASGVLAARIDALFANSAAQTRTQS
EKQFLEGFLRQFADVGLIVSLVVGAAFVTILMISVNTMLFAIRERRFEIGVMKVLGFSRGSIVALILGETLFIFAIGGAG
GLILAKLATLSIGPEFGLVFSGEVLLKSVAIIAGLGLLTGLLPAVNAMRLPIVNAFKTR

Sequences:

>Translated_379_residues
MTFFQLMPRNAWRKRLRAILLMFSVGIAFLIYGLTASFVSGSQGAAGASDNLLGVFNKSGRGLPLPIAYLNRIAAVGDVA
AVAYTARMRGFVEVEKNIVAVSAVDPQAIATANGAELGLTPELIAALEVGGDRVLVGRALAEAQGWSVGQRIGLTSQLLK
ADGSRNWSFTIAGVFEGADAGTDTYFMLARYDMVNAARARDRDTVDAFVVRPRDGIASGVLAARIDALFANSAAQTRTQS
EKQFLEGFLRQFADVGLIVSLVVGAAFVTILMISVNTMLFAIRERRFEIGVMKVLGFSRGSIVALILGETLFIFAIGGAG
GLILAKLATLSIGPEFGLVFSGEVLLKSVAIIAGLGLLTGLLPAVNAMRLPIVNAFKTR
>Mature_378_residues
TFFQLMPRNAWRKRLRAILLMFSVGIAFLIYGLTASFVSGSQGAAGASDNLLGVFNKSGRGLPLPIAYLNRIAAVGDVAA
VAYTARMRGFVEVEKNIVAVSAVDPQAIATANGAELGLTPELIAALEVGGDRVLVGRALAEAQGWSVGQRIGLTSQLLKA
DGSRNWSFTIAGVFEGADAGTDTYFMLARYDMVNAARARDRDTVDAFVVRPRDGIASGVLAARIDALFANSAAQTRTQSE
KQFLEGFLRQFADVGLIVSLVVGAAFVTILMISVNTMLFAIRERRFEIGVMKVLGFSRGSIVALILGETLFIFAIGGAGG
LILAKLATLSIGPEFGLVFSGEVLLKSVAIIAGLGLLTGLLPAVNAMRLPIVNAFKTR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40065; Mature: 39934

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFQLMPRNAWRKRLRAILLMFSVGIAFLIYGLTASFVSGSQGAAGASDNLLGVFNKSG
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
RGLPLPIAYLNRIAAVGDVAAVAYTARMRGFVEVEKNIVAVSAVDPQAIATANGAELGLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHEECCCCCCCCC
PELIAALEVGGDRVLVGRALAEAQGWSVGQRIGLTSQLLKADGSRNWSFTIAGVFEGADA
HHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHCCHHHHHHHCCCCCCEEEEEEEEECCCCC
GTDTYFMLARYDMVNAARARDRDTVDAFVVRPRDGIASGVLAARIDALFANSAAQTRTQS
CCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
EKQFLEGFLRQFADVGLIVSLVVGAAFVTILMISVNTMLFAIRERRFEIGVMKVLGFSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIVALILGETLFIFAIGGAGGLILAKLATLSIGPEFGLVFSGEVLLKSVAIIAGLGLLTG
CEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
LLPAVNAMRLPIVNAFKTR
HHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure 
TFFQLMPRNAWRKRLRAILLMFSVGIAFLIYGLTASFVSGSQGAAGASDNLLGVFNKSG
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
RGLPLPIAYLNRIAAVGDVAAVAYTARMRGFVEVEKNIVAVSAVDPQAIATANGAELGLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHEECCCCCCCCC
PELIAALEVGGDRVLVGRALAEAQGWSVGQRIGLTSQLLKADGSRNWSFTIAGVFEGADA
HHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHCCHHHHHHHCCCCCCEEEEEEEEECCCCC
GTDTYFMLARYDMVNAARARDRDTVDAFVVRPRDGIASGVLAARIDALFANSAAQTRTQS
CCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
EKQFLEGFLRQFADVGLIVSLVVGAAFVTILMISVNTMLFAIRERRFEIGVMKVLGFSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIVALILGETLFIFAIGGAGGLILAKLATLSIGPEFGLVFSGEVLLKSVAIIAGLGLLTG
CEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
LLPAVNAMRLPIVNAFKTR
HHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA