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The map label for this gene is ocd2 [H]

Identifier: 209549833

GI number: 209549833

Start: 2298453

End: 2299385

Strand: Reverse

Name: ocd2 [H]

Synonym: Rleg2_2245

Alternate gene names: 209549833

Gene position: 2299385-2298453 (Counterclockwise)

Preceding gene: 209549834

Following gene: 209549830

Centisome position: 50.67

GC content: 63.24

Gene sequence:

>933_bases
GTGACGAAAATTCTGAGAGACGAGGATCTGGCCGACAATGCGTTGATGCGTGTTGCCGTCGATGCGCTCGAGACCGCTTT
TCTTGCGAGAGCCGGCAATCGGCTGGTCTCTCCGCCCCGGCATCATGTGTCCTTTCCCGATCGAGGCGATCTCGTCTTCA
CCGTCGGCGGCATGCTTGGCGACAAACCGCTTGCGGGTTTTCGCGTGTACGAAACATTCGACGGGGCAGAGCATTCGCAG
ATCGTCGCGGTGTGGTCGGCCGACGATGCCAGGCTCAAGGGCATCGTTCTCGGTGAGCGCCTCGGCAACCTCAGGACCGG
GGCCATCGGAGGTCTCGCCGTCCGCCATCTCAGCGCGCCCGGCGCCAGGATCGTCGGGATCATCGGCAGCGGAGCGCAAG
CGCGAACCCAGCTTGCCGCAGCCGCCGCCGTTCGAAAACTGGACCGCGCCCGCGTTTACAGCCGCGACGAGAACAATCGC
GCCGCCTTCGCAAGCGAGATGCAGCACGCCTTGGGGCTGGAGGTGGAGCCTGTCGGCAGCGTGTCAGAAGCTGTTTATGA
GGCAGATATCGTCATCTGCGCGACGACGAGCCAAAAGCCTGTCCTCCATGCGCGCGATCTGAAGCCCGGCGTCCACGTCA
ACACTGTCGGCCCGAAAACGCTTCAAGGATACGAGCTCGGTCTTGATGTCGCGGATGCCGCTGCGGTGATCGCGACGGAT
TCTCCCGAACAGACCCGGGCCTACGCTTCGCCCTTTTTCCTCGCCGGCTCCGGCAACGAAGATCGCATAGCCGACCTTGC
CAACATCATTGCCGGGACAGCCGCCGGGCGGGGATTGCCGGAGGACATAACGCTATTTTGCTCCGTAGGTCTCGCCGGAA
CCGAAGTCGTCGTCGCCTCTGCGATCCTCGATAGGGTGGGCGTGTCGGTGTAG

Upstream 100 bases:

>100_bases
TTAGGCCTGGCGCGAATTTTCAGCGCATTTGCTCTACCTGATCTATTGACCTCAAGCACGGTTGGGGTCGCAGGATGCCG
GCGGAAGCTGGAGGTTTGCC

Downstream 100 bases:

>100_bases
GCTTTGATTCAGGGGCGGGCTTCAAGCCTTTGTTTTAACGCAGGTTTGGTTGAGGGCGCGGTATCCTCCAACGTCCCTCA
TCCTGATGAGGTGCGCAGCC

Product: ornithine cyclodeaminase/mu-crystallin

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTKILRDEDLADNALMRVAVDALETAFLARAGNRLVSPPRHHVSFPDRGDLVFTVGGMLGDKPLAGFRVYETFDGAEHSQ
IVAVWSADDARLKGIVLGERLGNLRTGAIGGLAVRHLSAPGARIVGIIGSGAQARTQLAAAAAVRKLDRARVYSRDENNR
AAFASEMQHALGLEVEPVGSVSEAVYEADIVICATTSQKPVLHARDLKPGVHVNTVGPKTLQGYELGLDVADAAAVIATD
SPEQTRAYASPFFLAGSGNEDRIADLANIIAGTAAGRGLPEDITLFCSVGLAGTEVVVASAILDRVGVSV

Sequences:

>Translated_310_residues
MTKILRDEDLADNALMRVAVDALETAFLARAGNRLVSPPRHHVSFPDRGDLVFTVGGMLGDKPLAGFRVYETFDGAEHSQ
IVAVWSADDARLKGIVLGERLGNLRTGAIGGLAVRHLSAPGARIVGIIGSGAQARTQLAAAAAVRKLDRARVYSRDENNR
AAFASEMQHALGLEVEPVGSVSEAVYEADIVICATTSQKPVLHARDLKPGVHVNTVGPKTLQGYELGLDVADAAAVIATD
SPEQTRAYASPFFLAGSGNEDRIADLANIIAGTAAGRGLPEDITLFCSVGLAGTEVVVASAILDRVGVSV
>Mature_309_residues
TKILRDEDLADNALMRVAVDALETAFLARAGNRLVSPPRHHVSFPDRGDLVFTVGGMLGDKPLAGFRVYETFDGAEHSQI
VAVWSADDARLKGIVLGERLGNLRTGAIGGLAVRHLSAPGARIVGIIGSGAQARTQLAAAAAVRKLDRARVYSRDENNRA
AFASEMQHALGLEVEPVGSVSEAVYEADIVICATTSQKPVLHARDLKPGVHVNTVGPKTLQGYELGLDVADAAAVIATDS
PEQTRAYASPFFLAGSGNEDRIADLANIIAGTAAGRGLPEDITLFCSVGLAGTEVVVASAILDRVGVSV

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=227, Percent_Identity=28.6343612334802, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI62241008, Length=227, Percent_Identity=28.6343612334802, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 32425; Mature: 32294

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKILRDEDLADNALMRVAVDALETAFLARAGNRLVSPPRHHVSFPDRGDLVFTVGGMLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEEECCCCC
DKPLAGFRVYETFDGAEHSQIVAVWSADDARLKGIVLGERLGNLRTGAIGGLAVRHLSAP
CCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEHHHHCCCCCCCCCHHHHHHCCCC
GARIVGIIGSGAQARTQLAAAAAVRKLDRARVYSRDENNRAAFASEMQHALGLEVEPVGS
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
VSEAVYEADIVICATTSQKPVLHARDLKPGVHVNTVGPKTLQGYELGLDVADAAAVIATD
HHHHHEECCEEEEEECCCCCCEEECCCCCCEEEECCCCCCCCCEEECCCHHCCEEEEECC
SPEQTRAYASPFFLAGSGNEDRIADLANIIAGTAAGRGLPEDITLFCSVGLAGTEVVVAS
CCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH
AILDRVGVSV
HHHHHHCCCC
>Mature Secondary Structure 
TKILRDEDLADNALMRVAVDALETAFLARAGNRLVSPPRHHVSFPDRGDLVFTVGGMLG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEEECCCCC
DKPLAGFRVYETFDGAEHSQIVAVWSADDARLKGIVLGERLGNLRTGAIGGLAVRHLSAP
CCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEEHHHHCCCCCCCCCHHHHHHCCCC
GARIVGIIGSGAQARTQLAAAAAVRKLDRARVYSRDENNRAAFASEMQHALGLEVEPVGS
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
VSEAVYEADIVICATTSQKPVLHARDLKPGVHVNTVGPKTLQGYELGLDVADAAAVIATD
HHHHHEECCEEEEEECCCCCCEEECCCCCCEEEECCCCCCCCCEEECCCHHCCEEEEECC
SPEQTRAYASPFFLAGSGNEDRIADLANIIAGTAAGRGLPEDITLFCSVGLAGTEVVVAS
CCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH
AILDRVGVSV
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]