| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549813
Identifier: 209549813
GI number: 209549813
Start: 2280866
End: 2281507
Strand: Direct
Name: 209549813
Synonym: Rleg2_2224
Alternate gene names: NA
Gene position: 2280866-2281507 (Clockwise)
Preceding gene: 209549811
Following gene: 209549814
Centisome position: 50.26
GC content: 61.53
Gene sequence:
>642_bases ATGTCGAAGGTGCGTGTCGCAGGGTTTTCCCTGTCCATAGATGGTTTCGGTGCGGGTCCGGAACAAAGCATGCAAGATCC GCTCGGCAAACGCGGAGCCGAGATGTTTCAATGGTTTTTCCATACCCGCACGTTCCGCGCGATGCAGGGAAAGGACGACG GTTCGCAAGGGATTGACGAGGATTATGCCGCGCGCGGCATGGCGAATTTCGGCGCCTTCATTCTCGGGCGCAACATGTTC GGCCCCATTCGCGGCGATTGGCCGGATGAGAGCTGGAAGGGCTGGTGGGGGCCGAACCCGCCCTATCACGCGCCGACCTT TATCCTGACGCACTATCCGCGCGACCCCCTCGTCATGGAGGGCGGCACGACCTTTCACTTCATCCCCGGCGGCATCGAAG ATGCACTTGAAAAGGCGAAGGCTGCGGCCGGCGGCAAGGACGTGAAAGTCGGCGGCGGGGTCAGCACCGTCCGCCAATAT CTGCAGGCCGGCCTGATCGACGAAGTGCATTTCGCCATCTCGCCCGTCGTGCTCGGCAAGGGAGAAGCGATGTTCACCGG CATCGACCTGCCCGCCCTCGGCTTCCGTGTCGCCGAGCATGTCGCCACTGAACACGCCACACATATCGTATTGGCAAAAT AG
Upstream 100 bases:
>100_bases GATATCCACGACATGCACTCCTTGAAAAAACTGGTTGCAATATAGGAGCACTTATGCGACAACGCAACCGGTTTCAAATA GCAATCAGATGGAGGAGGGC
Downstream 100 bases:
>100_bases CGGGCAACCGATCGGCATCCTTTCCGCCAGTGCATGCCGCAGGCTTCCCGCGGCATGCACTGGCGAGGATGGGAAGCACG CGCAACAGGATCGGCGCCAA
Product: bifunctional deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain-Containing Protein; Riboflavin Biosynthesis Protein RibD; Bifunctional Deaminase-Reductase-Like; Bifunctional Deaminase-Reductase-Like Protein; Dihydrofolate Reductase; Riboflavin Biosynthesis Protein; Deaminase-Reductase; Dihydrofolate Reductase Protein; Bifunctional Deaminase-Reductase C-Terminal Protein; Deaminase/Reductase; RibD Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Riboflavin Biosynthesis Protein RibD Domain Protein; Bifunctional Deaminase-Reductase C-Terminal
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSKVRVAGFSLSIDGFGAGPEQSMQDPLGKRGAEMFQWFFHTRTFRAMQGKDDGSQGIDEDYAARGMANFGAFILGRNMF GPIRGDWPDESWKGWWGPNPPYHAPTFILTHYPRDPLVMEGGTTFHFIPGGIEDALEKAKAAAGGKDVKVGGGVSTVRQY LQAGLIDEVHFAISPVVLGKGEAMFTGIDLPALGFRVAEHVATEHATHIVLAK
Sequences:
>Translated_213_residues MSKVRVAGFSLSIDGFGAGPEQSMQDPLGKRGAEMFQWFFHTRTFRAMQGKDDGSQGIDEDYAARGMANFGAFILGRNMF GPIRGDWPDESWKGWWGPNPPYHAPTFILTHYPRDPLVMEGGTTFHFIPGGIEDALEKAKAAAGGKDVKVGGGVSTVRQY LQAGLIDEVHFAISPVVLGKGEAMFTGIDLPALGFRVAEHVATEHATHIVLAK >Mature_212_residues SKVRVAGFSLSIDGFGAGPEQSMQDPLGKRGAEMFQWFFHTRTFRAMQGKDDGSQGIDEDYAARGMANFGAFILGRNMFG PIRGDWPDESWKGWWGPNPPYHAPTFILTHYPRDPLVMEGGTTFHFIPGGIEDALEKAKAAAGGKDVKVGGGVSTVRQYL QAGLIDEVHFAISPVVLGKGEAMFTGIDLPALGFRVAEHVATEHATHIVLAK
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23092; Mature: 22961
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVRVAGFSLSIDGFGAGPEQSMQDPLGKRGAEMFQWFFHTRTFRAMQGKDDGSQGIDE CCCEEEEEEEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH DYAARGMANFGAFILGRNMFGPIRGDWPDESWKGWWGPNPPYHAPTFILTHYPRDPLVME HHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE GGTTFHFIPGGIEDALEKAKAAAGGKDVKVGGGVSTVRQYLQAGLIDEVHFAISPVVLGK CCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHCCEEEEC GEAMFTGIDLPALGFRVAEHVATEHATHIVLAK CCEEEECCCCCHHHHHHHHHHHHHHHCEEEEEC >Mature Secondary Structure SKVRVAGFSLSIDGFGAGPEQSMQDPLGKRGAEMFQWFFHTRTFRAMQGKDDGSQGIDE CCEEEEEEEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH DYAARGMANFGAFILGRNMFGPIRGDWPDESWKGWWGPNPPYHAPTFILTHYPRDPLVME HHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE GGTTFHFIPGGIEDALEKAKAAAGGKDVKVGGGVSTVRQYLQAGLIDEVHFAISPVVLGK CCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHCCEEEEC GEAMFTGIDLPALGFRVAEHVATEHATHIVLAK CCEEEECCCCCHHHHHHHHHHHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA