| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ubiE [H]
Identifier: 209549778
GI number: 209549778
Start: 2244187
End: 2244987
Strand: Reverse
Name: ubiE [H]
Synonym: Rleg2_2188
Alternate gene names: 209549778
Gene position: 2244987-2244187 (Counterclockwise)
Preceding gene: 209549779
Following gene: 209549777
Centisome position: 49.47
GC content: 64.54
Gene sequence:
>801_bases ATGCCGTCGAGTTTCAATGTCGAAAGTGCGGATGGTTATGAGCGGCTGATGGGGCGCTGGAGCAAGAGGCTGGCGCCGCT GCTGATCGATTTCGCCGGTCTCGCGGATGGGGATCGTGTGCTCGATGTCGGCTGCGGCACCGGCAGCCTGGCTTTTACGC TGGCGGAAAGACCAGGCTTGAAGGAGATCGCCGCCATCGATTATTCGCCTGTGTTCGTCGAAGCGGCGAAGTGGGCGAAT TCCGATCCGCGGATCACGATCCAGCAGGGCGACGCCTGCGCGCTGCCCTTCGAGGATAACCGTTTCGACCGGGCGATGTC GCTGCTGGTGCTGCATTTCGTGCCGGAGGCCGCCAAGGCGGTGGCCGAAATGGCGCGCGTCGTGCGCCCAGACGGCGTAG TGGCCGCCGCCGTCTGGGATCATTACGGCGGCATGTCCAACATGCGGATGATGTGGGACACGGTCGTCATGCTCGACGAA AACGCGCTGCCGCTGCGCCGAAAATATTGCTTTCAGCCGATGATGCGGCCGGGGGAGATGAAGGCGTGCTTCATCGCGCA AGGTTTGGCCGAGGTCGAGGAGACGTCGCTGCTGATCCGGATGGATTACCTTTCCTTCGACGACTACTGGCAGCCGATCG CCGCCGGCGAGGGGCCGCTCGGCAAGTATGTCGCCGGGCTGGAGGCAGGCAGGCGGAAGGCGGTCGATGCCGCGGTGAGG GCGGCTTATGAGGCTGGGGAGCCGGATGGGCCGCGGTCGTTTGCTTCTGTGGCTTGGGCGTGCCGGGGCAGGGTGGTTTG A
Upstream 100 bases:
>100_bases CTGAACCGGGGACGACGGAGAGCCCGACGCGCCTTGCGCAAGGCGACGGATCGCTCGGCTCTACGGCGATAGATCATCGT TCTTGAAGAGGGAGGCTTCG
Downstream 100 bases:
>100_bases GATATTAGGCGCGGCCTATCCCACTCTCCCTCATTCCTGTGCCTGTCACAGGAATCCAGCCACGGCGCGTCTGCGCCGTG AATGAATCAATAGTTCAAGG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPSSFNVESADGYERLMGRWSKRLAPLLIDFAGLADGDRVLDVGCGTGSLAFTLAERPGLKEIAAIDYSPVFVEAAKWAN SDPRITIQQGDACALPFEDNRFDRAMSLLVLHFVPEAAKAVAEMARVVRPDGVVAAAVWDHYGGMSNMRMMWDTVVMLDE NALPLRRKYCFQPMMRPGEMKACFIAQGLAEVEETSLLIRMDYLSFDDYWQPIAAGEGPLGKYVAGLEAGRRKAVDAAVR AAYEAGEPDGPRSFASVAWACRGRVV
Sequences:
>Translated_266_residues MPSSFNVESADGYERLMGRWSKRLAPLLIDFAGLADGDRVLDVGCGTGSLAFTLAERPGLKEIAAIDYSPVFVEAAKWAN SDPRITIQQGDACALPFEDNRFDRAMSLLVLHFVPEAAKAVAEMARVVRPDGVVAAAVWDHYGGMSNMRMMWDTVVMLDE NALPLRRKYCFQPMMRPGEMKACFIAQGLAEVEETSLLIRMDYLSFDDYWQPIAAGEGPLGKYVAGLEAGRRKAVDAAVR AAYEAGEPDGPRSFASVAWACRGRVV >Mature_265_residues PSSFNVESADGYERLMGRWSKRLAPLLIDFAGLADGDRVLDVGCGTGSLAFTLAERPGLKEIAAIDYSPVFVEAAKWANS DPRITIQQGDACALPFEDNRFDRAMSLLVLHFVPEAAKAVAEMARVVRPDGVVAAAVWDHYGGMSNMRMMWDTVVMLDEN ALPLRRKYCFQPMMRPGEMKACFIAQGLAEVEETSLLIRMDYLSFDDYWQPIAAGEGPLGKYVAGLEAGRRKAVDAAVRA AYEAGEPDGPRSFASVAWACRGRVV
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 29151; Mature: 29020
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSFNVESADGYERLMGRWSKRLAPLLIDFAGLADGDRVLDVGCGTGSLAFTLAERPGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCC KEIAAIDYSPVFVEAAKWANSDPRITIQQGDACALPFEDNRFDRAMSLLVLHFVPEAAKA HHHHHCCCCHHHHHHHHCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCHHHHH VAEMARVVRPDGVVAAAVWDHYGGMSNMRMMWDTVVMLDENALPLRRKYCFQPMMRPGEM HHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCC KACFIAQGLAEVEETSLLIRMDYLSFDDYWQPIAAGEGPLGKYVAGLEAGRRKAVDAAVR HHHHHHHHHHHHHHCEEEEEEECCCCHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AAYEAGEPDGPRSFASVAWACRGRVV HHHHCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure PSSFNVESADGYERLMGRWSKRLAPLLIDFAGLADGDRVLDVGCGTGSLAFTLAERPGL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCC KEIAAIDYSPVFVEAAKWANSDPRITIQQGDACALPFEDNRFDRAMSLLVLHFVPEAAKA HHHHHCCCCHHHHHHHHCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCHHHHH VAEMARVVRPDGVVAAAVWDHYGGMSNMRMMWDTVVMLDENALPLRRKYCFQPMMRPGEM HHHHHHHHCCCCEEEEEHHHHHCCCCCHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCC KACFIAQGLAEVEETSLLIRMDYLSFDDYWQPIAAGEGPLGKYVAGLEAGRRKAVDAAVR HHHHHHHHHHHHHHCEEEEEEECCCCHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AAYEAGEPDGPRSFASVAWACRGRVV HHHHCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA