| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549722
Identifier: 209549722
GI number: 209549722
Start: 2186212
End: 2187006
Strand: Direct
Name: 209549722
Synonym: Rleg2_2129
Alternate gene names: NA
Gene position: 2186212-2187006 (Clockwise)
Preceding gene: 209549721
Following gene: 209549727
Centisome position: 48.18
GC content: 66.29
Gene sequence:
>795_bases ATGGCGCCGACCGCCCGTCCTCTTGGAGATCATCTGCGCGAATGGCGCCAGCGCCGCCGGATGAGCCAGCTCGACCTGGC GCTGGAGGCCGATATCTCGCAGCGGCATCTGAGCTTCATCGAGAGCGGGCGCGCGACCCCGAGCCGCGACATGCTGCTGC ATCTTGCCGAACGCCTTGGCGTGCCGCTCCGCGACCGGAACCCGCTGTTGCTCGCAGCGGGTTTCGCCCCCGTCTTTACC GAGCGCGCACTCGACGATCCCGCCTTGGAACCGGCGCGCCGCGCCATCGACATGGTGTTGAAAGCTCATCAGCCTTTCCC GGCGCTCGCGATCGACCGCCACTGGACGCTGGTTGCCGCCAATGCGGCGCTGGCGCCGCTCATCTCGGGCATTGCCGATC CGTCGCTGCTGGAACCGCCGGTCAATGTGCTGCGCCTCAGCCTGCACCCGCAAGGACTGGCGCCCCGCATCGCAAACCTC CCGGAATGGCGCGCCCACCTTATCGACCGGCTGCGCCAGCAAGTATCGGCCTCGGGCGATCCGGTATTGGAGAGGCTGCT GAAAGAACTGCTGTCCTATCCGGTGCCCGAAGCGGCGAACGACGCGCATACCGACCACGCCGGCATCGCCATTCCGCTGA AGCTTTCGACCAAGGCCGGCCTGCTATCCCTGATCTCGACGACCACGGTCTTCGGCACGCCCGTCGACATCACTCTGTCG GAACTGGCCGTGGAATCCTTCTTCCCGGCGGATAAGAAAACGGCCGCGATCCTGCGCACCCTTTCCCTCAACTGA
Upstream 100 bases:
>100_bases ATGGCGAAGCACTGATCAAGGGCACGGATTTTGCCGAACTCGAGGGTGGCAAGCTGAAATCCGTCCGCGGTTTCCTCGAC CAACTGCCGGAAGCCGCCTG
Downstream 100 bases:
>100_bases TGCCTAGAATTCTACCCCCGGCTGGCCCTTGATGCCGGAGCGGAAGGGATGTTTGACGAGCTCCATCTCGGTCACAAGAT CGGCGATCTCGATCAGTTCT
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAPTARPLGDHLREWRQRRRMSQLDLALEADISQRHLSFIESGRATPSRDMLLHLAERLGVPLRDRNPLLLAAGFAPVFT ERALDDPALEPARRAIDMVLKAHQPFPALAIDRHWTLVAANAALAPLISGIADPSLLEPPVNVLRLSLHPQGLAPRIANL PEWRAHLIDRLRQQVSASGDPVLERLLKELLSYPVPEAANDAHTDHAGIAIPLKLSTKAGLLSLISTTTVFGTPVDITLS ELAVESFFPADKKTAAILRTLSLN
Sequences:
>Translated_264_residues MAPTARPLGDHLREWRQRRRMSQLDLALEADISQRHLSFIESGRATPSRDMLLHLAERLGVPLRDRNPLLLAAGFAPVFT ERALDDPALEPARRAIDMVLKAHQPFPALAIDRHWTLVAANAALAPLISGIADPSLLEPPVNVLRLSLHPQGLAPRIANL PEWRAHLIDRLRQQVSASGDPVLERLLKELLSYPVPEAANDAHTDHAGIAIPLKLSTKAGLLSLISTTTVFGTPVDITLS ELAVESFFPADKKTAAILRTLSLN >Mature_263_residues APTARPLGDHLREWRQRRRMSQLDLALEADISQRHLSFIESGRATPSRDMLLHLAERLGVPLRDRNPLLLAAGFAPVFTE RALDDPALEPARRAIDMVLKAHQPFPALAIDRHWTLVAANAALAPLISGIADPSLLEPPVNVLRLSLHPQGLAPRIANLP EWRAHLIDRLRQQVSASGDPVLERLLKELLSYPVPEAANDAHTDHAGIAIPLKLSTKAGLLSLISTTTVFGTPVDITLSE LAVESFFPADKKTAAILRTLSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28903; Mature: 28772
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTARPLGDHLREWRQRRRMSQLDLALEADISQRHLSFIESGRATPSRDMLLHLAERLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHC VPLRDRNPLLLAAGFAPVFTERALDDPALEPARRAIDMVLKAHQPFPALAIDRHWTLVAA CCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEC NAALAPLISGIADPSLLEPPVNVLRLSLHPQGLAPRIANLPEWRAHLIDRLRQQVSASGD HHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCC PVLERLLKELLSYPVPEAANDAHTDHAGIAIPLKLSTKAGLLSLISTTTVFGTPVDITLS HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCHHHH ELAVESFFPADKKTAAILRTLSLN HHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure APTARPLGDHLREWRQRRRMSQLDLALEADISQRHLSFIESGRATPSRDMLLHLAERLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHC VPLRDRNPLLLAAGFAPVFTERALDDPALEPARRAIDMVLKAHQPFPALAIDRHWTLVAA CCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEC NAALAPLISGIADPSLLEPPVNVLRLSLHPQGLAPRIANLPEWRAHLIDRLRQQVSASGD HHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCC PVLERLLKELLSYPVPEAANDAHTDHAGIAIPLKLSTKAGLLSLISTTTVFGTPVDITLS HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCHHHH ELAVESFFPADKKTAAILRTLSLN HHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA