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The map label for this gene is fnrN [H]

Identifier: 209549711

GI number: 209549711

Start: 2177447

End: 2178169

Strand: Direct

Name: fnrN [H]

Synonym: Rleg2_2118

Alternate gene names: 209549711

Gene position: 2177447-2178169 (Clockwise)

Preceding gene: 209549703

Following gene: 209549720

Centisome position: 47.98

GC content: 63.49

Gene sequence:

>723_bases
ATGGACGTCGCACGCAGTGAGGTTCTCAAAGCCGGCACGCCTGTCGCTTGCCGTTCCTGCCAGGCGCGGCACGGCGTCGT
CTGTGGCGCCTTGTCGAGCAGCCAGCTGCGAGAACTCGGCCGCCATTCGCTGCGCCGCAAGGTCGATGCGGGCTCTGAGA
TCGTCGCTCAAGGGTCGGAAAGCTCTTTCTATTCGAACATCATGCGCGGGGTGGTGAAGCTCTGCAAGGTGATGCCGGAC
GGGCGCCAGCAGATCGTCGGCCTGCAATTTGCCCCCGATTTCGTCGGCAGGCCTTTCATGCGCGAGAGCACGCTGTCGGC
CGAGGCTGCGACCGATGCCGAAATCTGCTTCTTCCCTCGCAGCCTGCTCGACCGCATGATATCGGAGACGCCGGAATTGC
AGCGCAGCCTGCACGATCAGGCACTGAAGGAGCTCGATGCCGCGCGCGAATGGATGCTGACGCTCGGCCGGCGCACCGCC
GAGGAGAAGGTCGCAAGCCTGCTCCACCTCATCGCCACGCATGCCGAACCGCAAACGGCCACCAGCACCGCCTTCGATCT
GCCGCTATCGCGCGCCGAGATCGCCGATTTTCTCGGGCTGACGATCGAAACCGTCAGCCGCCAGTTAACCCGCCTGCGCA
AACAGGGCGTCATCCGCATCGAGAACATCCGGCATATCGTCGTCCCCGACATGGATGAGCTGGAAAAGAAGATCAGCGGG
TAA

Upstream 100 bases:

>100_bases
AATTGATAATCATCAAGCGCGGGAAGAAATCGGGATAGCCGAGCTCTCTCGCAGATGTCAGGTATGCCGGGGTATATCAG
GATTTCGAAGGGATCGGGAT

Downstream 100 bases:

>100_bases
TCACCACGCGGGTATTGGCAAGGCCGGCTTGGCGCGCCAGCGAGAAGAACTGGGCGGCATTGTCGGGGTGCAGTCGAACG
CAGCCATGCGAGGCCGGCCG

Product: Crp/Fnr family transcriptional regulator

Products: NA

Alternate protein names: ORF-240 [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDVARSEVLKAGTPVACRSCQARHGVVCGALSSSQLRELGRHSLRRKVDAGSEIVAQGSESSFYSNIMRGVVKLCKVMPD
GRQQIVGLQFAPDFVGRPFMRESTLSAEAATDAEICFFPRSLLDRMISETPELQRSLHDQALKELDAAREWMLTLGRRTA
EEKVASLLHLIATHAEPQTATSTAFDLPLSRAEIADFLGLTIETVSRQLTRLRKQGVIRIENIRHIVVPDMDELEKKISG

Sequences:

>Translated_240_residues
MDVARSEVLKAGTPVACRSCQARHGVVCGALSSSQLRELGRHSLRRKVDAGSEIVAQGSESSFYSNIMRGVVKLCKVMPD
GRQQIVGLQFAPDFVGRPFMRESTLSAEAATDAEICFFPRSLLDRMISETPELQRSLHDQALKELDAAREWMLTLGRRTA
EEKVASLLHLIATHAEPQTATSTAFDLPLSRAEIADFLGLTIETVSRQLTRLRKQGVIRIENIRHIVVPDMDELEKKISG
>Mature_240_residues
MDVARSEVLKAGTPVACRSCQARHGVVCGALSSSQLRELGRHSLRRKVDAGSEIVAQGSESSFYSNIMRGVVKLCKVMPD
GRQQIVGLQFAPDFVGRPFMRESTLSAEAATDAEICFFPRSLLDRMISETPELQRSLHDQALKELDAAREWMLTLGRRTA
EEKVASLLHLIATHAEPQTATSTAFDLPLSRAEIADFLGLTIETVSRQLTRLRKQGVIRIENIRHIVVPDMDELEKKISG

Specific function: Promotes the microaerobic and symbiotic induction of fixN, possibly by binding to the FNR consensus binding site upstream of fixN [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787595, Length=227, Percent_Identity=24.6696035242291, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 26569; Mature: 26569

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50042 CNMP_BINDING_3 ; PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVARSEVLKAGTPVACRSCQARHGVVCGALSSSQLRELGRHSLRRKVDAGSEIVAQGSE
CCCHHHHHHHCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCC
SSFYSNIMRGVVKLCKVMPDGRQQIVGLQFAPDFVGRPFMRESTLSAEAATDAEICFFPR
HHHHHHHHHHHHHHHHHCCCCHHHHCCCEECHHHHCCCCHHHHHCCHHHCCCCHHHHCCH
SLLDRMISETPELQRSLHDQALKELDAAREWMLTLGRRTAEEKVASLLHLIATHAEPQTA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
TSTAFDLPLSRAEIADFLGLTIETVSRQLTRLRKQGVIRIENIRHIVVPDMDELEKKISG
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHHHHHCC
>Mature Secondary Structure
MDVARSEVLKAGTPVACRSCQARHGVVCGALSSSQLRELGRHSLRRKVDAGSEIVAQGSE
CCCHHHHHHHCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCC
SSFYSNIMRGVVKLCKVMPDGRQQIVGLQFAPDFVGRPFMRESTLSAEAATDAEICFFPR
HHHHHHHHHHHHHHHHHCCCCHHHHCCCEECHHHHCCCCHHHHHCCHHHCCCCHHHHCCH
SLLDRMISETPELQRSLHDQALKELDAAREWMLTLGRRTAEEKVASLLHLIATHAEPQTA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
TSTAFDLPLSRAEIADFLGLTIETVSRQLTRLRKQGVIRIENIRHIVVPDMDELEKKISG
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2175385 [H]