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The map label for this gene is 209549701

Identifier: 209549701

GI number: 209549701

Start: 2168879

End: 2169670

Strand: Direct

Name: 209549701

Synonym: Rleg2_2108

Alternate gene names: NA

Gene position: 2168879-2169670 (Clockwise)

Preceding gene: 209549695

Following gene: 209549702

Centisome position: 47.79

GC content: 67.55

Gene sequence:

>792_bases
TTGGCACCGGAAAGACGAAAAGATACCGCGTTGCTCGCTGCCCGTGCCGGCCGCTACCGGGAATATGCGCCGCCGCTGAG
GCTGCGACACCATTTCAGCCGGTTCTGGTCGCATGCGCTCAATGACGGACCGCCGGCACAGGTGGCGATCGTGCCGGACG
GCTATTGCGACCTCCTCTGGATCGACGGCCGGCTGGCAGTCGCCGGGCCCGACAGGACGGCGGCCTTTCCCACTCTCCGG
CCGGGCACGACGGTCATCGGCGCACGTTTTGCGCCGGGCGCCGCTGCACCCTGGCTGAAGACGCCACTCTCGGCCCTGCT
CGGCCGCTCGGTGCCGCTTGCCGACATCGGCTGGAAGCACACGGCCGAATTCGAGGCACGGCTTGGCGATTGCCCCGATC
CAGCGGATGCCATGGCGCTATTCGGCCGCCTGCTCGAAGAGGCCGCGCGCGATGCGGACGAACCCGCTGAGGATGCCGCC
ATGATCTTCGCCGCCGCCGACAGCGGCCGCCCGGCGTCCGGGCTGCTCGACCGGCTCAGCATGAGCGAAAGGCAGCTGCG
TCGCCGTTGCCACCACCATTTCGGCTATGGCGCCAAGACGCTGGAACGGATCCGTCGGTTCCAGCGTTTCCTCGACCTCT
GCCGCAGGTCGGGCACGATGCCGCTTGCCCATCTTGCGCTCGAAGCGGGCTTTGCCGACCAAGCTCACATGACGCGTGAG
GTCGGCGAGCTCTCGGGGCTGACTCCTACCGCCATTCTTGGCCAACTCAGCATGCCGAAAAAACCAGGCTGA

Upstream 100 bases:

>100_bases
CGACAACCGCTTGTGCCGGCTGATTGTCAACCAAGTTTTCGCACGACCTGCCCTTGATGCCCTATCTGATGGTATTATCG
GCGTTTCGGGAGAGATCGCC

Downstream 100 bases:

>100_bases
CCGTTTTGTTCAAGACGCCGCGGATCGGCCTGTTATGACAGCAAGACCCAATATCGAGGACCTGCAAGCCATGTCGACGA
TGCCCGCGAAAATCATCCAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAPERRKDTALLAARAGRYREYAPPLRLRHHFSRFWSHALNDGPPAQVAIVPDGYCDLLWIDGRLAVAGPDRTAAFPTLR
PGTTVIGARFAPGAAAPWLKTPLSALLGRSVPLADIGWKHTAEFEARLGDCPDPADAMALFGRLLEEAARDADEPAEDAA
MIFAAADSGRPASGLLDRLSMSERQLRRRCHHHFGYGAKTLERIRRFQRFLDLCRRSGTMPLAHLALEAGFADQAHMTRE
VGELSGLTPTAILGQLSMPKKPG

Sequences:

>Translated_263_residues
MAPERRKDTALLAARAGRYREYAPPLRLRHHFSRFWSHALNDGPPAQVAIVPDGYCDLLWIDGRLAVAGPDRTAAFPTLR
PGTTVIGARFAPGAAAPWLKTPLSALLGRSVPLADIGWKHTAEFEARLGDCPDPADAMALFGRLLEEAARDADEPAEDAA
MIFAAADSGRPASGLLDRLSMSERQLRRRCHHHFGYGAKTLERIRRFQRFLDLCRRSGTMPLAHLALEAGFADQAHMTRE
VGELSGLTPTAILGQLSMPKKPG
>Mature_262_residues
APERRKDTALLAARAGRYREYAPPLRLRHHFSRFWSHALNDGPPAQVAIVPDGYCDLLWIDGRLAVAGPDRTAAFPTLRP
GTTVIGARFAPGAAAPWLKTPLSALLGRSVPLADIGWKHTAEFEARLGDCPDPADAMALFGRLLEEAARDADEPAEDAAM
IFAAADSGRPASGLLDRLSMSERQLRRRCHHHFGYGAKTLERIRRFQRFLDLCRRSGTMPLAHLALEAGFADQAHMTREV
GELSGLTPTAILGQLSMPKKPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28747; Mature: 28616

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPERRKDTALLAARAGRYREYAPPLRLRHHFSRFWSHALNDGPPAQVAIVPDGYCDLLW
CCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEE
IDGRLAVAGPDRTAAFPTLRPGTTVIGARFAPGAAAPWLKTPLSALLGRSVPLADIGWKH
ECCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
TAEFEARLGDCPDPADAMALFGRLLEEAARDADEPAEDAAMIFAAADSGRPASGLLDRLS
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCHHHHHHHHH
MSERQLRRRCHHHFGYGAKTLERIRRFQRFLDLCRRSGTMPLAHLALEAGFADQAHMTRE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
VGELSGLTPTAILGQLSMPKKPG
HHHHCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
APERRKDTALLAARAGRYREYAPPLRLRHHFSRFWSHALNDGPPAQVAIVPDGYCDLLW
CCCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEE
IDGRLAVAGPDRTAAFPTLRPGTTVIGARFAPGAAAPWLKTPLSALLGRSVPLADIGWKH
ECCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
TAEFEARLGDCPDPADAMALFGRLLEEAARDADEPAEDAAMIFAAADSGRPASGLLDRLS
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCHHHHHHHHH
MSERQLRRRCHHHFGYGAKTLERIRRFQRFLDLCRRSGTMPLAHLALEAGFADQAHMTRE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
VGELSGLTPTAILGQLSMPKKPG
HHHHCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]