| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ssuD [H]
Identifier: 209549663
GI number: 209549663
Start: 2130090
End: 2131265
Strand: Reverse
Name: ssuD [H]
Synonym: Rleg2_2070
Alternate gene names: 209549663
Gene position: 2131265-2130090 (Counterclockwise)
Preceding gene: 209549664
Following gene: 209549662
Centisome position: 46.97
GC content: 64.71
Gene sequence:
>1176_bases ATGACCGCCACATCCGATCCCATCAATTTCCTCTGGTTCATCCCGACGTCGGGCGACGGCACCTATCTCGGTTCCGCCGA TCTCAACCGCGCGCCCGAAATCGGCTATCTCACGCAGATCGCCCAGGCCGTCGATCGTCTCGGCTATTCCGGCGTGCTGC TGCCGACCGGGGTTGCCTGCGAGGAGTCCTTCGTGATGGCGGCGGCGCTCGCCGCCAAGACCGAGAAACTGCAGTTCCTG GTGGCGATCCGTCCCGGCACGGCGTCACCGGCCTATTACGCGCGTCTGGCAACGACGCTCGACCGTATTTCCAACGGCCG CCTGCTGCTTAACATCGTCGTCGGCGGCAGCCCGGCCGAGCTTGCCGGTGACGGCATCCATCTCGAGCATGACGAGCGTT ATGCCCATGCCGAGGAGTTTTTCACCGTTTTCGAGGAACTGCTGGATAAGGGAACGGCGAGTTTCGACGGCAAATATATC AAGGCGACCAATGCGCGCCTCGGCTTTCCCTCGGTGCAGAACCCGCGTCCGCCGCTCTATTTCGGCGGCTCGTCGGATGC CGGCATCGATTTCTCGGTCGGCCGCGTCGACAAGTATCTGACCTGGGGCGAGCCGCCGGCGCAGGTGGCGGAAAAGGTCG CCAAGGTGCGCAAGGCGGCGGCCGAGCGCGGCCGCGAGGTGAGCTTCGGCATCCGCCTGCACTTCATCGTGCGCGAAACC GACGAGGAGGCATGGGAGGCGGCGGAGCGGCTGATCCGTCATCTCGACGACGACACGATCCGCGAGGCGCAGGAGCGTTT CGTTCACGAGTCCGACTCGGTCGGCCAGAAGCGGATGGCCGCCCTTCACGGCGGCCGCCGTGACAAACTCGAGGTCTCGC CGAATCTTTGGGCCGGCGTCGGCCTGGTACGCGCTGGTGCCGGCACGGCGCTTGTGGGCTCGCCCAAGGCGGTGGCCGCA CGCCTTGCCGAATATCAGGACATCGGCATCGATACGGTGATCGGCTCCGGCTATCCGCACCTCGAAGAAGCCTATCGTGT CGCCGAACTGCTCTTCCCCGAACTCGGCATCACTCGCGAGCAACAGCGCCTGGCCTTCAACAACGAATTTGGCCGCAAGC AGGTTTTCGCAGGCGGCAGCCATGGCGGCAATCTGAAGGTCGTTTCCGGTTCCTGA
Upstream 100 bases:
>100_bases GGCGTGGCGGCGCGCAGCCACGTTCTGCACGTGGTCGCTTGCCAAGGCCAGCTAAACCGTGCGGGCCGATTTTCGAATTT CGCAGCAAAGGACCGTTTCC
Downstream 100 bases:
>100_bases GGTCGAACGAAGCGGGTAAGTCTGACAGCGCCGGAAGCCGCCCGCGGCTTTCGGCGTTCTGTTGCCAGGTTGACGTGCAG GTGCGTACGGCCATGCCCAT
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTATSDPINFLWFIPTSGDGTYLGSADLNRAPEIGYLTQIAQAVDRLGYSGVLLPTGVACEESFVMAAALAAKTEKLQFL VAIRPGTASPAYYARLATTLDRISNGRLLLNIVVGGSPAELAGDGIHLEHDERYAHAEEFFTVFEELLDKGTASFDGKYI KATNARLGFPSVQNPRPPLYFGGSSDAGIDFSVGRVDKYLTWGEPPAQVAEKVAKVRKAAAERGREVSFGIRLHFIVRET DEEAWEAAERLIRHLDDDTIREAQERFVHESDSVGQKRMAALHGGRRDKLEVSPNLWAGVGLVRAGAGTALVGSPKAVAA RLAEYQDIGIDTVIGSGYPHLEEAYRVAELLFPELGITREQQRLAFNNEFGRKQVFAGGSHGGNLKVVSGS
Sequences:
>Translated_391_residues MTATSDPINFLWFIPTSGDGTYLGSADLNRAPEIGYLTQIAQAVDRLGYSGVLLPTGVACEESFVMAAALAAKTEKLQFL VAIRPGTASPAYYARLATTLDRISNGRLLLNIVVGGSPAELAGDGIHLEHDERYAHAEEFFTVFEELLDKGTASFDGKYI KATNARLGFPSVQNPRPPLYFGGSSDAGIDFSVGRVDKYLTWGEPPAQVAEKVAKVRKAAAERGREVSFGIRLHFIVRET DEEAWEAAERLIRHLDDDTIREAQERFVHESDSVGQKRMAALHGGRRDKLEVSPNLWAGVGLVRAGAGTALVGSPKAVAA RLAEYQDIGIDTVIGSGYPHLEEAYRVAELLFPELGITREQQRLAFNNEFGRKQVFAGGSHGGNLKVVSGS >Mature_390_residues TATSDPINFLWFIPTSGDGTYLGSADLNRAPEIGYLTQIAQAVDRLGYSGVLLPTGVACEESFVMAAALAAKTEKLQFLV AIRPGTASPAYYARLATTLDRISNGRLLLNIVVGGSPAELAGDGIHLEHDERYAHAEEFFTVFEELLDKGTASFDGKYIK ATNARLGFPSVQNPRPPLYFGGSSDAGIDFSVGRVDKYLTWGEPPAQVAEKVAKVRKAAAERGREVSFGIRLHFIVRETD EEAWEAAERLIRHLDDDTIREAQERFVHESDSVGQKRMAALHGGRRDKLEVSPNLWAGVGLVRAGAGTALVGSPKAVAAR LAEYQDIGIDTVIGSGYPHLEEAYRVAELLFPELGITREQQRLAFNNEFGRKQVFAGGSHGGNLKVVSGS
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=350, Percent_Identity=59.7142857142857, Blast_Score=434, Evalue=1e-123, Organism=Escherichia coli, GI1787247, Length=198, Percent_Identity=31.8181818181818, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 42362; Mature: 42231
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATSDPINFLWFIPTSGDGTYLGSADLNRAPEIGYLTQIAQAVDRLGYSGVLLPTGVAC CCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC EESFVMAAALAAKTEKLQFLVAIRPGTASPAYYARLATTLDRISNGRLLLNIVVGGSPAE HHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH LAGDGIHLEHDERYAHAEEFFTVFEELLDKGTASFDGKYIKATNARLGFPSVQNPRPPLY HCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEE FGGSSDAGIDFSVGRVDKYLTWGEPPAQVAEKVAKVRKAAAERGREVSFGIRLHFIVRET ECCCCCCCCEEECCCHHHHEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECC DEEAWEAAERLIRHLDDDTIREAQERFVHESDSVGQKRMAALHGGRRDKLEVSPNLWAGV CHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHH GLVRAGAGTALVGSPKAVAARLAEYQDIGIDTVIGSGYPHLEEAYRVAELLFPELGITRE HHHCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCH QQRLAFNNEFGRKQVFAGGSHGGNLKVVSGS HHHHHHCCCCCCEEEEECCCCCCEEEEEECC >Mature Secondary Structure TATSDPINFLWFIPTSGDGTYLGSADLNRAPEIGYLTQIAQAVDRLGYSGVLLPTGVAC CCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC EESFVMAAALAAKTEKLQFLVAIRPGTASPAYYARLATTLDRISNGRLLLNIVVGGSPAE HHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH LAGDGIHLEHDERYAHAEEFFTVFEELLDKGTASFDGKYIKATNARLGFPSVQNPRPPLY HCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEE FGGSSDAGIDFSVGRVDKYLTWGEPPAQVAEKVAKVRKAAAERGREVSFGIRLHFIVRET ECCCCCCCCEEECCCHHHHEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECC DEEAWEAAERLIRHLDDDTIREAQERFVHESDSVGQKRMAALHGGRRDKLEVSPNLWAGV CHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHH GLVRAGAGTALVGSPKAVAARLAEYQDIGIDTVIGSGYPHLEEAYRVAELLFPELGITRE HHHCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCH QQRLAFNNEFGRKQVFAGGSHGGNLKVVSGS HHHHHHCCCCCCEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]