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The map label for this gene is nocM [H]

Identifier: 209549651

GI number: 209549651

Start: 2123245

End: 2124075

Strand: Direct

Name: nocM [H]

Synonym: Rleg2_2058

Alternate gene names: 209549651

Gene position: 2123245-2124075 (Clockwise)

Preceding gene: 209549650

Following gene: 209549652

Centisome position: 46.79

GC content: 61.97

Gene sequence:

>831_bases
ATGAGCTACGCCGAAACGCTGATCCCGCCGCAACCCGCACCTCGCGAAGTGATGAAGCCGATGACGCCGGCGCGTATGGC
CGGCTATATTTTCGTCGCCGCCTGGGCTGTATTCGGCGCGCTGCTGGTGATCTCCGTCGTCAACGGCTGGGATCCGGAAA
AATTCACCCGCTACGGACCGCGCTATCTCCACGGTCTCGGGGTCACGCTCAGCCTCGTTTTCATTTCCGTCATCTGCGGC
GCAGTTCTGTCGCTGCCGCTTGCCGCGGCGCGCATGTCGAAGAACCGGGTGCTGAATGCGCTCGCCTACGGCTATATCTA
TTTCTTCCGCGGCACACCGCTGCTGGCCCAACTGTTCCTGGTCTATTACGGCCTTGGCGTATTCCGGCCGCAGCTTGAGG
CCGTCGGCATCTGGTGGTTCTTCCGCGAAGCCTGGTATTGCGGCCTTTTTGCCATGACCATCAATACCGCGGCCTACCAG
GCGGAAATCCTGCGCGGCGCTATCGAAAGCGTACCGCACGGCCAGCACGAAGCGGCTGCAGCCCTCGGCATCCACAAGTT
CATCGCCTTCCGCAAGATCGTTCTGCCGCAGGCCCTCATCGTCGCGCTTCGCCCTTACGGCAACGAGATCATCCTGCTAA
TCAAGGGCTCGGCGGTCGTCGCCATCATCACCGTGCTCGACCTGATGGGCGAGACCCGCTATGCCTTCTCCCGCACCTTC
GACTACCAGACCTATCTCTGGGCAGCGATCTTCTACCTCGTCATCGTCGAGGCACTGCGCCATCTCTGGGCCTGGATCGA
GCGCCGCCTGACCCGGCATCTCAAGCGTTGA

Upstream 100 bases:

>100_bases
TTTATGGCCTGGCCTGCTGCCTTTATCTGGTGCTGGCCATTCTCTCCTCCTTTCTGCTCGTCTATGTCGAGCGCTGGGCC
AAGCGTTCGGAGATCCGCCG

Downstream 100 bases:

>100_bases
CGCCTGCGGTTCCGGCCTGGCAGCACTCTCGGCGCGATGCTGCCAAGTCGTTGATATCAAAAATAAATTGTCCTTTTATG
AAGTATCTGTAAAGCTTCCG

Product: polar amino acid ABC transporter inner membrane subunit

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSYAETLIPPQPAPREVMKPMTPARMAGYIFVAAWAVFGALLVISVVNGWDPEKFTRYGPRYLHGLGVTLSLVFISVICG
AVLSLPLAAARMSKNRVLNALAYGYIYFFRGTPLLAQLFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLFAMTINTAAYQ
AEILRGAIESVPHGQHEAAAALGIHKFIAFRKIVLPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTF
DYQTYLWAAIFYLVIVEALRHLWAWIERRLTRHLKR

Sequences:

>Translated_276_residues
MSYAETLIPPQPAPREVMKPMTPARMAGYIFVAAWAVFGALLVISVVNGWDPEKFTRYGPRYLHGLGVTLSLVFISVICG
AVLSLPLAAARMSKNRVLNALAYGYIYFFRGTPLLAQLFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLFAMTINTAAYQ
AEILRGAIESVPHGQHEAAAALGIHKFIAFRKIVLPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTF
DYQTYLWAAIFYLVIVEALRHLWAWIERRLTRHLKR
>Mature_275_residues
SYAETLIPPQPAPREVMKPMTPARMAGYIFVAAWAVFGALLVISVVNGWDPEKFTRYGPRYLHGLGVTLSLVFISVICGA
VLSLPLAAARMSKNRVLNALAYGYIYFFRGTPLLAQLFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLFAMTINTAAYQA
EILRGAIESVPHGQHEAAAALGIHKFIAFRKIVLPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFD
YQTYLWAAIFYLVIVEALRHLWAWIERRLTRHLKR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=36.6197183098592, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788645, Length=227, Percent_Identity=38.7665198237885, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=37.6744186046512, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=30.5309734513274, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=29.9539170506912, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786874, Length=196, Percent_Identity=30.6122448979592, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082239, Length=245, Percent_Identity=26.530612244898, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI48994930, Length=80, Percent_Identity=37.5, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=26.5402843601896, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31165; Mature: 31034

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYAETLIPPQPAPREVMKPMTPARMAGYIFVAAWAVFGALLVISVVNGWDPEKFTRYGP
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
RYLHGLGVTLSLVFISVICGAVLSLPLAAARMSKNRVLNALAYGYIYFFRGTPLLAQLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VYYGLGVFRPQLEAVGIWWFFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHEAAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ALGIHKFIAFRKIVLPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHCC
DYQTYLWAAIFYLVIVEALRHLWAWIERRLTRHLKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]