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The map label for this gene is yadT [C]

Identifier: 209549620

GI number: 209549620

Start: 2088473

End: 2089609

Strand: Direct

Name: yadT [C]

Synonym: Rleg2_2027

Alternate gene names: 209549620

Gene position: 2088473-2089609 (Clockwise)

Preceding gene: 209549618

Following gene: 209549621

Centisome position: 46.02

GC content: 60.42

Gene sequence:

>1137_bases
ATGAATTTCGTGAAAATGCTCGCAGTTTCCGCAGCTGCGATTGCCGGCTTGATGCCGCTTTCGGCCTGGGCGCAGTCCTT
TACCATCAAGGATGTGGCAGGCCGCGAAGTCAGCTTCGACAAGCCGGTCGAGCGTGTGATCCTTGGGGAAGGACGCATGC
TCTACGCCGTCGCGCCGATCGAGAAGGAAGATCCCTTCGCCAAGATCGTCGGCTGGCGCAACGATCTCTGGACCACCGAC
AAGGACGGTTTCAACGCCTATGTCGAGAAATTCCCCAAGGGCAAGGACCTGCCCTTTCTCGGCAATCTGACCGACGGCAC
GCTGCAGACCGAGACGGTCGTCAAGCTGCATCCCGACGTGCTGCTGCTGCCGATCGGCAACAAGACGGCAGCCGACGAGG
TGAAGCTCGAGGACATGCTCGCCGGCATCGGCGTCAAGATCGTCTATATCGATTTTCGCGAGCACATCCTCGCCAACACC
GAGCCGAGCCTGAAGATCCTCGGCAAGCTCTTCGGTCATGAGGACCGCGCCGAAGCCGTCGCGGCCTATTGGAAGGAGCA
GATGGCGCGGGTGACCGACAGGCTGAAGGCGGCCAATCCGCCAAAGCCGAACGTCTTCATGTACCGCGCCGCCGGCCTGG
TGGAATGCTGCGGCACCTTCGGTCCCGATAATTTCGGGCTGATGGTCGATTGGGCCGGCGGCCATAATCTCGGCTCCGAT
TTCCTGCCCGGCTATACCGGCTCGATCAATGCCGAGCAGGTCGTCGCTTCCAACCCCGATGTCATCGTCGTCACCGGCTC
CAACTGGAGCCAGACCAAGGACGCCAAGGACTTCGTCAATGTCGGCCCGAATGCCGCATCCACCTTCGGCGACAGCCGCA
AGGCGCTGAACACGCTGATGGAAAATGCGGCTTTCACCGGCTCCAGGGCGGTTGCCGGCGGCAATGTCCATGCGATCTGG
CATCAGTTTTATACCAGCCCCTATCAATTCGTCGCCGTCCAGCAACTCGCCAAGTGGTTCCACCCAAACCTCTTTGCCGA
TCTCGATCCGGATGCCACCTTCAAGGAATTCCACGAAAAATTCCTGCCGGTCGCCTATCAGCCGGGCTACTGGGTCGACG
CCAAGGCAGCTGAGTAA

Upstream 100 bases:

>100_bases
ATCGGATCAGTTTGGAAACGCTCTAAAACATATAACTTGATTCACAAAGTCATATTTCTTATGCCTGCGGACATTATTCA
GACGTCAGGGGAATTTCCAG

Downstream 100 bases:

>100_bases
AACAGGATGGCCGAGATCGCCGCCATATCGATCGAAGCCGAAGCCGGGAGGGAGCGCTACCGCGCGCTCGCCCGGCGCAA
GCTGTTGATCCTCGCCGCCA

Product: periplasmic binding protein

Products: NA

Alternate protein names: Ferrichrome/Ferrioxamine B Periplasmic Transporter; Iron Transporter; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; ABC-Type Transport System Periplasmic Component; Iron(III) ABC Transporter; Ferrisiderophore Receptor Irp6A; Lipopolysaccharide Biosynthesis Protein; Copper Amine Oxidase Domain Protein; Iron(III)-Siderophore ABC Transporter Periplasmic Subunit; Copper Amine Oxidase Domain-Containing Protein

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNFVKMLAVSAAAIAGLMPLSAWAQSFTIKDVAGREVSFDKPVERVILGEGRMLYAVAPIEKEDPFAKIVGWRNDLWTTD
KDGFNAYVEKFPKGKDLPFLGNLTDGTLQTETVVKLHPDVLLLPIGNKTAADEVKLEDMLAGIGVKIVYIDFREHILANT
EPSLKILGKLFGHEDRAEAVAAYWKEQMARVTDRLKAANPPKPNVFMYRAAGLVECCGTFGPDNFGLMVDWAGGHNLGSD
FLPGYTGSINAEQVVASNPDVIVVTGSNWSQTKDAKDFVNVGPNAASTFGDSRKALNTLMENAAFTGSRAVAGGNVHAIW
HQFYTSPYQFVAVQQLAKWFHPNLFADLDPDATFKEFHEKFLPVAYQPGYWVDAKAAE

Sequences:

>Translated_378_residues
MNFVKMLAVSAAAIAGLMPLSAWAQSFTIKDVAGREVSFDKPVERVILGEGRMLYAVAPIEKEDPFAKIVGWRNDLWTTD
KDGFNAYVEKFPKGKDLPFLGNLTDGTLQTETVVKLHPDVLLLPIGNKTAADEVKLEDMLAGIGVKIVYIDFREHILANT
EPSLKILGKLFGHEDRAEAVAAYWKEQMARVTDRLKAANPPKPNVFMYRAAGLVECCGTFGPDNFGLMVDWAGGHNLGSD
FLPGYTGSINAEQVVASNPDVIVVTGSNWSQTKDAKDFVNVGPNAASTFGDSRKALNTLMENAAFTGSRAVAGGNVHAIW
HQFYTSPYQFVAVQQLAKWFHPNLFADLDPDATFKEFHEKFLPVAYQPGYWVDAKAAE
>Mature_378_residues
MNFVKMLAVSAAAIAGLMPLSAWAQSFTIKDVAGREVSFDKPVERVILGEGRMLYAVAPIEKEDPFAKIVGWRNDLWTTD
KDGFNAYVEKFPKGKDLPFLGNLTDGTLQTETVVKLHPDVLLLPIGNKTAADEVKLEDMLAGIGVKIVYIDFREHILANT
EPSLKILGKLFGHEDRAEAVAAYWKEQMARVTDRLKAANPPKPNVFMYRAAGLVECCGTFGPDNFGLMVDWAGGHNLGSD
FLPGYTGSINAEQVVASNPDVIVVTGSNWSQTKDAKDFVNVGPNAASTFGDSRKALNTLMENAAFTGSRAVAGGNVHAIW
HQFYTSPYQFVAVQQLAKWFHPNLFADLDPDATFKEFHEKFLPVAYQPGYWVDAKAAE

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41480; Mature: 41480

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVKMLAVSAAAIAGLMPLSAWAQSFTIKDVAGREVSFDKPVERVILGEGRMLYAVAPI
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEHHCCCCCCCCCCCHHHHEECCCCEEEEECCC
EKEDPFAKIVGWRNDLWTTDKDGFNAYVEKFPKGKDLPFLGNLTDGTLQTETVVKLHPDV
CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCEECCEEEEECCCE
LLLPIGNKTAADEVKLEDMLAGIGVKIVYIDFREHILANTEPSLKILGKLFGHEDRAEAV
EEEECCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
AAYWKEQMARVTDRLKAANPPKPNVFMYRAAGLVECCGTFGPDNFGLMVDWAGGHNLGSD
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCC
FLPGYTGSINAEQVVASNPDVIVVTGSNWSQTKDAKDFVNVGPNAASTFGDSRKALNTLM
CCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHCCCHHHHHHHHH
ENAAFTGSRAVAGGNVHAIWHQFYTSPYQFVAVQQLAKWFHPNLFADLDPDATFKEFHEK
HHHCCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHH
FLPVAYQPGYWVDAKAAE
HCCEEECCCCEECCCCCC
>Mature Secondary Structure
MNFVKMLAVSAAAIAGLMPLSAWAQSFTIKDVAGREVSFDKPVERVILGEGRMLYAVAPI
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEHHCCCCCCCCCCCHHHHEECCCCEEEEECCC
EKEDPFAKIVGWRNDLWTTDKDGFNAYVEKFPKGKDLPFLGNLTDGTLQTETVVKLHPDV
CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCEECCEEEEECCCE
LLLPIGNKTAADEVKLEDMLAGIGVKIVYIDFREHILANTEPSLKILGKLFGHEDRAEAV
EEEECCCCCCCHHHHHHHHHHCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
AAYWKEQMARVTDRLKAANPPKPNVFMYRAAGLVECCGTFGPDNFGLMVDWAGGHNLGSD
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCCCCCCEEEECCCCCCCCCC
FLPGYTGSINAEQVVASNPDVIVVTGSNWSQTKDAKDFVNVGPNAASTFGDSRKALNTLM
CCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHCCCHHHHHHHHH
ENAAFTGSRAVAGGNVHAIWHQFYTSPYQFVAVQQLAKWFHPNLFADLDPDATFKEFHEK
HHHCCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHH
FLPVAYQPGYWVDAKAAE
HCCEEECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA