| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549597
Identifier: 209549597
GI number: 209549597
Start: 2063397
End: 2063927
Strand: Direct
Name: 209549597
Synonym: Rleg2_2004
Alternate gene names: NA
Gene position: 2063397-2063927 (Clockwise)
Preceding gene: 209549593
Following gene: 209549599
Centisome position: 45.47
GC content: 60.45
Gene sequence:
>531_bases ATGTCTAATCTTTCGAACTTCATGCACCATCATTTCGACAAGCCGGCCGACGAACTCGGCGACATCGAAAAACGCGTGCT GGCGAAGGCGCACGAGCGCAAGGTCATCTCGACCGATGTCAACGCGGCTCTTTCCGCCGAGGCTTCGTTCGGCGAGCGTG TCGCCGATGGAATTGCCCGTGTCGGCGGCTCCTGGTCTTTCATCCTCGCCTTTCTAGCCTTCCTCGTCGTCTGGACGCTG ATCAACACCATCATCCTGGCGACCGGCGCTTTCGACCCCTACCCCTTTGTCTTCCTCAACCTGATCCTGTCGATGCTCGC CGCCATCCAAGCGCCGATCATCATGATGTCGCAGAACCGCCAGGCCGAACGCGACCGCTTCGAGGCCGCCAAAGATTACG AAGTCAATCTCAAGGCCGAACTTGAAGTGCTCTCCCTGCACCAGAAGATCGACATGCGCGTGCTGACCGAGCTGACGGCG CTGCGCGAGGACGTCGCCCGCCTCAGCGCCGAGCTTTCCGCCAGGGGCTAA
Upstream 100 bases:
>100_bases GCTACGGCCTCGCGGCATAGACACGCATTGCAATTTGTTGGAGGAGCGGAATACTGCCCCCAAAAGCGACTGCATCGATA ACGGGCACCGGAAACAGGCC
Downstream 100 bases:
>100_bases GCGTGTCGTGCAGAAGTGTGCAGCGGTTTTCCCAAGCAAAGCGCGAAGCGCCTTTGCCACAACGACGTGCGTAAAAACAA AGACCTAAAGCGCGAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSNLSNFMHHHFDKPADELGDIEKRVLAKAHERKVISTDVNAALSAEASFGERVADGIARVGGSWSFILAFLAFLVVWTL INTIILATGAFDPYPFVFLNLILSMLAAIQAPIIMMSQNRQAERDRFEAAKDYEVNLKAELEVLSLHQKIDMRVLTELTA LREDVARLSAELSARG
Sequences:
>Translated_176_residues MSNLSNFMHHHFDKPADELGDIEKRVLAKAHERKVISTDVNAALSAEASFGERVADGIARVGGSWSFILAFLAFLVVWTL INTIILATGAFDPYPFVFLNLILSMLAAIQAPIIMMSQNRQAERDRFEAAKDYEVNLKAELEVLSLHQKIDMRVLTELTA LREDVARLSAELSARG >Mature_175_residues SNLSNFMHHHFDKPADELGDIEKRVLAKAHERKVISTDVNAALSAEASFGERVADGIARVGGSWSFILAFLAFLVVWTLI NTIILATGAFDPYPFVFLNLILSMLAAIQAPIIMMSQNRQAERDRFEAAKDYEVNLKAELEVLSLHQKIDMRVLTELTAL REDVARLSAELSARG
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19600; Mature: 19469
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLSNFMHHHFDKPADELGDIEKRVLAKAHERKVISTDVNAALSAEASFGERVADGIAR CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGSWSFILAFLAFLVVWTLINTIILATGAFDPYPFVFLNLILSMLAAIQAPIIMMSQNR HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCC QAERDRFEAAKDYEVNLKAELEVLSLHQKIDMRVLTELTALREDVARLSAELSARG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNLSNFMHHHFDKPADELGDIEKRVLAKAHERKVISTDVNAALSAEASFGERVADGIAR CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGGSWSFILAFLAFLVVWTLINTIILATGAFDPYPFVFLNLILSMLAAIQAPIIMMSQNR HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCC QAERDRFEAAKDYEVNLKAELEVLSLHQKIDMRVLTELTALREDVARLSAELSARG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA