Click here to switch to the map view.

The map label for this gene is ycjF [C]

Identifier: 209549561

GI number: 209549561

Start: 2015544

End: 2016623

Strand: Direct

Name: ycjF [C]

Synonym: Rleg2_1967

Alternate gene names: 209549561

Gene position: 2015544-2016623 (Clockwise)

Preceding gene: 209549560

Following gene: 209549562

Centisome position: 44.42

GC content: 67.31

Gene sequence:

>1080_bases
ATGAGCAAGCCCCCCTCCGATCCGCCACGTCGCCCGCCCGCAGCTTTCACCTATGAGGACGAGGCCACCGAGCGCCATGA
CAACGGCCGCCAGGCAGAGCGTCGGCGCAAGCCGGAAAGCTTCTCCGAAAACATCGTCGTGACGGCGGATGAGGACGATC
CCTTCCTCAATCCCGACAAGGATCTGAGCGCGGTGCCCGTGGCAACGCCGCTGAGACGCCGAACCTCCTTCGGCAAGATC
GCCGCCGGCGCCTTCGGCATCCTGCTGTCACTTGGCATCGGCCTCTGGACCGATAGCCTGATCCGCGATCTCTTCACCCG
CGCCGACTGGTTGGGTTATCTGGCCCTTGCCGTGCTCGCGGTCGGCGTCCTCGCCGTGCTTGCCCTCGTCATCCGCGAGA
CGTCAGGCATGATGCGCCTTGCCGCCGTCCAGGCGATCAAGGCCGAGGCGGAAGCCGCGATGGTCGAAACCCGGCCGGCG
AAGGCGCGCGCCGTCGTCGCCCGCCTCGTCACGCTGCTTTCGGCCAATCCCGAGACATCGAAGGGCCGCGCCACGCTGAA
GGCAACGGAAGGCGAGGTCATCGATCCCCCGCATCTGATTGCGCTCGCCGAACGGGAATTGCTGACGCCGCTCGACCGCA
AGGCCCGTGCCCTGATCGTCAATGCCTCAAAGCGCGTCTCGCTCGTCACCGCCGTCAGCCCGCGCGCAGTGGTCGACCTG
CTCTATGTGCTCTATGAGGCCGTGCGCCTCATCCGCGCCATGGCAGAGCTTTACGGCGGTCGTCCCGGCACGCTCGGCAT
GTTCCGCCTGCTGCGCGACGTGCTGGCGCATCTGGCCGTCACCGGCTCGATCGCCGTCGGCGACAGCCTCGTCCAGCAGG
TGCTCGGCCATGGGCTGGCCTCCAAGCTCTCGGCCCGGCTCGGCGAAGGCGTCATCAACGGCCTGATGACCGCCCGCATT
GGAATCGCGGCGATGGATCTCTGCCGCCCGCTTGCCTTCCATGCCCTGAAGCGGCCGGGAATCGGCGATTTTATCGGCGA
TCTCACGCCCTCCATGTCGCCGCGCGGCAACACTCCCTGA

Upstream 100 bases:

>100_bases
GTCCGCCGCAGCTCGAGGAAACCGGCGGCGGCATCAAGCTGTCGGTGCCGCATATCCGCCTCGACCGCGCCATGCAGTTC
CTGTTCGGAGATCGTCTCGC

Downstream 100 bases:

>100_bases
GAGACAGGGTAATTCCGCAGCCCTTGCCATCCCTAACGTAATGTTGGCGAAATTACAGCAAATTCAAGACTATAACGACG
ATATACTGAAATCGGAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSKPPSDPPRRPPAAFTYEDEATERHDNGRQAERRRKPESFSENIVVTADEDDPFLNPDKDLSAVPVATPLRRRTSFGKI
AAGAFGILLSLGIGLWTDSLIRDLFTRADWLGYLALAVLAVGVLAVLALVIRETSGMMRLAAVQAIKAEAEAAMVETRPA
KARAVVARLVTLLSANPETSKGRATLKATEGEVIDPPHLIALAERELLTPLDRKARALIVNASKRVSLVTAVSPRAVVDL
LYVLYEAVRLIRAMAELYGGRPGTLGMFRLLRDVLAHLAVTGSIAVGDSLVQQVLGHGLASKLSARLGEGVINGLMTARI
GIAAMDLCRPLAFHALKRPGIGDFIGDLTPSMSPRGNTP

Sequences:

>Translated_359_residues
MSKPPSDPPRRPPAAFTYEDEATERHDNGRQAERRRKPESFSENIVVTADEDDPFLNPDKDLSAVPVATPLRRRTSFGKI
AAGAFGILLSLGIGLWTDSLIRDLFTRADWLGYLALAVLAVGVLAVLALVIRETSGMMRLAAVQAIKAEAEAAMVETRPA
KARAVVARLVTLLSANPETSKGRATLKATEGEVIDPPHLIALAERELLTPLDRKARALIVNASKRVSLVTAVSPRAVVDL
LYVLYEAVRLIRAMAELYGGRPGTLGMFRLLRDVLAHLAVTGSIAVGDSLVQQVLGHGLASKLSARLGEGVINGLMTARI
GIAAMDLCRPLAFHALKRPGIGDFIGDLTPSMSPRGNTP
>Mature_358_residues
SKPPSDPPRRPPAAFTYEDEATERHDNGRQAERRRKPESFSENIVVTADEDDPFLNPDKDLSAVPVATPLRRRTSFGKIA
AGAFGILLSLGIGLWTDSLIRDLFTRADWLGYLALAVLAVGVLAVLALVIRETSGMMRLAAVQAIKAEAEAAMVETRPAK
ARAVVARLVTLLSANPETSKGRATLKATEGEVIDPPHLIALAERELLTPLDRKARALIVNASKRVSLVTAVSPRAVVDLL
YVLYEAVRLIRAMAELYGGRPGTLGMFRLLRDVLAHLAVTGSIAVGDSLVQQVLGHGLASKLSARLGEGVINGLMTARIG
IAAMDLCRPLAFHALKRPGIGDFIGDLTPSMSPRGNTP

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family

Homologues:

Organism=Escherichia coli, GI1787582, Length=344, Percent_Identity=26.7441860465116, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1967_RHILW (B5ZRH1)

Other databases:

- EMBL:   CP001191
- RefSeq:   YP_002281478.1
- GeneID:   6980706
- GenomeReviews:   CP001191_GR
- KEGG:   rlt:Rleg2_1967
- HOGENOM:   HBG466177
- OMA:   IAHLAIT
- ProtClustDB:   PRK05415
- HAMAP:   MF_01085
- InterPro:   IPR021147
- InterPro:   IPR006507
- TIGRFAMs:   TIGR01620

Pfam domain/function: PF05128 DUF697

EC number: NA

Molecular weight: Translated: 38466; Mature: 38335

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a3d54e8)-; HASH(0x1bd877a0)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPPSDPPRRPPAAFTYEDEATERHDNGRQAERRRKPESFSENIVVTADEDDPFLNPDK
CCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
DLSAVPVATPLRRRTSFGKIAAGAFGILLSLGIGLWTDSLIRDLFTRADWLGYLALAVLA
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVLAVLALVIRETSGMMRLAAVQAIKAEAEAAMVETRPAKARAVVARLVTLLSANPETS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
KGRATLKATEGEVIDPPHLIALAERELLTPLDRKARALIVNASKRVSLVTAVSPRAVVDL
CCCEEEEECCCCCCCCCHHHHHHHHHHHCHHHHCCCEEEEECCCCEEEEEECCHHHHHHH
LYVLYEAVRLIRAMAELYGGRPGTLGMFRLLRDVLAHLAVTGSIAVGDSLVQQVLGHGLA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
SKLSARLGEGVINGLMTARIGIAAMDLCRPLAFHALKRPGIGDFIGDLTPSMSPRGNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCH
>Mature Secondary Structure 
SKPPSDPPRRPPAAFTYEDEATERHDNGRQAERRRKPESFSENIVVTADEDDPFLNPDK
CCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
DLSAVPVATPLRRRTSFGKIAAGAFGILLSLGIGLWTDSLIRDLFTRADWLGYLALAVLA
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVLAVLALVIRETSGMMRLAAVQAIKAEAEAAMVETRPAKARAVVARLVTLLSANPETS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
KGRATLKATEGEVIDPPHLIALAERELLTPLDRKARALIVNASKRVSLVTAVSPRAVVDL
CCCEEEEECCCCCCCCCHHHHHHHHHHHCHHHHCCCEEEEECCCCEEEEEECCHHHHHHH
LYVLYEAVRLIRAMAELYGGRPGTLGMFRLLRDVLAHLAVTGSIAVGDSLVQQVLGHGLA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
SKLSARLGEGVINGLMTARIGIAAMDLCRPLAFHALKRPGIGDFIGDLTPSMSPRGNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA