| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is grxC2 [H]
Identifier: 209549533
GI number: 209549533
Start: 1983305
End: 1983640
Strand: Direct
Name: grxC2 [H]
Synonym: Rleg2_1939
Alternate gene names: 209549533
Gene position: 1983305-1983640 (Clockwise)
Preceding gene: 209549532
Following gene: 209549534
Centisome position: 43.7
GC content: 56.55
Gene sequence:
>336_bases ATGAGCGGCATTCACGAATTCATCGACAACGAAATCAAGAGCAACGACGTCGTCCTCTTCATGAAGGGCACGCCGCAGTT TCCGCAGTGCGGTTTCTCCGGGCAGGTCGTGCAGATTCTTGATTACATCGGTGTCGATTACAAAGGCGTCAACGTGCTCG CCGATTCGGAGATCCGCCAAGGGATCAAGGAATATTCCAACTGGCCGACGATCCCGCAGCTTTACATCAAGGGTGAGTTT GTCGGCGGCTGCGATATCGTCCGGGAAATGTTCCAGGCCGGTGAGCTGCAGCAGCATCTCCAGGAAAACGGCATCACCGT GCGCGGCGCCGCCTGA
Upstream 100 bases:
>100_bases TTTTGGTTGGGGCGGCTGGAATTCCTGCCGTCGCATGCTATCTAAAGGCAACGATTGAAACGGCGGGCCTTTAACCCGCC TGTTGAAAGGATCAGGTCCT
Downstream 100 bases:
>100_bases CCGGTCACCGGGCGTCCGCCCGGTTTCCAAATCTGTAATCTTGAGACCGAGGCGCTGCGGCTAGCAGCGCCTTAGCCTGT TTATGGGAATTTCATTGTGA
Product: glutaredoxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSGIHEFIDNEIKSNDVVLFMKGTPQFPQCGFSGQVVQILDYIGVDYKGVNVLADSEIRQGIKEYSNWPTIPQLYIKGEF VGGCDIVREMFQAGELQQHLQENGITVRGAA
Sequences:
>Translated_111_residues MSGIHEFIDNEIKSNDVVLFMKGTPQFPQCGFSGQVVQILDYIGVDYKGVNVLADSEIRQGIKEYSNWPTIPQLYIKGEF VGGCDIVREMFQAGELQQHLQENGITVRGAA >Mature_110_residues SGIHEFIDNEIKSNDVVLFMKGTPQFPQCGFSGQVVQILDYIGVDYKGVNVLADSEIRQGIKEYSNWPTIPQLYIKGEFV GGCDIVREMFQAGELQQHLQENGITVRGAA
Specific function: Unknown
COG id: COG0278
COG function: function code O; Glutaredoxin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42516576, Length=101, Percent_Identity=60.3960396039604, Blast_Score=127, Evalue=3e-30, Organism=Homo sapiens, GI95113651, Length=80, Percent_Identity=58.75, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1787943, Length=109, Percent_Identity=46.7889908256881, Blast_Score=115, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17556042, Length=103, Percent_Identity=52.4271844660194, Blast_Score=118, Evalue=6e-28, Organism=Caenorhabditis elegans, GI71988159, Length=100, Percent_Identity=41, Blast_Score=98, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71988153, Length=100, Percent_Identity=41, Blast_Score=98, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6325198, Length=102, Percent_Identity=52.9411764705882, Blast_Score=118, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320303, Length=92, Percent_Identity=46.7391304347826, Blast_Score=90, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6321022, Length=78, Percent_Identity=48.7179487179487, Blast_Score=89, Evalue=1e-19, Organism=Drosophila melanogaster, GI24642023, Length=98, Percent_Identity=53.0612244897959, Blast_Score=121, Evalue=8e-29, Organism=Drosophila melanogaster, GI19921242, Length=98, Percent_Identity=40.8163265306122, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002109 - InterPro: IPR014434 - InterPro: IPR004480 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 12367; Mature: 12236
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIHEFIDNEIKSNDVVLFMKGTPQFPQCGFSGQVVQILDYIGVDYKGVNVLADSEIRQ CCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECHHHHH GIKEYSNWPTIPQLYIKGEFVGGCDIVREMFQAGELQQHLQENGITVRGAA HHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECC >Mature Secondary Structure SGIHEFIDNEIKSNDVVLFMKGTPQFPQCGFSGQVVQILDYIGVDYKGVNVLADSEIRQ CHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECHHHHH GIKEYSNWPTIPQLYIKGEFVGGCDIVREMFQAGELQQHLQENGITVRGAA HHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]