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The map label for this gene is yebA [H]

Identifier: 209549506

GI number: 209549506

Start: 1958884

End: 1960203

Strand: Direct

Name: yebA [H]

Synonym: Rleg2_1912

Alternate gene names: 209549506

Gene position: 1958884-1960203 (Clockwise)

Preceding gene: 209549505

Following gene: 209549507

Centisome position: 43.17

GC content: 64.62

Gene sequence:

>1320_bases
GTGAACAGCGGACATCAGCACCGGGTATTCGGCAGGCGGGCGCAGGAACATATCCTGATCCTCGCAAGCGGCGACAAGGT
CCGCCACATGACGGTCCGGCCGTGGATGGCCGCTCTCGCCTTCTGCTTCATCGGCGTCTTCTCGATCGGCTATCTGCTGG
CCACCTCCTATCTCGTGCTGCGCGACGACTTGATCGGCGCCACCATGGCGCGGCAAGCCCGCATGCAGCACGACTACGAA
GACCGCATCGCCGCCCTTCGCGCCCAGGTCGACCGCATCACCTCCCGCCAGCTTCTCGACCAGCAGGTGGTCGAGGATAA
GGTCGACAAGCTGATGGAACAGCAGATGGCGCTCACGTCGCGCCATGGCAAACTCGACAATCTGCTCGACCGGGCCGAAA
GCTCCGGGCTGACGGATAGGGACGGCGCCCTGCCCGCGCCGTCTTCGCCCGCCCAGTCCTATGCCCCCGATACCAAGGAC
AAACGCGCTTCGCTGACCGGCGGCGGCATCGAGGCGATCGAAAAACAGCTGGCGATCGGCGCGCCCGCCGATGCGACGCC
CGATAATTCGACACTCGCCTATGTGCCGTCCGCCGAGACGGTCGGCGACCGCGCCGACCGCATCTTCTCAAACGTGACGC
TGTCGCTGAAGGGCGTCGAACAGGACCAGCGCAACCGCGTCGAACAGCTGACGAGCGACGCCGGCACTGCCGCCAATGCC
ATCGGCAACGTGCTGACCCGCTTCAAAATTCCGGTGCCCGAGGAGACTGCGGCGCGGCAGGACGACGATGCCGTCGGCGG
CCCCTATGTCGAGCCCGAAAGCAACGACGATTTCAACAATTCACTGGCAGCGCTCGACGGCGCGCTGACCCGGCTGGAGG
CCGTGCGCAGCACCGCCGAATCCCTACCCTTTCGCAATCCAGCCATCGGCAAGGACGTGACCAGCCCCTTCGGCAATCGC
CGCGACCCTTTCCTCGGCCGCCTCGCGCTGCATTCCGGCATCGATTTCCGCTTTTCGCCGGGTGAAAAGATCCGCCCGTC
GGCGCCGGGCAAAGTCATATCAGCTGGCTGGACCGGCGGTTACGGCAATATGGTCGAAGTCGATCACGGCAATGGCATCT
CGACGCGCTACGGCCATATGTCCCAGGTGCTGGTCAAGGTCGGCGACACGGTCGGCCGCAGCGACGTCATCGGCCTTGCC
GGCAGCACCGGCCGCTCGACCGGCACGCATCTGCACTATGAAGTGCGCCAGGACGGCCACGCGGTCGATCCAGTATATTT
CATGAATGCCGGCCTTAAACTCGCCACCTATATCAAGTAA

Upstream 100 bases:

>100_bases
TGGTATTTTCTACACGGACAGCGACAAAGAAAGCATTCGTTAACCATAAACGTGTCTAATTTTCCGAAAGAGGCGTAGTG
CATCAGTCGGGAGAGCCTGC

Downstream 100 bases:

>100_bases
CACCCGTCGGGTAACCATCGCTTCACTCTGTACGGGGTGCAGCCTCTCTATTTCTTGACTTGCCGGCCATTCGGAGCTAT
GTCGCGCTGCATTGCGGCAT

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNSGHQHRVFGRRAQEHILILASGDKVRHMTVRPWMAALAFCFIGVFSIGYLLATSYLVLRDDLIGATMARQARMQHDYE
DRIAALRAQVDRITSRQLLDQQVVEDKVDKLMEQQMALTSRHGKLDNLLDRAESSGLTDRDGALPAPSSPAQSYAPDTKD
KRASLTGGGIEAIEKQLAIGAPADATPDNSTLAYVPSAETVGDRADRIFSNVTLSLKGVEQDQRNRVEQLTSDAGTAANA
IGNVLTRFKIPVPEETAARQDDDAVGGPYVEPESNDDFNNSLAALDGALTRLEAVRSTAESLPFRNPAIGKDVTSPFGNR
RDPFLGRLALHSGIDFRFSPGEKIRPSAPGKVISAGWTGGYGNMVEVDHGNGISTRYGHMSQVLVKVGDTVGRSDVIGLA
GSTGRSTGTHLHYEVRQDGHAVDPVYFMNAGLKLATYIK

Sequences:

>Translated_439_residues
MNSGHQHRVFGRRAQEHILILASGDKVRHMTVRPWMAALAFCFIGVFSIGYLLATSYLVLRDDLIGATMARQARMQHDYE
DRIAALRAQVDRITSRQLLDQQVVEDKVDKLMEQQMALTSRHGKLDNLLDRAESSGLTDRDGALPAPSSPAQSYAPDTKD
KRASLTGGGIEAIEKQLAIGAPADATPDNSTLAYVPSAETVGDRADRIFSNVTLSLKGVEQDQRNRVEQLTSDAGTAANA
IGNVLTRFKIPVPEETAARQDDDAVGGPYVEPESNDDFNNSLAALDGALTRLEAVRSTAESLPFRNPAIGKDVTSPFGNR
RDPFLGRLALHSGIDFRFSPGEKIRPSAPGKVISAGWTGGYGNMVEVDHGNGISTRYGHMSQVLVKVGDTVGRSDVIGLA
GSTGRSTGTHLHYEVRQDGHAVDPVYFMNAGLKLATYIK
>Mature_439_residues
MNSGHQHRVFGRRAQEHILILASGDKVRHMTVRPWMAALAFCFIGVFSIGYLLATSYLVLRDDLIGATMARQARMQHDYE
DRIAALRAQVDRITSRQLLDQQVVEDKVDKLMEQQMALTSRHGKLDNLLDRAESSGLTDRDGALPAPSSPAQSYAPDTKD
KRASLTGGGIEAIEKQLAIGAPADATPDNSTLAYVPSAETVGDRADRIFSNVTLSLKGVEQDQRNRVEQLTSDAGTAANA
IGNVLTRFKIPVPEETAARQDDDAVGGPYVEPESNDDFNNSLAALDGALTRLEAVRSTAESLPFRNPAIGKDVTSPFGNR
RDPFLGRLALHSGIDFRFSPGEKIRPSAPGKVISAGWTGGYGNMVEVDHGNGISTRYGHMSQVLVKVGDTVGRSDVIGLA
GSTGRSTGTHLHYEVRQDGHAVDPVYFMNAGLKLATYIK

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=43.859649122807, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87082297, Length=138, Percent_Identity=32.6086956521739, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 47479; Mature: 47479

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGHQHRVFGRRAQEHILILASGDKVRHMTVRPWMAALAFCFIGVFSIGYLLATSYLVL
CCCCCCCHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDDLIGATMARQARMQHDYEDRIAALRAQVDRITSRQLLDQQVVEDKVDKLMEQQMALTS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGKLDNLLDRAESSGLTDRDGALPAPSSPAQSYAPDTKDKRASLTGGGIEAIEKQLAIG
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
APADATPDNSTLAYVPSAETVGDRADRIFSNVTLSLKGVEQDQRNRVEQLTSDAGTAANA
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCHHHHH
IGNVLTRFKIPVPEETAARQDDDAVGGPYVEPESNDDFNNSLAALDGALTRLEAVRSTAE
HHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLPFRNPAIGKDVTSPFGNRRDPFLGRLALHSGIDFRFSPGEKIRPSAPGKVISAGWTGG
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCCC
YGNMVEVDHGNGISTRYGHMSQVLVKVGDTVGRSDVIGLAGSTGRSTGTHLHYEVRQDGH
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC
AVDPVYFMNAGLKLATYIK
CCCCCHHHCCCCEEEECCC
>Mature Secondary Structure
MNSGHQHRVFGRRAQEHILILASGDKVRHMTVRPWMAALAFCFIGVFSIGYLLATSYLVL
CCCCCCCHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDDLIGATMARQARMQHDYEDRIAALRAQVDRITSRQLLDQQVVEDKVDKLMEQQMALTS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGKLDNLLDRAESSGLTDRDGALPAPSSPAQSYAPDTKDKRASLTGGGIEAIEKQLAIG
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
APADATPDNSTLAYVPSAETVGDRADRIFSNVTLSLKGVEQDQRNRVEQLTSDAGTAANA
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCHHHHH
IGNVLTRFKIPVPEETAARQDDDAVGGPYVEPESNDDFNNSLAALDGALTRLEAVRSTAE
HHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLPFRNPAIGKDVTSPFGNRRDPFLGRLALHSGIDFRFSPGEKIRPSAPGKVISAGWTGG
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCCC
YGNMVEVDHGNGISTRYGHMSQVLVKVGDTVGRSDVIGLAGSTGRSTGTHLHYEVRQDGH
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCC
AVDPVYFMNAGLKLATYIK
CCCCCHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]