| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is sugE [H]
Identifier: 209549472
GI number: 209549472
Start: 1924530
End: 1924844
Strand: Direct
Name: sugE [H]
Synonym: Rleg2_1878
Alternate gene names: 209549472
Gene position: 1924530-1924844 (Clockwise)
Preceding gene: 209549471
Following gene: 209549480
Centisome position: 42.41
GC content: 62.22
Gene sequence:
>315_bases ATGGCCTGGTTTCTGCTTTTTCTCGCCGGTCTTTTCGAATGTGGCTGGGCGATCGGCCTTAAATACACCGATGGTTTCAC GCGGCCGCTGCCGACCGCGTTGACTGTCATATCCATGGTGGTCAGCGTCGTCCTGCTCGGCCTGGCGGTGAAGCACCTGC CGATCGGCACCGCCTATGCGGTGTGGACCGGTATCGGCACAGTCGGCACCGTGCTCCTCGGCATCTGGCTGCTTGGCGAT CAGGCAAGTGTCTCCCGCCTTGCCTGCATCATGCTGATCGTCGGCGGCATCGCCGGCCTCAAACTCACGGCCTGA
Upstream 100 bases:
>100_bases GCCGTCTCCTCACGCATATAGACGTCATCGCAGACGACTGCGGCATCTTACCGATGCAACCGTCGCGGGGACGGCCTCGC TCTTGAACAAGGAGAGTCGT
Downstream 100 bases:
>100_bases CGAAGAAAATGCTGCGGGGCATCGCAAATGCCCCGCAGTCTGTGTCGGCTCAGGCTGCCTTGCGGTTATCGACGGAAAAT GCGCCGGGACCGGAGAAGAA
Product: small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAWFLLFLAGLFECGWAIGLKYTDGFTRPLPTALTVISMVVSVVLLGLAVKHLPIGTAYAVWTGIGTVGTVLLGIWLLGD QASVSRLACIMLIVGGIAGLKLTA
Sequences:
>Translated_104_residues MAWFLLFLAGLFECGWAIGLKYTDGFTRPLPTALTVISMVVSVVLLGLAVKHLPIGTAYAVWTGIGTVGTVLLGIWLLGD QASVSRLACIMLIVGGIAGLKLTA >Mature_103_residues AWFLLFLAGLFECGWAIGLKYTDGFTRPLPTALTVISMVVSVVLLGLAVKHLPIGTAYAVWTGIGTVGTVLLGIWLLGDQ ASVSRLACIMLIVGGIAGLKLTA
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=103, Percent_Identity=58.252427184466, Blast_Score=114, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 10875; Mature: 10744
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWFLLFLAGLFECGWAIGLKYTDGFTRPLPTALTVISMVVSVVLLGLAVKHLPIGTAYA CHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGTVGTVLLGIWLLGDQASVSRLACIMLIVGGIAGLKLTA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure AWFLLFLAGLFECGWAIGLKYTDGFTRPLPTALTVISMVVSVVLLGLAVKHLPIGTAYA HHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VWTGIGTVGTVLLGIWLLGDQASVSRLACIMLIVGGIAGLKLTA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]