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The map label for this gene is ydiK [C]

Identifier: 209549432

GI number: 209549432

Start: 1888011

End: 1889207

Strand: Direct

Name: ydiK [C]

Synonym: Rleg2_1838

Alternate gene names: 209549432

Gene position: 1888011-1889207 (Clockwise)

Preceding gene: 209549431

Following gene: 209549434

Centisome position: 41.6

GC content: 63.83

Gene sequence:

>1197_bases
GTGGGTGTGTTCGACCGTCAGAAAAGCAATCATGAACCACGATGGCTCGGATCATCGGCGCCGACACGGACGCCGCTGAT
ACCCTCCATCTCGGCGGCGCGCTGGCTGCTGGTTCTGGTCGTTGCGGCGGGCGTTTACTTCTTCTACGGTTTCCTCGTGC
CGGTGCTGGCAGCCCTGGTCATCGGCTTCGCCAGCTGGCCGCTCTACCGCAAGCTGCTTGCCCGCGTCGGCGGCAATACG
ACGATCGCCGCGACGATCGCCATCATCATGATCATCACTTTCCTGGTCATCCCGATCGGGCTTGCGATCACCTATACGAC
GGGTGAAGTGCGCACCTGGGTTGCCTGGGCAATCCATGCCAACCGCGCCGGCGCCCCGACACCGGCCTGGATCGTCGCCC
TGCCATGGGCCGGCGCCTATCTCGATGAAGTCTGGACCAAATATATCGGCAGCCCCGGCGCCCTGGGCGAAGTGATACAG
GCGGTCAGCGGCGCCAATATCGGCAATATCTACCGTGCCGTGCTTGCGGCCGGCGGTGGCGCCTTCCACCTCCTGCTGAC
GCTGCTCTTCATGCTGATCGCGCTGTTCTTCGTCTATCGCGACGGTTTTTCCTTCTCCAAGCAGATCGACATGCTCGGCG
AGCGCATCCTGCCAAACCGCTGGGAGCGCATTTCCCGCGTCGTGCCGGCAACGATCAGCTCCACCGTCATGGGCATGACG
CTGATTGCGATCGGCGAAGGCATCGTGCTCGGCCTGGCTTACTGGATCGCCGGCGTGCCCTCGCCCGTCACGCTCGGCGT
GTTGACGGGCGTGATGGCGCTGATACCGGGCGGCGCACCGCTTTCCTTCACGCTGGTCTCAATCTATCTCTTGGCAAGCG
GCTCGCATGTCGCCGGCATCGGTCTTTTCGTCTGGGGAACGGTCGAGCTCTTCATAGTCGACAAGACGTTGCGGCCGAAG
CTCGTCGGCGGTCCGATCAAGCTGCCCTTCCTGCCGACCTTCTTCGGTCTCGTCGGCGGCGTCAAGACGATGGGCTTCCT
CGGCCTCTTCATTGGCCCGGTGCTGATGGCGCTGATCGTCGCCATCTGGCGCGAATGGATCCACGAGGCCCGCAACGCCG
AAAAGGGCGAGACGGGACCGCAGGTCCTCATCGACGAGCAAGCCCCGCCGGCAATCCCCCGTATCGCCGAAGGCTGA

Upstream 100 bases:

>100_bases
GGTCGAATAGCGACGCTTTGTATACGCTTTCATGGTGCGGACCTTGAAACCGCCGGGTTCATAGCCCATAACCAGAAGAC
AAGAATAAGAAGAGGCGCGC

Downstream 100 bases:

>100_bases
AAGAACCTTTCCGCCGAAGGCTGAACCGACCTGATTGCCGAAGGCTGAGCCGGCCTTCGCAGACCGTCATCCCAGCCGCT
TTTCCATGAACAGGCTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MGVFDRQKSNHEPRWLGSSAPTRTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNT
TIAATIAIIMIITFLVIPIGLAITYTTGEVRTWVAWAIHANRAGAPTPAWIVALPWAGAYLDEVWTKYIGSPGALGEVIQ
AVSGANIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMT
LIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPK
LVGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAEKGETGPQVLIDEQAPPAIPRIAEG

Sequences:

>Translated_398_residues
MGVFDRQKSNHEPRWLGSSAPTRTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNT
TIAATIAIIMIITFLVIPIGLAITYTTGEVRTWVAWAIHANRAGAPTPAWIVALPWAGAYLDEVWTKYIGSPGALGEVIQ
AVSGANIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMT
LIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPK
LVGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAEKGETGPQVLIDEQAPPAIPRIAEG
>Mature_397_residues
GVFDRQKSNHEPRWLGSSAPTRTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALVIGFASWPLYRKLLARVGGNTT
IAATIAIIMIITFLVIPIGLAITYTTGEVRTWVAWAIHANRAGAPTPAWIVALPWAGAYLDEVWTKYIGSPGALGEVIQA
VSGANIGNIYRAVLAAGGGAFHLLLTLLFMLIALFFVYRDGFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMTL
IAIGEGIVLGLAYWIAGVPSPVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGIGLFVWGTVELFIVDKTLRPKL
VGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIVAIWREWIHEARNAEKGETGPQVLIDEQAPPAIPRIAEG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=335, Percent_Identity=24.4776119402985, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42581; Mature: 42450

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFDRQKSNHEPRWLGSSAPTRTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGFASWPLYRKLLARVGGNTTIAATIAIIMIITFLVIPIGLAITYTTGEVRTWVAWAIHA
HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHEEEEC
NRAGAPTPAWIVALPWAGAYLDEVWTKYIGSPGALGEVIQAVSGANIGNIYRAVLAAGGG
CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCH
AFHLLLTLLFMLIALFFVYRDGFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGI
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH
GLFVWGTVELFIVDKTLRPKLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIV
HHHHHEEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIWREWIHEARNAEKGETGPQVLIDEQAPPAIPRIAEG
HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
GVFDRQKSNHEPRWLGSSAPTRTPLIPSISAARWLLVLVVAAGVYFFYGFLVPVLAALV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGFASWPLYRKLLARVGGNTTIAATIAIIMIITFLVIPIGLAITYTTGEVRTWVAWAIHA
HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHEEEEC
NRAGAPTPAWIVALPWAGAYLDEVWTKYIGSPGALGEVIQAVSGANIGNIYRAVLAAGGG
CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCH
AFHLLLTLLFMLIALFFVYRDGFSFSKQIDMLGERILPNRWERISRVVPATISSTVMGMT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LIAIGEGIVLGLAYWIAGVPSPVTLGVLTGVMALIPGGAPLSFTLVSIYLLASGSHVAGI
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH
GLFVWGTVELFIVDKTLRPKLVGGPIKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALIV
HHHHHEEEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIWREWIHEARNAEKGETGPQVLIDEQAPPAIPRIAEG
HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]