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The map label for this gene is ugpB [H]

Identifier: 209549368

GI number: 209549368

Start: 1813811

End: 1815076

Strand: Direct

Name: ugpB [H]

Synonym: Rleg2_1773

Alternate gene names: 209549368

Gene position: 1813811-1815076 (Clockwise)

Preceding gene: 209549367

Following gene: 209549370

Centisome position: 39.97

GC content: 62.24

Gene sequence:

>1266_bases
ATGAAACATATCACCCAGCTTCTCGCCGCAGCGGCCGTATCCTTGGCAATCGCGCTTCCCGCGCATGCCGAGACGACGCT
GACGGTTCATTACCCGATGCCGGGTTTCTTCAAGGACGTGATGGACACGATCTCGAAGAAGTTCATGGCAGAAAACCCCG
ACATCAAGATCCAGTTCGCCAGCCCCTCGGCAACCTATGAAGAAGGCATCCAGACGATCCTTCGCCAGGTCGGCACCAGC
GAAATGCCCGACATCACCTTCATCGGCCTCAACCGCCTGCGCATGCTCGACGAGCGCGACGTCGCCGTCGATCTCGGCCC
GCTCGTCAAGAAAGACGGCAACATGGCCGAGCAGGGCTTCTCCGACACGATCTTGAAGCTCGCCCAGGTCAAGGGCAAGC
AGGTGGGCCTCGCTTTCGCCACCTCCAACCCGATCATGTATTACAATGCCGATCTCGTGAAGGCGGCCGGCGGCGATCCT
GAAAATCCGCCGAAGACCTGGGATGAGGTCATTGCGCTCGGCGGCAAGATCAAGGCGCTCGGCAACGGCGTCGACGGCAT
CGATTTCCGCTGGCAGGGCGATGACTGGATGTTTTCCGCACTGCTCTTCGGCGCCGGTGGCAGGATGCTGAGCGATGATG
AGAGCAAGGTCGCCTTCAATGGTCCAGAAGGCAAGAAGGCCGTCGAGGTCCTGCATCGTTTGGTCACCGAGGGCGGCATG
CCGGTCTTCACCAAGCCCGCCGGCGAACAGGCTTTCGCAGCCGGCAAGGTCGGTTTCGAATTCCAGACGACGGGCGCGCT
GCGCAACACGATCAAGAATGTCGGCGACAAGTTCGATCTGCGCACCGCCAAGATCCCGTTGATCGATCCGGTCAACGGCC
GTCTTCCCACCGGCGGCAACGCCGTCGTCATCCTGACGCATGACGCCGCCAAGCAGGATGCTGCCTGGAAGTTCGCCAAA
TTCGCAGCCGGCCCTTACGGCGCCTCCGTCGTCGTGCCCGGCACCGGTTACGTCCCGAACAACGAGCTTGCCGCCAAGTC
GCCCGAATATCTCGGCGATTTCTACAAGCAGAACCCGCTGTTCCAGGCCGGCCTCAGCCAGATGCCGGTGATGATCCCCT
GGTATGCCTTCCCCGGCTCGAACGGCGTCAAGGTCACCCAGACGATCGTCGACAACCTCTCGCGCATCGTCGACCAGTCG
GCCGAGCCGAAGGAAGCGCTCGACGACGCGGCCGCCGATGTCGAGGGCATGCTGCCGCGCAGCTGA

Upstream 100 bases:

>100_bases
CCCCTCGTCGCGGCTTTCCTGTTTGCGCAGAAGCGTTTCGTCGAGGGCATCACCATGACCGGTCTCAAAGGCTGACCGGC
TTCAACCAGGAGAACGAGCG

Downstream 100 bases:

>100_bases
TTATCCTGCCCGTCAGAAAAGAGGATCGGGCCGTCACGCCAAGCGCGTGGCGGCCCTTTTGTTTCGAAGCTTCAGATGGC
GCGCACCGTGCCGCCGCGGC

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKHITQLLAAAAVSLAIALPAHAETTLTVHYPMPGFFKDVMDTISKKFMAENPDIKIQFASPSATYEEGIQTILRQVGTS
EMPDITFIGLNRLRMLDERDVAVDLGPLVKKDGNMAEQGFSDTILKLAQVKGKQVGLAFATSNPIMYYNADLVKAAGGDP
ENPPKTWDEVIALGGKIKALGNGVDGIDFRWQGDDWMFSALLFGAGGRMLSDDESKVAFNGPEGKKAVEVLHRLVTEGGM
PVFTKPAGEQAFAAGKVGFEFQTTGALRNTIKNVGDKFDLRTAKIPLIDPVNGRLPTGGNAVVILTHDAAKQDAAWKFAK
FAAGPYGASVVVPGTGYVPNNELAAKSPEYLGDFYKQNPLFQAGLSQMPVMIPWYAFPGSNGVKVTQTIVDNLSRIVDQS
AEPKEALDDAAADVEGMLPRS

Sequences:

>Translated_421_residues
MKHITQLLAAAAVSLAIALPAHAETTLTVHYPMPGFFKDVMDTISKKFMAENPDIKIQFASPSATYEEGIQTILRQVGTS
EMPDITFIGLNRLRMLDERDVAVDLGPLVKKDGNMAEQGFSDTILKLAQVKGKQVGLAFATSNPIMYYNADLVKAAGGDP
ENPPKTWDEVIALGGKIKALGNGVDGIDFRWQGDDWMFSALLFGAGGRMLSDDESKVAFNGPEGKKAVEVLHRLVTEGGM
PVFTKPAGEQAFAAGKVGFEFQTTGALRNTIKNVGDKFDLRTAKIPLIDPVNGRLPTGGNAVVILTHDAAKQDAAWKFAK
FAAGPYGASVVVPGTGYVPNNELAAKSPEYLGDFYKQNPLFQAGLSQMPVMIPWYAFPGSNGVKVTQTIVDNLSRIVDQS
AEPKEALDDAAADVEGMLPRS
>Mature_421_residues
MKHITQLLAAAAVSLAIALPAHAETTLTVHYPMPGFFKDVMDTISKKFMAENPDIKIQFASPSATYEEGIQTILRQVGTS
EMPDITFIGLNRLRMLDERDVAVDLGPLVKKDGNMAEQGFSDTILKLAQVKGKQVGLAFATSNPIMYYNADLVKAAGGDP
ENPPKTWDEVIALGGKIKALGNGVDGIDFRWQGDDWMFSALLFGAGGRMLSDDESKVAFNGPEGKKAVEVLHRLVTEGGM
PVFTKPAGEQAFAAGKVGFEFQTTGALRNTIKNVGDKFDLRTAKIPLIDPVNGRLPTGGNAVVILTHDAAKQDAAWKFAK
FAAGPYGASVVVPGTGYVPNNELAAKSPEYLGDFYKQNPLFQAGLSQMPVMIPWYAFPGSNGVKVTQTIVDNLSRIVDQS
AEPKEALDDAAADVEGMLPRS

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=421, Percent_Identity=26.1282660332542, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45178; Mature: 45178

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHITQLLAAAAVSLAIALPAHAETTLTVHYPMPGFFKDVMDTISKKFMAENPDIKIQFA
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
SPSATYEEGIQTILRQVGTSEMPDITFIGLNRLRMLDERDVAVDLGPLVKKDGNMAEQGF
CCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCCCCEEECCHHHCCCCCHHHCCH
SDTILKLAQVKGKQVGLAFATSNPIMYYNADLVKAAGGDPENPPKTWDEVIALGGKIKAL
HHHHHHHHHHCCCEEEEEEEECCCEEEECCCEEEECCCCCCCCCHHHHHHHHCCCEEEEC
GNGVDGIDFRWQGDDWMFSALLFGAGGRMLSDDESKVAFNGPEGKKAVEVLHRLVTEGGM
CCCCCCCCEEECCCHHHHHHHHHCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHCCCC
PVFTKPAGEQAFAAGKVGFEFQTTGALRNTIKNVGDKFDLRTAKIPLIDPVNGRLPTGGN
EEEECCCCCCHHHCCCCCEEEECHHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCCCCC
AVVILTHDAAKQDAAWKFAKFAAGPYGASVVVPGTGYVPNNELAAKSPEYLGDFYKQNPL
EEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCH
FQAGLSQMPVMIPWYAFPGSNGVKVTQTIVDNLSRIVDQSAEPKEALDDAAADVEGMLPR
HHHHHHCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
S
C
>Mature Secondary Structure
MKHITQLLAAAAVSLAIALPAHAETTLTVHYPMPGFFKDVMDTISKKFMAENPDIKIQFA
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEC
SPSATYEEGIQTILRQVGTSEMPDITFIGLNRLRMLDERDVAVDLGPLVKKDGNMAEQGF
CCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCCCCEEECCHHHCCCCCHHHCCH
SDTILKLAQVKGKQVGLAFATSNPIMYYNADLVKAAGGDPENPPKTWDEVIALGGKIKAL
HHHHHHHHHHCCCEEEEEEEECCCEEEECCCEEEECCCCCCCCCHHHHHHHHCCCEEEEC
GNGVDGIDFRWQGDDWMFSALLFGAGGRMLSDDESKVAFNGPEGKKAVEVLHRLVTEGGM
CCCCCCCCEEECCCHHHHHHHHHCCCCCEECCCCCEEEECCCCCHHHHHHHHHHHHCCCC
PVFTKPAGEQAFAAGKVGFEFQTTGALRNTIKNVGDKFDLRTAKIPLIDPVNGRLPTGGN
EEEECCCCCCHHHCCCCCEEEECHHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCCCCC
AVVILTHDAAKQDAAWKFAKFAAGPYGASVVVPGTGYVPNNELAAKSPEYLGDFYKQNPL
EEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCH
FQAGLSQMPVMIPWYAFPGSNGVKVTQTIVDNLSRIVDQSAEPKEALDDAAADVEGMLPR
HHHHHHCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]