| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is zraS [C]
Identifier: 209549360
GI number: 209549360
Start: 1805813
End: 1807918
Strand: Direct
Name: zraS [C]
Synonym: Rleg2_1764
Alternate gene names: 209549360
Gene position: 1805813-1807918 (Clockwise)
Preceding gene: 209549359
Following gene: 209549363
Centisome position: 39.79
GC content: 61.4
Gene sequence:
>2106_bases GTGATCAGCCGCTCCTTTCTGTCGTCGATTGCCTTTCGCTTGCCTTTCGCGATTGCCTTCATCTGCTTCCTGGTTTTCAG TCTTTCAGCGATCGCGATCTACGGGCTGCAGCGCGCCCGTGACGAAATGGCTGCCTATGGCCTACAGGCCTTCACGAGCC TGGCCAAAGCCTCGCTTGTTTCCCGGCAAGTATCCGATCTGGTGTCGAGCGCGCCCTTCCTGATGAACTCGACCTCGCCC TACCGGGTGGCGAGCGAGAGCCGCGCTGTCGTGCTGCAGGTCGACAGCCTGCTGAAGACGGCCGAGCCGCACGGAGCAGA CCAGTCTGCGCGCGGCTTTGCCAGCGCGAGGATGGTTGAGCTTCTCGACCTTATCAGGACACAGACGCTTGTGCTTGCCA GGGACGCCGACGCCGCCCAGAACCACAAGGCTGAAGCCGCGGCGGCGCTAGGGGAGGTGGCGACCGGCAAGGGCATTGTC GATCCCGATCTGCGCCGTCAAGTGAACGGAATCGTGCAAGCGGCTTCCACCTCCGACAGTCTTTTCCAGCTTGGCGAACT TCGCAGGCGATACGTGGCGGGTACCACCAAGGCGCAAGGGGGGACCGAGCCGGAGTCGAGGATTTCGCCTGCCGAGTTGC AGCCGTATGAGCGCGTGTTCGAAGCTCAAACACGATACCTTTTGAATATGTTCGCGATCCGGGCGGCGGTCGCAAAGCTG CATGCCGTCTCCCGCGACCTCTCTCATGCAACGGAGACGCAAAGCGATGCAGTTGCACGCCAGCTGAATGACGATCTGCT TTCGACCTCCGATGCCTTGAGCCGGCTCCTGGTCACCGTGGCCTTGGCTTTTCTGCTCGTGCTCGTCATGGCCATATTCT CCATCCGGTCGGTCATGCGCGTGTCACGGGGCATCGTGGCGCTGTCGAACGGCATGAATGCGCTCGCCAAGGGTGAAAAC GAAGTGGGGCCGCCAGCCTACGGCGGAAATGAAACCGAGCTTGTGCGTCTGCTGGATGCGTTCCGCGCCTTCAAGGACAG CGTGGATCGCGTGTCTCGATTAAGACGCACGGCAGAAGCCGCCGCCCGCACCATCCGGTCGACCTTTCGCAACATGAACG AGGGGATCGCGCTTTTCGACAAGATGGGGCGACCGATCACCATGAACAGGCGGATCATCGAACTGTTTGGCCACTCGGGT TCCGCGCGCAAATTGCCGCTGCGCCGGTTTGTCGAGCCCGTGCCGGAGATTGATCCCGCCTTGCTGCCCTCAGATCCGGA CCGCGGCGCCCTGTTGGAGCGTGCCGTCATCCGCCATCGGACCGGTGACCAGCGGGTAGTTGAGATTTCCATGTCACGAC AGCCGGAGGGCGGCATCGTTCTTCTTGCGCGCGACGTAACGCTGATGGATCGACAGGAGGCGGAAGCGGCAAAGGTTCAG CGGCTGGACGGTATCATGCGCATGACGCATCAGGTGAGCCACGAAGTGGGCAACATGATCGGCATCATCACCGGCAGCCT CGGCCTTCTGGAGCGTGAAACCGGCTTCAACGATCGGCAAAAACGCAACATTGCCCGGATCCGCAAGGCGGCCGAGAGGG GACGATCGCTAGCCGGCAGCATGTTATCGATCGGCAGCCAGCAGCCGTTCTATCCAAGCCCGGTGGATGTCGGCAGTCTC CTCCGCGGGATGGCCGATATCCTGGAGATCGCTGTCGGTGCAAAGTGCCATATAAAGCTGGAGCTGGATGCTGACCTGCC GGTCGTATCGCTCGACGCGGCTCTCTTGGAACAGTCCGTTCTGAACCTCTGTCTCAACGCTTCGGCAGCGATGCCGCTGG GAGGCATCATCGTTATCGGCGCGACGGCAACGACGGAAATCTTGCTGATTTCGGTGACCGACAGCGGCATAGGCATGAGC CCAGAGGTGATAGACAAAGCTTTCGAGCCCTATTTCACCACGCGAGGTTCCCACGGTGGAGCAGGGCTCGGCCTTGCCAT GGTGTACGGCTTTGTCCGTCAGAGCGGCGGGGAGGCGTCCATCTATTCCTCTCCCGGAAACGGAACGACCGTCAGGCTTA GCTTCCCGACCGGTTTGCGCTCTTAA
Upstream 100 bases:
>100_bases TCCGGCGGAAAATCGAACGCAATCCCGACCTTCCGCGCCATATCAAGACACGACGCGGAAAGGGCTATGTCCTGCACACT GGCGACGGCGAGCCGTCAGC
Downstream 100 bases:
>100_bases TCAGCGGTCAGGAGGTGCCACCAGATTAACGCTCATTGCGCTCGAAAAACCACGCGAGCAGGATGCCGGTGAAGAGCATG CCGGCCGCGACGAAGATCGT
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MISRSFLSSIAFRLPFAIAFICFLVFSLSAIAIYGLQRARDEMAAYGLQAFTSLAKASLVSRQVSDLVSSAPFLMNSTSP YRVASESRAVVLQVDSLLKTAEPHGADQSARGFASARMVELLDLIRTQTLVLARDADAAQNHKAEAAAALGEVATGKGIV DPDLRRQVNGIVQAASTSDSLFQLGELRRRYVAGTTKAQGGTEPESRISPAELQPYERVFEAQTRYLLNMFAIRAAVAKL HAVSRDLSHATETQSDAVARQLNDDLLSTSDALSRLLVTVALAFLLVLVMAIFSIRSVMRVSRGIVALSNGMNALAKGEN EVGPPAYGGNETELVRLLDAFRAFKDSVDRVSRLRRTAEAAARTIRSTFRNMNEGIALFDKMGRPITMNRRIIELFGHSG SARKLPLRRFVEPVPEIDPALLPSDPDRGALLERAVIRHRTGDQRVVEISMSRQPEGGIVLLARDVTLMDRQEAEAAKVQ RLDGIMRMTHQVSHEVGNMIGIITGSLGLLERETGFNDRQKRNIARIRKAAERGRSLAGSMLSIGSQQPFYPSPVDVGSL LRGMADILEIAVGAKCHIKLELDADLPVVSLDAALLEQSVLNLCLNASAAMPLGGIIVIGATATTEILLISVTDSGIGMS PEVIDKAFEPYFTTRGSHGGAGLGLAMVYGFVRQSGGEASIYSSPGNGTTVRLSFPTGLRS
Sequences:
>Translated_701_residues MISRSFLSSIAFRLPFAIAFICFLVFSLSAIAIYGLQRARDEMAAYGLQAFTSLAKASLVSRQVSDLVSSAPFLMNSTSP YRVASESRAVVLQVDSLLKTAEPHGADQSARGFASARMVELLDLIRTQTLVLARDADAAQNHKAEAAAALGEVATGKGIV DPDLRRQVNGIVQAASTSDSLFQLGELRRRYVAGTTKAQGGTEPESRISPAELQPYERVFEAQTRYLLNMFAIRAAVAKL HAVSRDLSHATETQSDAVARQLNDDLLSTSDALSRLLVTVALAFLLVLVMAIFSIRSVMRVSRGIVALSNGMNALAKGEN EVGPPAYGGNETELVRLLDAFRAFKDSVDRVSRLRRTAEAAARTIRSTFRNMNEGIALFDKMGRPITMNRRIIELFGHSG SARKLPLRRFVEPVPEIDPALLPSDPDRGALLERAVIRHRTGDQRVVEISMSRQPEGGIVLLARDVTLMDRQEAEAAKVQ RLDGIMRMTHQVSHEVGNMIGIITGSLGLLERETGFNDRQKRNIARIRKAAERGRSLAGSMLSIGSQQPFYPSPVDVGSL LRGMADILEIAVGAKCHIKLELDADLPVVSLDAALLEQSVLNLCLNASAAMPLGGIIVIGATATTEILLISVTDSGIGMS PEVIDKAFEPYFTTRGSHGGAGLGLAMVYGFVRQSGGEASIYSSPGNGTTVRLSFPTGLRS >Mature_701_residues MISRSFLSSIAFRLPFAIAFICFLVFSLSAIAIYGLQRARDEMAAYGLQAFTSLAKASLVSRQVSDLVSSAPFLMNSTSP YRVASESRAVVLQVDSLLKTAEPHGADQSARGFASARMVELLDLIRTQTLVLARDADAAQNHKAEAAAALGEVATGKGIV DPDLRRQVNGIVQAASTSDSLFQLGELRRRYVAGTTKAQGGTEPESRISPAELQPYERVFEAQTRYLLNMFAIRAAVAKL HAVSRDLSHATETQSDAVARQLNDDLLSTSDALSRLLVTVALAFLLVLVMAIFSIRSVMRVSRGIVALSNGMNALAKGEN EVGPPAYGGNETELVRLLDAFRAFKDSVDRVSRLRRTAEAAARTIRSTFRNMNEGIALFDKMGRPITMNRRIIELFGHSG SARKLPLRRFVEPVPEIDPALLPSDPDRGALLERAVIRHRTGDQRVVEISMSRQPEGGIVLLARDVTLMDRQEAEAAKVQ RLDGIMRMTHQVSHEVGNMIGIITGSLGLLERETGFNDRQKRNIARIRKAAERGRSLAGSMLSIGSQQPFYPSPVDVGSL LRGMADILEIAVGAKCHIKLELDADLPVVSLDAALLEQSVLNLCLNASAAMPLGGIIVIGATATTEILLISVTDSGIGMS PEVIDKAFEPYFTTRGSHGGAGLGLAMVYGFVRQSGGEASIYSSPGNGTTVRLSFPTGLRS
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=29.0748898678414, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788549, Length=264, Percent_Identity=26.1363636363636, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI48994928, Length=150, Percent_Identity=30, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1790300, Length=262, Percent_Identity=24.4274809160305, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87081816, Length=217, Percent_Identity=26.2672811059908, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75559; Mature: 75559
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRSFLSSIAFRLPFAIAFICFLVFSLSAIAIYGLQRARDEMAAYGLQAFTSLAKASLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQVSDLVSSAPFLMNSTSPYRVASESRAVVLQVDSLLKTAEPHGADQSARGFASARMVE HHHHHHHHHCCCHHCCCCCCCEECCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHH LLDLIRTQTLVLARDADAAQNHKAEAAAALGEVATGKGIVDPDLRRQVNGIVQAASTSDS HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHH LFQLGELRRRYVAGTTKAQGGTEPESRISPAELQPYERVFEAQTRYLLNMFAIRAAVAKL HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HAVSRDLSHATETQSDAVARQLNDDLLSTSDALSRLLVTVALAFLLVLVMAIFSIRSVMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRGIVALSNGMNALAKGENEVGPPAYGGNETELVRLLDAFRAFKDSVDRVSRLRRTAEA HHHCHHEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTIRSTFRNMNEGIALFDKMGRPITMNRRIIELFGHSGSARKLPLRRFVEPVPEIDPA HHHHHHHHHHHHHCHHHHHHHCCCCEECCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC LLPSDPDRGALLERAVIRHRTGDQRVVEISMSRQPEGGIVLLARDVTLMDRQEAEAAKVQ CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHH RLDGIMRMTHQVSHEVGNMIGIITGSLGLLERETGFNDRQKRNIARIRKAAERGRSLAGS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MLSIGSQQPFYPSPVDVGSLLRGMADILEIAVGAKCHIKLELDADLPVVSLDAALLEQSV HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHH LNLCLNASAAMPLGGIIVIGATATTEILLISVTDSGIGMSPEVIDKAFEPYFTTRGSHGG HHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCCCC AGLGLAMVYGFVRQSGGEASIYSSPGNGTTVRLSFPTGLRS CHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure MISRSFLSSIAFRLPFAIAFICFLVFSLSAIAIYGLQRARDEMAAYGLQAFTSLAKASLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQVSDLVSSAPFLMNSTSPYRVASESRAVVLQVDSLLKTAEPHGADQSARGFASARMVE HHHHHHHHHCCCHHCCCCCCCEECCCCCEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHH LLDLIRTQTLVLARDADAAQNHKAEAAAALGEVATGKGIVDPDLRRQVNGIVQAASTSDS HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHH LFQLGELRRRYVAGTTKAQGGTEPESRISPAELQPYERVFEAQTRYLLNMFAIRAAVAKL HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HAVSRDLSHATETQSDAVARQLNDDLLSTSDALSRLLVTVALAFLLVLVMAIFSIRSVMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSRGIVALSNGMNALAKGENEVGPPAYGGNETELVRLLDAFRAFKDSVDRVSRLRRTAEA HHHCHHEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTIRSTFRNMNEGIALFDKMGRPITMNRRIIELFGHSGSARKLPLRRFVEPVPEIDPA HHHHHHHHHHHHHCHHHHHHHCCCCEECCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC LLPSDPDRGALLERAVIRHRTGDQRVVEISMSRQPEGGIVLLARDVTLMDRQEAEAAKVQ CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHH RLDGIMRMTHQVSHEVGNMIGIITGSLGLLERETGFNDRQKRNIARIRKAAERGRSLAGS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MLSIGSQQPFYPSPVDVGSLLRGMADILEIAVGAKCHIKLELDADLPVVSLDAALLEQSV HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHH LNLCLNASAAMPLGGIIVIGATATTEILLISVTDSGIGMSPEVIDKAFEPYFTTRGSHGG HHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCCCC AGLGLAMVYGFVRQSGGEASIYSSPGNGTTVRLSFPTGLRS CHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA