Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 209549313

GI number: 209549313

Start: 1752598

End: 1753683

Strand: Direct

Name: yufP [H]

Synonym: Rleg2_1717

Alternate gene names: 209549313

Gene position: 1752598-1753683 (Clockwise)

Preceding gene: 209549312

Following gene: 209549314

Centisome position: 38.62

GC content: 61.42

Gene sequence:

>1086_bases
ATGCGCATTGAACTCGAAAAACGCCCCGACGTCTCGAAGCTCTATACCTTCGTCTCGCCGCTGCTGGCCCTTGTGCTGAC
ACTGGTCTTCGGCGCCATCATGTTCGCCATGCTCGGCAAGGATCCTGTGGAGGCGCTGGACGCCTTCTTTGTCGAGCCGC
TGCTCGAGGTCTGGTCGCTGCACGAACTGGCGATCAAGGCGGCACCGTTGATCCTGATCGCCGTCGGCCTGGCTGTCTGC
TATCGCTCGAACAACTGGAATATCGGCGCCGAAGGCCAGTTCACCATCGGCGCCATCACCGGCTCCTATCTACCGATCGT
CTTTTACGACTGGCATTCGCCGCTTGTCCTGCCGCTGATGCTCATTCTGGGAGCGCTCGGCGGTGCGCTTTTCGCCGCCA
TTCCGGCGCTGTTGAAGGCGCATTTCAACACCAACGAAATCCTGACGTCGCTGATGCTGGTCTATATCGCCCAGCTCTTC
CTCGACTGGCTGATCCGCGGCGCCTGGCGCGATCCGAAGGGCTTCAATTTTCCGGTCTCGCGCGATTTCGCCCCTGAGGC
GGTGCTGCCGGCGATCTGGGAAGAGTCGGGTCGGGCCCATTGGGCCTTCATCTTTGCCATTATCGCGGCGATCGGCGTCT
GGTTCATGCTGCGTTATACGCTGAAAGGCTTCGAGATCGTCGTGCTCGGCCAGTCGGAGCGGGCAGGGCGCTTTGCCGGT
TTCTCCTCGAAGAAGATGATCTGGTTCAGCTTCCTCTTCTCAGGCGCCCTTGCCGGCCTTGCCGGGATAGCCGAGGTCTC
CGGCTCGATCGGCCACCTGCAGCCGGCGATCTCGCCGGGCTACGGCTTCACCGCCATCATCGTCGCCTTTTTGGGACGCC
TCAATCCGCTCGGCATTATTGCATCGGGCCTGGTGCTGGCATTGACCTATCTCGGCGGCGAGTCGGCACAGCTGTCGCTC
GGCGTCTCCGATAAGGTCACCCGCGTCTTCCAGGGCCTGCTGCTCTTCTTCGTGCTCTCCTGCGATACGCTGATCTATTA
CAAAATCCGCATCGTCTGGTCGCGGCTGAGAGGTGGGGCGGCATGA

Upstream 100 bases:

>100_bases
CAGGCGAACTGACTCGCGAAAAGATCGGCCTGCTGATGGGCGGCCTGCATCAGAGCGGTGGTGCTCCAGAGGCGCCCCAT
GCGCATTGAAGAGGCAGCCC

Downstream 100 bases:

>100_bases
GCATCTTCGAAGCCATCCTGCTGACCGTCATCACCGCCTCGACGCCGCTCGTCATCGCCGCCCTCGGTGAACTCGTCACG
GAGCGTTCCGGCGTTCTCAA

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRIELEKRPDVSKLYTFVSPLLALVLTLVFGAIMFAMLGKDPVEALDAFFVEPLLEVWSLHELAIKAAPLILIAVGLAVC
YRSNNWNIGAEGQFTIGAITGSYLPIVFYDWHSPLVLPLMLILGALGGALFAAIPALLKAHFNTNEILTSLMLVYIAQLF
LDWLIRGAWRDPKGFNFPVSRDFAPEAVLPAIWEESGRAHWAFIFAIIAAIGVWFMLRYTLKGFEIVVLGQSERAGRFAG
FSSKKMIWFSFLFSGALAGLAGIAEVSGSIGHLQPAISPGYGFTAIIVAFLGRLNPLGIIASGLVLALTYLGGESAQLSL
GVSDKVTRVFQGLLLFFVLSCDTLIYYKIRIVWSRLRGGAA

Sequences:

>Translated_361_residues
MRIELEKRPDVSKLYTFVSPLLALVLTLVFGAIMFAMLGKDPVEALDAFFVEPLLEVWSLHELAIKAAPLILIAVGLAVC
YRSNNWNIGAEGQFTIGAITGSYLPIVFYDWHSPLVLPLMLILGALGGALFAAIPALLKAHFNTNEILTSLMLVYIAQLF
LDWLIRGAWRDPKGFNFPVSRDFAPEAVLPAIWEESGRAHWAFIFAIIAAIGVWFMLRYTLKGFEIVVLGQSERAGRFAG
FSSKKMIWFSFLFSGALAGLAGIAEVSGSIGHLQPAISPGYGFTAIIVAFLGRLNPLGIIASGLVLALTYLGGESAQLSL
GVSDKVTRVFQGLLLFFVLSCDTLIYYKIRIVWSRLRGGAA
>Mature_361_residues
MRIELEKRPDVSKLYTFVSPLLALVLTLVFGAIMFAMLGKDPVEALDAFFVEPLLEVWSLHELAIKAAPLILIAVGLAVC
YRSNNWNIGAEGQFTIGAITGSYLPIVFYDWHSPLVLPLMLILGALGGALFAAIPALLKAHFNTNEILTSLMLVYIAQLF
LDWLIRGAWRDPKGFNFPVSRDFAPEAVLPAIWEESGRAHWAFIFAIIAAIGVWFMLRYTLKGFEIVVLGQSERAGRFAG
FSSKKMIWFSFLFSGALAGLAGIAEVSGSIGHLQPAISPGYGFTAIIVAFLGRLNPLGIIASGLVLALTYLGGESAQLSL
GVSDKVTRVFQGLLLFFVLSCDTLIYYKIRIVWSRLRGGAA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39393; Mature: 39393

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIELEKRPDVSKLYTFVSPLLALVLTLVFGAIMFAMLGKDPVEALDAFFVEPLLEVWSL
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HELAIKAAPLILIAVGLAVCYRSNNWNIGAEGQFTIGAITGSYLPIVFYDWHSPLVLPLM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHH
LILGALGGALFAAIPALLKAHFNTNEILTSLMLVYIAQLFLDWLIRGAWRDPKGFNFPVS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RDFAPEAVLPAIWEESGRAHWAFIFAIIAAIGVWFMLRYTLKGFEIVVLGQSERAGRFAG
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCC
FSSKKMIWFSFLFSGALAGLAGIAEVSGSIGHLQPAISPGYGFTAIIVAFLGRLNPLGII
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
ASGLVLALTYLGGESAQLSLGVSDKVTRVFQGLLLFFVLSCDTLIYYKIRIVWSRLRGGA
HHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
A
C
>Mature Secondary Structure
MRIELEKRPDVSKLYTFVSPLLALVLTLVFGAIMFAMLGKDPVEALDAFFVEPLLEVWSL
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HELAIKAAPLILIAVGLAVCYRSNNWNIGAEGQFTIGAITGSYLPIVFYDWHSPLVLPLM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHH
LILGALGGALFAAIPALLKAHFNTNEILTSLMLVYIAQLFLDWLIRGAWRDPKGFNFPVS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RDFAPEAVLPAIWEESGRAHWAFIFAIIAAIGVWFMLRYTLKGFEIVVLGQSERAGRFAG
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCC
FSSKKMIWFSFLFSGALAGLAGIAEVSGSIGHLQPAISPGYGFTAIIVAFLGRLNPLGII
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
ASGLVLALTYLGGESAQLSLGVSDKVTRVFQGLLLFFVLSCDTLIYYKIRIVWSRLRGGA
HHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]