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The map label for this gene is nanR [C]

Identifier: 209549308

GI number: 209549308

Start: 1747423

End: 1748037

Strand: Direct

Name: nanR [C]

Synonym: Rleg2_1712

Alternate gene names: 209549308

Gene position: 1747423-1748037 (Clockwise)

Preceding gene: 209549307

Following gene: 209549310

Centisome position: 38.51

GC content: 65.85

Gene sequence:

>615_bases
ATGCAGACGTCACAGAGCCATCTTGCCTATCTCGCGCTGGAGCATCTGATCGTGACGCTGGTGCTGAAGCCGGGTGCGCT
GGTCACCGAAAAGCAGTTGATCGATATGGCGGGCCATGGGCGCACGCCGGTGCGCGAGGCGATCCAGAAGCTTGCCTGGC
AGGGGCTGGTCCTGGTGAAGCCGCGTGTCGGGCTGCAGGTGGCCGAGATTGCGCCCGGGGATCACGGCAATGTCATGCAG
GTGCGCCGCGAGCTGGAGCCGATTGCGGCAAGCCTCGCAGCCGAACATGCGACGGACGAACAGCGCGTCCGCCTTGGCGA
CTGCGCCCGCGCGATGGAGGACTGCGCCGTCACCGGCAATCTCGCCGGCTTCTTCGCCGCCGACAAGACCTTTGACGAAA
TCCTCGAGGATGCCTGTCCGAACGGCTTCATCATGGCGGCACTTGGCCCGGTGCAGACGCATGCGCGTCGCCTCTGGTAT
TCCACCGCAAATCCGGAGCGCATGGACCGCGCCATTGCGCTGCACGTCGCCGTCATCCGCGCCATTCGGCAGGGCAGGCC
GGAGGAGGCGCATGCTGCGATGGCGACCCTGATCGACTATCTCGCCCGCCCATAA

Upstream 100 bases:

>100_bases
TTATCTCTTTGTCTCCATTCTGATATTTCAATGCCGACTTGTCTTCGGTTTTTGACCGTGCCACTATGTGATATATCAGA
TTGATCAGCGGATTTCCGGC

Downstream 100 bases:

>100_bases
AAACGGCCCCGTTTCCGGAGCCGTCGTCAGATCAGGGTGTCGAAGGAAACGTCAGCCGACGAAGGCGCGTTCGATGACGA
ATTCGGCAGGCTTGCTGTTG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; HTH-Type Transcriptional Regulator; Transcriptional Regulator Gntr Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator Protein GntR Family; Transcriptional Regulator Protein; GntR Family Regulatory Protein; Transcriptional Regulator GntR Family Protein; Regulatory Protein GntR HTH; GntR Domain-Containing Protein; Mn-Dependent Transcriptional Regulator; Transcriptional Regulator GntR; Regulatory Protein; FCD Domain Protein; GntR Domain Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MQTSQSHLAYLALEHLIVTLVLKPGALVTEKQLIDMAGHGRTPVREAIQKLAWQGLVLVKPRVGLQVAEIAPGDHGNVMQ
VRRELEPIAASLAAEHATDEQRVRLGDCARAMEDCAVTGNLAGFFAADKTFDEILEDACPNGFIMAALGPVQTHARRLWY
STANPERMDRAIALHVAVIRAIRQGRPEEAHAAMATLIDYLARP

Sequences:

>Translated_204_residues
MQTSQSHLAYLALEHLIVTLVLKPGALVTEKQLIDMAGHGRTPVREAIQKLAWQGLVLVKPRVGLQVAEIAPGDHGNVMQ
VRRELEPIAASLAAEHATDEQRVRLGDCARAMEDCAVTGNLAGFFAADKTFDEILEDACPNGFIMAALGPVQTHARRLWY
STANPERMDRAIALHVAVIRAIRQGRPEEAHAAMATLIDYLARP
>Mature_204_residues
MQTSQSHLAYLALEHLIVTLVLKPGALVTEKQLIDMAGHGRTPVREAIQKLAWQGLVLVKPRVGLQVAEIAPGDHGNVMQ
VRRELEPIAASLAAEHATDEQRVRLGDCARAMEDCAVTGNLAGFFAADKTFDEILEDACPNGFIMAALGPVQTHARRLWY
STANPERMDRAIALHVAVIRAIRQGRPEEAHAAMATLIDYLARP

Specific function: Sialic acid (NANA) and N-acetylmannosamine utilization [C]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22269; Mature: 22269

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTSQSHLAYLALEHLIVTLVLKPGALVTEKQLIDMAGHGRTPVREAIQKLAWQGLVLVK
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEC
PRVGLQVAEIAPGDHGNVMQVRRELEPIAASLAAEHATDEQRVRLGDCARAMEDCAVTGN
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
LAGFFAADKTFDEILEDACPNGFIMAALGPVQTHARRLWYSTANPERMDRAIALHVAVIR
CHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AIRQGRPEEAHAAMATLIDYLARP
HHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTSQSHLAYLALEHLIVTLVLKPGALVTEKQLIDMAGHGRTPVREAIQKLAWQGLVLVK
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEC
PRVGLQVAEIAPGDHGNVMQVRRELEPIAASLAAEHATDEQRVRLGDCARAMEDCAVTGN
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
LAGFFAADKTFDEILEDACPNGFIMAALGPVQTHARRLWYSTANPERMDRAIALHVAVIR
CHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AIRQGRPEEAHAAMATLIDYLARP
HHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA