Click here to switch to the map view.

The map label for this gene is yurM [H]

Identifier: 209549284

GI number: 209549284

Start: 1717325

End: 1718173

Strand: Direct

Name: yurM [H]

Synonym: Rleg2_1687

Alternate gene names: 209549284

Gene position: 1717325-1718173 (Clockwise)

Preceding gene: 209549283

Following gene: 209549285

Centisome position: 37.84

GC content: 58.78

Gene sequence:

>849_bases
ATGACTGATATGAGCTCTTCCATCCGCATGAGTGCGTCGACACGCATCTATCTCTACGTGTCGCTGAGCCTGATTGCCGC
GATCGTGCTTATCCCGTTGCTGACGACGGCGCTCGGCGGCTTCAAGACGCTGGGCGACCTGCGCACCAATCCCTTCGGCA
TGCCGACGGAATGGCAATGGACGAATTATACCGACATTCTCTTCGGCGAGCGCTACTGGCTGCAGATCGGCAATTCGCTG
ATCATTGCCGCACTCACCGTGCTGCTGACGCTGATTGTCTCGTCGATGGCCGCCTTCGCCTTTGCCCATGTCCGCTTCTT
CGGCTCGTCCTTCCTGCTGAATTATTTCCTGCTCGGCCTGATGTTTCCGGCGGCGACCGCAATCCTGCCGCTCTTCATTC
GCATCCGCGATCTCGGCCTGTTGAACACCTATTGGGGCGTGGTGCTGCCGCAGGTGGCCTTCGGCCTCGGCATGAGCATC
CTGTTGTTTCGCAATTATTTCCGCAACCTCCCGGAAGAATTGTTCCAGGCGGCCTTCGTCGATGGCTGCGGTTATCTCAG
GTTCTTCTGGCATATCTCGCTGCCGCTTTCCCGGCCGATCGTCGCCACGGTAAGCATCATCTCCTTCGTCGGTAGCTGGA
ACAGCTACATCCTGCCGCTGATCATGCTGAACTCGGAATCGAAATATCCCTGGCCGCTCGGCATCATGGTCTATCGCGGC
GAATACGGCACCGAATGGCAGTTGGTGCTGGCCTTCATCACGCTGACCATCCTGCCCACCATCATCGTCTTTTTCGTCGC
CCAGCGGCACATCATCGCCGGCCTGACCGCCGGCGCCGTGAAGTCCTGA

Upstream 100 bases:

>100_bases
GTCATGCGCATGCAGGTCGGCCTCGGCAGCGCCGTCGGCGTGGTGCTGTTCATCATCTGCGTGACGCTCGCCTTCGGTTA
CAAAAGGATCTTCATGCGCC

Downstream 100 bases:

>100_bases
GCCGAACCATTTGGAGCTGCAAGCATGGCATCCGTTTCACTGCACGATGTAACTAAGGCCTATGGCGCCGTCGACGTCAT
CCATGGCATCTCGCTCGATA

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTDMSSSIRMSASTRIYLYVSLSLIAAIVLIPLLTTALGGFKTLGDLRTNPFGMPTEWQWTNYTDILFGERYWLQIGNSL
IIAALTVLLTLIVSSMAAFAFAHVRFFGSSFLLNYFLLGLMFPAATAILPLFIRIRDLGLLNTYWGVVLPQVAFGLGMSI
LLFRNYFRNLPEELFQAAFVDGCGYLRFFWHISLPLSRPIVATVSIISFVGSWNSYILPLIMLNSESKYPWPLGIMVYRG
EYGTEWQLVLAFITLTILPTIIVFFVAQRHIIAGLTAGAVKS

Sequences:

>Translated_282_residues
MTDMSSSIRMSASTRIYLYVSLSLIAAIVLIPLLTTALGGFKTLGDLRTNPFGMPTEWQWTNYTDILFGERYWLQIGNSL
IIAALTVLLTLIVSSMAAFAFAHVRFFGSSFLLNYFLLGLMFPAATAILPLFIRIRDLGLLNTYWGVVLPQVAFGLGMSI
LLFRNYFRNLPEELFQAAFVDGCGYLRFFWHISLPLSRPIVATVSIISFVGSWNSYILPLIMLNSESKYPWPLGIMVYRG
EYGTEWQLVLAFITLTILPTIIVFFVAQRHIIAGLTAGAVKS
>Mature_281_residues
TDMSSSIRMSASTRIYLYVSLSLIAAIVLIPLLTTALGGFKTLGDLRTNPFGMPTEWQWTNYTDILFGERYWLQIGNSLI
IAALTVLLTLIVSSMAAFAFAHVRFFGSSFLLNYFLLGLMFPAATAILPLFIRIRDLGLLNTYWGVVLPQVAFGLGMSIL
LFRNYFRNLPEELFQAAFVDGCGYLRFFWHISLPLSRPIVATVSIISFVGSWNSYILPLIMLNSESKYPWPLGIMVYRGE
YGTEWQLVLAFITLTILPTIIVFFVAQRHIIAGLTAGAVKS

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=206, Percent_Identity=33.495145631068, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1787571, Length=272, Percent_Identity=27.5735294117647, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=31.9047619047619, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31613; Mature: 31482

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMSSSIRMSASTRIYLYVSLSLIAAIVLIPLLTTALGGFKTLGDLRTNPFGMPTEWQW
CCCCCCHHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TNYTDILFGERYWLQIGNSLIIAALTVLLTLIVSSMAAFAFAHVRFFGSSFLLNYFLLGL
CCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFPAATAILPLFIRIRDLGLLNTYWGVVLPQVAFGLGMSILLFRNYFRNLPEELFQAAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGCGYLRFFWHISLPLSRPIVATVSIISFVGSWNSYILPLIMLNSESKYPWPLGIMVYRG
CCCHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEEC
EYGTEWQLVLAFITLTILPTIIVFFVAQRHIIAGLTAGAVKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDMSSSIRMSASTRIYLYVSLSLIAAIVLIPLLTTALGGFKTLGDLRTNPFGMPTEWQW
CCCCCHHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TNYTDILFGERYWLQIGNSLIIAALTVLLTLIVSSMAAFAFAHVRFFGSSFLLNYFLLGL
CCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFPAATAILPLFIRIRDLGLLNTYWGVVLPQVAFGLGMSILLFRNYFRNLPEELFQAAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGCGYLRFFWHISLPLSRPIVATVSIISFVGSWNSYILPLIMLNSESKYPWPLGIMVYRG
CCCHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEEC
EYGTEWQLVLAFITLTILPTIIVFFVAQRHIIAGLTAGAVKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]