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The map label for this gene is ubiF [C]

Identifier: 209549239

GI number: 209549239

Start: 1670394

End: 1671605

Strand: Direct

Name: ubiF [C]

Synonym: Rleg2_1640

Alternate gene names: 209549239

Gene position: 1670394-1671605 (Clockwise)

Preceding gene: 209549238

Following gene: 209549244

Centisome position: 36.81

GC content: 65.1

Gene sequence:

>1212_bases
ATGAAGACATTCGAAGTGGCGGTGATCGGTGGCGGTCTCGCCGGCATGATCGCCGCAATCGCGCTTGCCCGCGGCGGCCG
CAGCGTGGCGCTGGTTGCGCCCGTTGCCGCAAGGGAAGACCGGCGCACCACGGCGCTGATGGATCAGTCGATCCGCTTCC
TCGACCGGCTGGCGCTCTGGGAAAAACTGCGCCCGGCAGCCACACCTCTCTCCAGCATGCGCATCGTCGACGGCACCGAC
CGGCTGTTGCGCGCGCCGACGACCACCTTTCGCGCGGCCGAAGTGGGCCTTGACGCCTTCGGCTATAATTTCCCCAACAA
GGCGCTGATTGAGGTCCTCGAAACAGCGGTCGCCGGTGAGGGCAATATCACCCGCTTCACCGATATGGCCGAATCGATCG
CGATATCAGCCGAATCCGTGTCGATCACCCTTACCGGCGGCGAGACGCTGACAGCCGATTTTGCTGTCGGCGCCGATGGC
CGCGGCTCGAAGCTGCGCGAGACGGCTGGTATCGGCGTCCGCAACTGGTCCTATCCGCAATCGGCCATGGTGCTGAATTT
CGCCCATTCGCTGCCGCACCAGAATATCTCGACGGAATTCCACACCAAACACGGCCCTTTCACCCAGGTGCCGCTGCCGC
AAGGCCGCTCCAGCCTCGTCTGGGTGCAGGAGCCCGCTGAGGCCGCAAGCCGTATGGATTTGCCTCTGGCCGAACTCGGG
CTTCTCGTCGAGGCACGCATGCAATCCATGCTCGGCAAGGTCGACGTGGAGGAGGGCGTCCAGGTCTGGCCGCTCTCCGG
CATGATGGCGCATCGTTTCGGCAAGGGGCGCATCGCGCTGATCGGCGAGGCTGCCCATGTCTTCCCGCCGATCGGGGCGC
AGGGGCTGAACCTCAGCCTGCGCGATACCATGGCGCTGACCGAGATCCTCTGCGAGCGGGCCGAATTGCCGGTGCCGGCC
GATGCCGGCGAAAGCTTCGACCGCAAGCGCCGCGCCGATATCATGACGCGCACGGCAAGCGTCGATCTTCTCAACCGCTC
GCTGCTTTCGGATTTCCTGCCGGTGCAGATGCTGCGGGCTGCCGGCCTGCATATCCTCTCGGCCATTCCGCCGCTGCGCA
GCATCGTCATGCGCGAGGGCATCGAGCCCGGCCGCGGCTTCCGCGATATTCCGGAGTCCTTAAGGGAAAAGCTGAAGCGG
AAGAAAGCCTGA

Upstream 100 bases:

>100_bases
GCGTGACGCCGAAGCCGGCAAGGGCTATAGTTGGCGCCGTCAGGCGAAGCCGGCCGCATAAGCGGACCGCTCCGTCTTTT
CAGGATGACGGAACGGTAGC

Downstream 100 bases:

>100_bases
GCGGATAGCGATCAGCCAGAGCGAAACGCTGACCACCGAAAGCACCGTGGTGATCAGGATCGTCGCCGAGGCGCGCTCCT
GCCACACGCCATATTGCTGG

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKTFEVAVIGGGLAGMIAAIALARGGRSVALVAPVAAREDRRTTALMDQSIRFLDRLALWEKLRPAATPLSSMRIVDGTD
RLLRAPTTTFRAAEVGLDAFGYNFPNKALIEVLETAVAGEGNITRFTDMAESIAISAESVSITLTGGETLTADFAVGADG
RGSKLRETAGIGVRNWSYPQSAMVLNFAHSLPHQNISTEFHTKHGPFTQVPLPQGRSSLVWVQEPAEAASRMDLPLAELG
LLVEARMQSMLGKVDVEEGVQVWPLSGMMAHRFGKGRIALIGEAAHVFPPIGAQGLNLSLRDTMALTEILCERAELPVPA
DAGESFDRKRRADIMTRTASVDLLNRSLLSDFLPVQMLRAAGLHILSAIPPLRSIVMREGIEPGRGFRDIPESLREKLKR
KKA

Sequences:

>Translated_403_residues
MKTFEVAVIGGGLAGMIAAIALARGGRSVALVAPVAAREDRRTTALMDQSIRFLDRLALWEKLRPAATPLSSMRIVDGTD
RLLRAPTTTFRAAEVGLDAFGYNFPNKALIEVLETAVAGEGNITRFTDMAESIAISAESVSITLTGGETLTADFAVGADG
RGSKLRETAGIGVRNWSYPQSAMVLNFAHSLPHQNISTEFHTKHGPFTQVPLPQGRSSLVWVQEPAEAASRMDLPLAELG
LLVEARMQSMLGKVDVEEGVQVWPLSGMMAHRFGKGRIALIGEAAHVFPPIGAQGLNLSLRDTMALTEILCERAELPVPA
DAGESFDRKRRADIMTRTASVDLLNRSLLSDFLPVQMLRAAGLHILSAIPPLRSIVMREGIEPGRGFRDIPESLREKLKR
KKA
>Mature_403_residues
MKTFEVAVIGGGLAGMIAAIALARGGRSVALVAPVAAREDRRTTALMDQSIRFLDRLALWEKLRPAATPLSSMRIVDGTD
RLLRAPTTTFRAAEVGLDAFGYNFPNKALIEVLETAVAGEGNITRFTDMAESIAISAESVSITLTGGETLTADFAVGADG
RGSKLRETAGIGVRNWSYPQSAMVLNFAHSLPHQNISTEFHTKHGPFTQVPLPQGRSSLVWVQEPAEAASRMDLPLAELG
LLVEARMQSMLGKVDVEEGVQVWPLSGMMAHRFGKGRIALIGEAAHVFPPIGAQGLNLSLRDTMALTEILCERAELPVPA
DAGESFDRKRRADIMTRTASVDLLNRSLLSDFLPVQMLRAAGLHILSAIPPLRSIVMREGIEPGRGFRDIPESLREKLKR
KKA

Specific function: Oxygenase That Introduces The Hydroxyl Group At Carbon Five Of 2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol Resulting In The Formation Of 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Escherichia coli, GI1786883, Length=375, Percent_Identity=28.5333333333333, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1789273, Length=411, Percent_Identity=27.4939172749392, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1789274, Length=391, Percent_Identity=27.3657289002558, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786543, Length=325, Percent_Identity=24.9230769230769, Blast_Score=72, Evalue=7e-14,
Organism=Drosophila melanogaster, GI19920760, Length=387, Percent_Identity=23.7726098191214, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 43577; Mature: 43577

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFEVAVIGGGLAGMIAAIALARGGRSVALVAPVAAREDRRTTALMDQSIRFLDRLALW
CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHH
EKLRPAATPLSSMRIVDGTDRLLRAPTTTFRAAEVGLDAFGYNFPNKALIEVLETAVAGE
HHHCHHCCCHHCEEEECCCHHHHHCCCCHHHHHHHCHHHHCCCCCHHHHHHHHHHHHCCC
GNITRFTDMAESIAISAESVSITLTGGETLTADFAVGADGRGSKLRETAGIGVRNWSYPQ
CCCHHHHHHHHHHEEEECEEEEEEECCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCC
SAMVLNFAHSLPHQNISTEFHTKHGPFTQVPLPQGRSSLVWVQEPAEAASRMDLPLAELG
HHHHHHHHHHCCCCCCCCCEECCCCCEECCCCCCCCCCEEEEECHHHHHHHCCCCHHHHH
LLVEARMQSMLGKVDVEEGVQVWPLSGMMAHRFGKGRIALIGEAAHVFPPIGAQGLNLSL
HHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHCCCCCEEEEECHHHHCCCCCCCCCCEEH
RDTMALTEILCERAELPVPADAGESFDRKRRADIMTRTASVDLLNRSLLSDFLPVQMLRA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLHILSAIPPLRSIVMREGIEPGRGFRDIPESLREKLKRKKA
HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTFEVAVIGGGLAGMIAAIALARGGRSVALVAPVAAREDRRTTALMDQSIRFLDRLALW
CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHH
EKLRPAATPLSSMRIVDGTDRLLRAPTTTFRAAEVGLDAFGYNFPNKALIEVLETAVAGE
HHHCHHCCCHHCEEEECCCHHHHHCCCCHHHHHHHCHHHHCCCCCHHHHHHHHHHHHCCC
GNITRFTDMAESIAISAESVSITLTGGETLTADFAVGADGRGSKLRETAGIGVRNWSYPQ
CCCHHHHHHHHHHEEEECEEEEEEECCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCC
SAMVLNFAHSLPHQNISTEFHTKHGPFTQVPLPQGRSSLVWVQEPAEAASRMDLPLAELG
HHHHHHHHHHCCCCCCCCCEECCCCCEECCCCCCCCCCEEEEECHHHHHHHCCCCHHHHH
LLVEARMQSMLGKVDVEEGVQVWPLSGMMAHRFGKGRIALIGEAAHVFPPIGAQGLNLSL
HHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHCCCCCEEEEECHHHHCCCCCCCCCCEEH
RDTMALTEILCERAELPVPADAGESFDRKRRADIMTRTASVDLLNRSLLSDFLPVQMLRA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLHILSAIPPLRSIVMREGIEPGRGFRDIPESLREKLKRKKA
HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydroxylation [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]