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The map label for this gene is yqgF [C]

Identifier: 209549118

GI number: 209549118

Start: 1547717

End: 1548208

Strand: Reverse

Name: yqgF [C]

Synonym: Rleg2_1518

Alternate gene names: 209549118

Gene position: 1548208-1547717 (Counterclockwise)

Preceding gene: 209549125

Following gene: 209549114

Centisome position: 34.12

GC content: 63.41

Gene sequence:

>492_bases
ATGACGGTGCTGACGATCGAGGAAATGGCCGAGACGCTTGCCCCGCGGCAGGCGATTGCCGGCCTCGATCTCGGCACCAA
GACGATCGGGCTTTCGATGTCCGATCTCGGGCGGCGTTTCGCCACGCCCCGCCCAGTGATCCGACGCGTCAAGTTCACCA
TCGATGCGCAGGCGCTCATGGATTTTGCGACAGCGGAAAAGGTCGCGGGATTCGTCATCGGCCTGCCGATGAACATGGAC
GGATCGGCAGGTCCGCGGGTGCAGGCGACACGCGCCTTCGTGCGCAACATGGAGCAAAAGACGGCGCTGCCCTTTGTCTA
CTGGGACGAGCGGTTATCGACGGTGGCGGCTGAACGGACGCTGCTCGAAATGGACGTCTCGCGCGCCAAGCGGGCCGAAC
GGATCGATTCGGCCGCCGCGAGCTTCATCCTTCAAGGCGCGCTCGACAGGCTTTCCTTGCTGGCGAGATCCGATGGAGAC
GAATTCAGCTGA

Upstream 100 bases:

>100_bases
ACGTGATGCAAAAGCCTGTTTGGATGCTATGGACATATCTCATGCGCCGCCAAAGGAAAGCGGCGGCGACTTCAATTTCT
TTTGACGGGATGAAATGGCG

Downstream 100 bases:

>100_bases
CGCGCCCTCCACCAGGCGACGATCGACCTGCGTTTCCGGAAGCCGAGGATGGCGAAGACGACGAGACTGTCGACCGCGAT
CGCACGGGCAACGAGCGGCG

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTVLTIEEMAETLAPRQAIAGLDLGTKTIGLSMSDLGRRFATPRPVIRRVKFTIDAQALMDFATAEKVAGFVIGLPMNMD
GSAGPRVQATRAFVRNMEQKTALPFVYWDERLSTVAAERTLLEMDVSRAKRAERIDSAAASFILQGALDRLSLLARSDGD
EFS

Sequences:

>Translated_163_residues
MTVLTIEEMAETLAPRQAIAGLDLGTKTIGLSMSDLGRRFATPRPVIRRVKFTIDAQALMDFATAEKVAGFVIGLPMNMD
GSAGPRVQATRAFVRNMEQKTALPFVYWDERLSTVAAERTLLEMDVSRAKRAERIDSAAASFILQGALDRLSLLARSDGD
EFS
>Mature_162_residues
TVLTIEEMAETLAPRQAIAGLDLGTKTIGLSMSDLGRRFATPRPVIRRVKFTIDAQALMDFATAEKVAGFVIGLPMNMDG
SAGPRVQATRAFVRNMEQKTALPFVYWDERLSTVAAERTLLEMDVSRAKRAERIDSAAASFILQGALDRLSLLARSDGDE
FS

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=129, Percent_Identity=31.0077519379845, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 17853; Mature: 17722

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLTIEEMAETLAPRQAIAGLDLGTKTIGLSMSDLGRRFATPRPVIRRVKFTIDAQALM
CEEEEHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHH
DFATAEKVAGFVIGLPMNMDGSAGPRVQATRAFVRNMEQKTALPFVYWDERLSTVAAERT
HHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH
LLEMDVSRAKRAERIDSAAASFILQGALDRLSLLARSDGDEFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVLTIEEMAETLAPRQAIAGLDLGTKTIGLSMSDLGRRFATPRPVIRRVKFTIDAQALM
EEEEHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHH
DFATAEKVAGFVIGLPMNMDGSAGPRVQATRAFVRNMEQKTALPFVYWDERLSTVAAERT
HHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHH
LLEMDVSRAKRAERIDSAAASFILQGALDRLSLLARSDGDEFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA