| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549015
Identifier: 209549015
GI number: 209549015
Start: 1432206
End: 1433474
Strand: Direct
Name: 209549015
Synonym: Rleg2_1412
Alternate gene names: NA
Gene position: 1432206-1433474 (Clockwise)
Preceding gene: 209549012
Following gene: 209549021
Centisome position: 31.56
GC content: 61.39
Gene sequence:
>1269_bases ATGTCAGAAAACGAGTATTCTCGATCGAACTCCGTGCTGCCGGGATCCGACGAACCCGAGAAGCCGGCGGAGCGTTATCA ACTCGGCCTTTGCCTTTCCGGCGGCGGCTATCGGGCCATGCTTTTCCATGCGGGATCGTTGGCGAGGCTGAACGAGGCCG GTCTTCTGGCGAAGCTCGATATCATCTCCTCGGTCTCAGGCGGATCGATCGCCTCCGGCCTGCTCGCCTATGTGTGGCCG CGGCTGGTCTTTGAGAACGGTGTCGCCGTCAATTTCAGAACCGAATATGTCGATCGCATTCTGGCCTTCAGCCAGGTCTT TGCCGATGGGCCGAGCTTTCTGAAGGGCGTGTTCAATCCCTTCTCGAGCGCGGCCGAGGAAGCCGCCAAACTCTACGAGC GATATCTGTTCGACGGAAAATCGCCAAGCCTGAGGGATCTTCCAAGCTCGCCCTGGTTCGTCTTCTGCGCCAGCAATCTC CGCACCGGTTCGCTCTTCCGCATGTCGAACCGCTATATCGCGGATTACCGGATCGGCGTGTCGTTTCATCCGGCATTGTC GCTCGCGACCGCGGTTGCCGCTTCGGCGGCATTCCCGCCCGTGCTGTCACCGCTGCGATTGGACCTGTCGCAGTTTTCAT GGGAGAGAGAAAAACTCGACGGCACCGTCGGCGAACCCGTTGCGCCGGGCCGGGCAATCCTCAGCGACGGCGGCGTTTAC GACAATCATGGCATCGAGCCGGCGTTGAAACGCTGCGACTGCCTGCTCGTCGCCGATGCCGGAGCGCCTTGGCGCTCCTC CACCCGCGGATACTGGAACTATCTCAGCCAACTGAAGCGTGTTCTCGACACCACCGACAATCAGGTGAGGTCGTTGCGGC GGCGAGACCTGATCGGCAGCTTCAATGCGGCAAAGCAGGCTGAGATGCTTGGTCTCGACGATCTCTCGAAATCGGCTTTG CGGGCGAGAACGCGCGGTGTCTATTGGTCGATCGACAGCAAGGAGGCCGAACTCGCGCCCTATGCGTCTTACGCGCTGCC GCCGTCGTCGGTCATTCCCTCCGACGTCGGCACCTACCTTCATTTCCTCGGCCCCGAGGAGACGGAGTATCTGACGAATT GGGGGCACCATGTCTGCGACGCGATGCTCAATCGGTTCTATCAATCGCCGCTGGCGCCATCCTCTGGCCCGCCGCTGACT GGCGGGAGCGTCAAGCCCTCGTGGGCGGCGAGCGCCAGCAAGCGCATGTTCGACTTCCTGCCCTTTTGA
Upstream 100 bases:
>100_bases GCCGGACGCCGATCTCTTGGCAATCCGTTCTTTCATTCCTTTGCGCCGGTCTCGATCTGATACAAATGTCGCCATCCTTC TTAACGTGATACGACGGAGC
Downstream 100 bases:
>100_bases ACGCACGCCAAGGGGCCGACTAAAGTTTTGGTTGATTGTTGTCCCACGAAAAAGCCGGGCTTAGCAGCCCGGCTTTTTTC CAGTCTGTCAGGTTATACTC
Product: patatin
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Alpha-Beta Hydrolase Family Esterase
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSENEYSRSNSVLPGSDEPEKPAERYQLGLCLSGGGYRAMLFHAGSLARLNEAGLLAKLDIISSVSGGSIASGLLAYVWP RLVFENGVAVNFRTEYVDRILAFSQVFADGPSFLKGVFNPFSSAAEEAAKLYERYLFDGKSPSLRDLPSSPWFVFCASNL RTGSLFRMSNRYIADYRIGVSFHPALSLATAVAASAAFPPVLSPLRLDLSQFSWEREKLDGTVGEPVAPGRAILSDGGVY DNHGIEPALKRCDCLLVADAGAPWRSSTRGYWNYLSQLKRVLDTTDNQVRSLRRRDLIGSFNAAKQAEMLGLDDLSKSAL RARTRGVYWSIDSKEAELAPYASYALPPSSVIPSDVGTYLHFLGPEETEYLTNWGHHVCDAMLNRFYQSPLAPSSGPPLT GGSVKPSWAASASKRMFDFLPF
Sequences:
>Translated_422_residues MSENEYSRSNSVLPGSDEPEKPAERYQLGLCLSGGGYRAMLFHAGSLARLNEAGLLAKLDIISSVSGGSIASGLLAYVWP RLVFENGVAVNFRTEYVDRILAFSQVFADGPSFLKGVFNPFSSAAEEAAKLYERYLFDGKSPSLRDLPSSPWFVFCASNL RTGSLFRMSNRYIADYRIGVSFHPALSLATAVAASAAFPPVLSPLRLDLSQFSWEREKLDGTVGEPVAPGRAILSDGGVY DNHGIEPALKRCDCLLVADAGAPWRSSTRGYWNYLSQLKRVLDTTDNQVRSLRRRDLIGSFNAAKQAEMLGLDDLSKSAL RARTRGVYWSIDSKEAELAPYASYALPPSSVIPSDVGTYLHFLGPEETEYLTNWGHHVCDAMLNRFYQSPLAPSSGPPLT GGSVKPSWAASASKRMFDFLPF >Mature_421_residues SENEYSRSNSVLPGSDEPEKPAERYQLGLCLSGGGYRAMLFHAGSLARLNEAGLLAKLDIISSVSGGSIASGLLAYVWPR LVFENGVAVNFRTEYVDRILAFSQVFADGPSFLKGVFNPFSSAAEEAAKLYERYLFDGKSPSLRDLPSSPWFVFCASNLR TGSLFRMSNRYIADYRIGVSFHPALSLATAVAASAAFPPVLSPLRLDLSQFSWEREKLDGTVGEPVAPGRAILSDGGVYD NHGIEPALKRCDCLLVADAGAPWRSSTRGYWNYLSQLKRVLDTTDNQVRSLRRRDLIGSFNAAKQAEMLGLDDLSKSALR ARTRGVYWSIDSKEAELAPYASYALPPSSVIPSDVGTYLHFLGPEETEYLTNWGHHVCDAMLNRFYQSPLAPSSGPPLTG GSVKPSWAASASKRMFDFLPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46174; Mature: 46042
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENEYSRSNSVLPGSDEPEKPAERYQLGLCLSGGGYRAMLFHAGSLARLNEAGLLAKLD CCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCEEEEEEECCCHHHHCCCCCEEHHH IISSVSGGSIASGLLAYVWPRLVFENGVAVNFRTEYVDRILAFSQVFADGPSFLKGVFNP HHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHH FSSAAEEAAKLYERYLFDGKSPSLRDLPSSPWFVFCASNLRTGSLFRMSNRYIADYRIGV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEEECC SFHPALSLATAVAASAAFPPVLSPLRLDLSQFSWEREKLDGTVGEPVAPGRAILSDGGVY EECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC DNHGIEPALKRCDCLLVADAGAPWRSSTRGYWNYLSQLKRVLDTTDNQVRSLRRRDLIGS CCCCCCHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC FNAAKQAEMLGLDDLSKSALRARTRGVYWSIDSKEAELAPYASYALPPSSVIPSDVGTYL CCHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCCCCCCCHHHHHHH HFLGPEETEYLTNWGHHVCDAMLNRFYQSPLAPSSGPPLTGGSVKPSWAASASKRMFDFL HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC PF CC >Mature Secondary Structure SENEYSRSNSVLPGSDEPEKPAERYQLGLCLSGGGYRAMLFHAGSLARLNEAGLLAKLD CCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCEEEEEEECCCHHHHCCCCCEEHHH IISSVSGGSIASGLLAYVWPRLVFENGVAVNFRTEYVDRILAFSQVFADGPSFLKGVFNP HHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHH FSSAAEEAAKLYERYLFDGKSPSLRDLPSSPWFVFCASNLRTGSLFRMSNRYIADYRIGV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEEECC SFHPALSLATAVAASAAFPPVLSPLRLDLSQFSWEREKLDGTVGEPVAPGRAILSDGGVY EECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC DNHGIEPALKRCDCLLVADAGAPWRSSTRGYWNYLSQLKRVLDTTDNQVRSLRRRDLIGS CCCCCCHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC FNAAKQAEMLGLDDLSKSALRARTRGVYWSIDSKEAELAPYASYALPPSSVIPSDVGTYL CCHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHCCCCCCCCCHHHHHHH HFLGPEETEYLTNWGHHVCDAMLNRFYQSPLAPSSGPPLTGGSVKPSWAASASKRMFDFL HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC PF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA