| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ubiE [H]
Identifier: 209548995
GI number: 209548995
Start: 1414225
End: 1415067
Strand: Direct
Name: ubiE [H]
Synonym: Rleg2_1392
Alternate gene names: 209548995
Gene position: 1414225-1415067 (Clockwise)
Preceding gene: 209548991
Following gene: 209548996
Centisome position: 31.16
GC content: 62.4
Gene sequence:
>843_bases GTGACAATTTCTGCTGACATCGAAAACGGCGCTCCCGCCACCTCTGCCCCACCATTCGATGAAGGTATGGCCGAGCTTTA CCAGACCCTCCTGGTGCCGATCCTCTTCGCGCCTTATGCGACCGAGATGGCGATCGCCGCCGACCAGTCGAAACCTGGAA GCGTTCTCGAACTCGCTGCGGGGACGGGCGCCTTGACGCGCGCCCTGCGCGCGACGCTTGATCCGCCAACGGAAATTGTT GCCACCGACCTCAGCCAGGCGATGATCGACATCGGCGCGCCGACGGTGACGATGTCGCGGACCCACTGGATGCACGCCGA TGCGCAAAATCTTCCCTTCGCGCCGGAGATGTTCGATCTGGTCATCTGCCAGTTCGGCGCAATGTTCTTTCCCGACAAGG TGAAGGCCTATAGCGAGGCAGAAAGAGTGTTGCGCAGCAAAGGCCGGTTTCTGTTTTCGACGTGGGATTCACTCTCGGTC AACGACTTCGCGAGCTGTGTCGACGAATGCCTGGCAGGTCTCTTCCCATCCGACCCTCCGGATTTTCTCCGGCGCTTGCC ATACTCCTACTTCGACCCCGGCGCCATCAAGGCGCAGATGTCTTCGGCAGGATTTGAGGCAGTGACCTGCGATCGGCTCG AATTGACCTCCGTCGCCGCCAGCGCGCACGACGTCGCAGCCGCATTCTGCCAGGGCACGCTTCTGCGGGGCGAGATCGAA TGGCGGGCGCCGGAACGCATGTCCGAAATCGTCGATGAGGTGGCCGAGCGCGTGGAAGCGCGGCACGGAACTCGTCCTAG CGGCGGCATGAGCGCCTTGGTCGTCGCCGGCCGCGTTTCGTAA
Upstream 100 bases:
>100_bases TCGGTCTGACAGGCCTCGGACCTAGGTCCGGGCCCCGTAGACGTCACCAGATTCAGTCATATTTCAGCACTGACTGGTTC GGGGTTCTGGAGATTTGCGA
Downstream 100 bases:
>100_bases TTCCCTCGGCCGAGTGCCGGCGCATTAATCATACAATTCCTACAATCATCCTCTCATTTTATAATCATTCTTAATTGGAA CATGCTTCACTCGTCCGAAG
Product: type 11 methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTISADIENGAPATSAPPFDEGMAELYQTLLVPILFAPYATEMAIAADQSKPGSVLELAAGTGALTRALRATLDPPTEIV ATDLSQAMIDIGAPTVTMSRTHWMHADAQNLPFAPEMFDLVICQFGAMFFPDKVKAYSEAERVLRSKGRFLFSTWDSLSV NDFASCVDECLAGLFPSDPPDFLRRLPYSYFDPGAIKAQMSSAGFEAVTCDRLELTSVAASAHDVAAAFCQGTLLRGEIE WRAPERMSEIVDEVAERVEARHGTRPSGGMSALVVAGRVS
Sequences:
>Translated_280_residues MTISADIENGAPATSAPPFDEGMAELYQTLLVPILFAPYATEMAIAADQSKPGSVLELAAGTGALTRALRATLDPPTEIV ATDLSQAMIDIGAPTVTMSRTHWMHADAQNLPFAPEMFDLVICQFGAMFFPDKVKAYSEAERVLRSKGRFLFSTWDSLSV NDFASCVDECLAGLFPSDPPDFLRRLPYSYFDPGAIKAQMSSAGFEAVTCDRLELTSVAASAHDVAAAFCQGTLLRGEIE WRAPERMSEIVDEVAERVEARHGTRPSGGMSALVVAGRVS >Mature_279_residues TISADIENGAPATSAPPFDEGMAELYQTLLVPILFAPYATEMAIAADQSKPGSVLELAAGTGALTRALRATLDPPTEIVA TDLSQAMIDIGAPTVTMSRTHWMHADAQNLPFAPEMFDLVICQFGAMFFPDKVKAYSEAERVLRSKGRFLFSTWDSLSVN DFASCVDECLAGLFPSDPPDFLRRLPYSYFDPGAIKAQMSSAGFEAVTCDRLELTSVAASAHDVAAAFCQGTLLRGEIEW RAPERMSEIVDEVAERVEARHGTRPSGGMSALVVAGRVS
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Escherichia coli, GI48994983, Length=183, Percent_Identity=27.8688524590164, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 30120; Mature: 29989
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISADIENGAPATSAPPFDEGMAELYQTLLVPILFAPYATEMAIAADQSKPGSVLELAA CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCEEEECC GTGALTRALRATLDPPTEIVATDLSQAMIDIGAPTVTMSRTHWMHADAQNLPFAPEMFDL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCHHHHHH VICQFGAMFFPDKVKAYSEAERVLRSKGRFLFSTWDSLSVNDFASCVDECLAGLFPSDPP HHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCH DFLRRLPYSYFDPGAIKAQMSSAGFEAVTCDRLELTSVAASAHDVAAAFCQGTLLRGEIE HHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCHHEECEEC WRAPERMSEIVDEVAERVEARHGTRPSGGMSALVVAGRVS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC >Mature Secondary Structure TISADIENGAPATSAPPFDEGMAELYQTLLVPILFAPYATEMAIAADQSKPGSVLELAA EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCEEEECC GTGALTRALRATLDPPTEIVATDLSQAMIDIGAPTVTMSRTHWMHADAQNLPFAPEMFDL CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCHHHHHH VICQFGAMFFPDKVKAYSEAERVLRSKGRFLFSTWDSLSVNDFASCVDECLAGLFPSDPP HHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCH DFLRRLPYSYFDPGAIKAQMSSAGFEAVTCDRLELTSVAASAHDVAAAFCQGTLLRGEIE HHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCHHEECEEC WRAPERMSEIVDEVAERVEARHGTRPSGGMSALVVAGRVS CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA