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The map label for this gene is yedY [H]

Identifier: 209548963

GI number: 209548963

Start: 1378304

End: 1379251

Strand: Reverse

Name: yedY [H]

Synonym: Rleg2_1360

Alternate gene names: 209548963

Gene position: 1379251-1378304 (Counterclockwise)

Preceding gene: 209548965

Following gene: 209548962

Centisome position: 30.39

GC content: 61.92

Gene sequence:

>948_bases
ATGCCCAGCTATCGCCCACCGAAGATCGCGTCGTCGGAGATCACGCCGCACCAGCTCTATCTGCGCCGCCGTGAATTCCT
CGGTGCTGCAGCACTCGGCGCCATGGCGCTCTACGGCGCCGGCACTGCGAGTGCGGCCGCCCTTTCCGCCGTCGAAAGCA
AATACAAAGTCGACGAGAAGCCGACGCCGATCAAGGACGTCACGACCTACAACAATTTCTATGAATTCGGCCTCGACAAG
GGCGATCCGGCGGCGAATTCCGGCGATTTCAAGCCGCTGCCCTGGACGATCAAGGTCGACGGCATGGTCAACAAACCTGG
CACCTTCGACCTCGAGGCACTGATCAAGGAATTCCCGATCGAGGAGCGCACCTACCGCATGCGCTGCGTCGAGGCCTGGT
CGATGGTTATTCCCTGGGACGGCTTTCCGCTGGCATCGCTGCTCGACAAGGTCGAGCCGCTCGGGAGCGCCAAATATGTC
GCCTTCGAAACCGTGGTGCGACCGGACGAAATGCCGGGACAGAAGGGCTTCTTCCAGTCGCTCGACTGGCCCTATATCGA
GGGTCTGCGCCTCGACGAGGCGCGTCATCCGCTGACGCTGCTTGCCGTCGGGCTATATGGCGAAACGCTGCCGAACCAGA
ACGGCGCGCCGATCCGCCTCGTCGTGCCGTGGAAATACGGCTTCAAGGGCATCAAATCGATCGTCAGGATGACGCTCACC
GACCAGCAGCCGAAGAATACCTGGCAGGTGACCAATCCGCAGGAATACGGCTTCTACGCCAACGTCAACCCTGCGGTCGA
CCATCCGCGCTGGAGCCAGGCGAGCGAGCGGCGCATCGGTGAAAGCGGTTTCTTCGGCGCGAGCCGCCATCCCACCCTGC
CCTTCAACGGTTATGCCGACGAGGTGGCGAGCCTTTATGCCGGCATGGATCTGAAGGCGAATTTCTGA

Upstream 100 bases:

>100_bases
CAAAACCGCTACACACTTTTGCGCGACATGCTTTAATCCGAATATGCGGGCGGTTCGTTTAGAGACTATATTCGGGAAAC
CCGCCCTGGAGGTTTTCGAC

Downstream 100 bases:

>100_bases
TGGCGGAATTGTCGCTCGCCATCCCGAAGCGCTGGCAGCCCGCTTCCGTCTGGCTGCTTTATGTCGTGGGGCTCGCGCCT
GCGGCCTGGACCTTCTATCT

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPSYRPPKIASSEITPHQLYLRRREFLGAAALGAMALYGAGTASAAALSAVESKYKVDEKPTPIKDVTTYNNFYEFGLDK
GDPAANSGDFKPLPWTIKVDGMVNKPGTFDLEALIKEFPIEERTYRMRCVEAWSMVIPWDGFPLASLLDKVEPLGSAKYV
AFETVVRPDEMPGQKGFFQSLDWPYIEGLRLDEARHPLTLLAVGLYGETLPNQNGAPIRLVVPWKYGFKGIKSIVRMTLT
DQQPKNTWQVTNPQEYGFYANVNPAVDHPRWSQASERRIGESGFFGASRHPTLPFNGYADEVASLYAGMDLKANF

Sequences:

>Translated_315_residues
MPSYRPPKIASSEITPHQLYLRRREFLGAAALGAMALYGAGTASAAALSAVESKYKVDEKPTPIKDVTTYNNFYEFGLDK
GDPAANSGDFKPLPWTIKVDGMVNKPGTFDLEALIKEFPIEERTYRMRCVEAWSMVIPWDGFPLASLLDKVEPLGSAKYV
AFETVVRPDEMPGQKGFFQSLDWPYIEGLRLDEARHPLTLLAVGLYGETLPNQNGAPIRLVVPWKYGFKGIKSIVRMTLT
DQQPKNTWQVTNPQEYGFYANVNPAVDHPRWSQASERRIGESGFFGASRHPTLPFNGYADEVASLYAGMDLKANF
>Mature_314_residues
PSYRPPKIASSEITPHQLYLRRREFLGAAALGAMALYGAGTASAAALSAVESKYKVDEKPTPIKDVTTYNNFYEFGLDKG
DPAANSGDFKPLPWTIKVDGMVNKPGTFDLEALIKEFPIEERTYRMRCVEAWSMVIPWDGFPLASLLDKVEPLGSAKYVA
FETVVRPDEMPGQKGFFQSLDWPYIEGLRLDEARHPLTLLAVGLYGETLPNQNGAPIRLVVPWKYGFKGIKSIVRMTLTD
QQPKNTWQVTNPQEYGFYANVNPAVDHPRWSQASERRIGESGFFGASRHPTLPFNGYADEVASLYAGMDLKANF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=332, Percent_Identity=53.9156626506024, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 35153; Mature: 35022

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSYRPPKIASSEITPHQLYLRRREFLGAAALGAMALYGAGTASAAALSAVESKYKVDEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PTPIKDVTTYNNFYEFGLDKGDPAANSGDFKPLPWTIKVDGMVNKPGTFDLEALIKEFPI
CCCCHHHHHCCCHHEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHHCCC
EERTYRMRCVEAWSMVIPWDGFPLASLLDKVEPLGSAKYVAFETVVRPDEMPGQKGFFQS
CHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHC
LDWPYIEGLRLDEARHPLTLLAVGLYGETLPNQNGAPIRLVVPWKYGFKGIKSIVRMTLT
CCCCHHCCEEECCCCCCEEEEEEEHHHCCCCCCCCCCEEEEECCHHCHHHHHHHHHHHHC
DQQPKNTWQVTNPQEYGFYANVNPAVDHPRWSQASERRIGESGFFGASRHPTLPFNGYAD
CCCCCCCEEECCCHHCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHH
EVASLYAGMDLKANF
HHHHHHHCCCEECCC
>Mature Secondary Structure 
PSYRPPKIASSEITPHQLYLRRREFLGAAALGAMALYGAGTASAAALSAVESKYKVDEK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
PTPIKDVTTYNNFYEFGLDKGDPAANSGDFKPLPWTIKVDGMVNKPGTFDLEALIKEFPI
CCCCHHHHHCCCHHEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHHCCC
EERTYRMRCVEAWSMVIPWDGFPLASLLDKVEPLGSAKYVAFETVVRPDEMPGQKGFFQS
CHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHC
LDWPYIEGLRLDEARHPLTLLAVGLYGETLPNQNGAPIRLVVPWKYGFKGIKSIVRMTLT
CCCCHHCCEEECCCCCCEEEEEEEHHHCCCCCCCCCCEEEEECCHHCHHHHHHHHHHHHC
DQQPKNTWQVTNPQEYGFYANVNPAVDHPRWSQASERRIGESGFFGASRHPTLPFNGYAD
CCCCCCCEEECCCHHCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHH
EVASLYAGMDLKANF
HHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA