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The map label for this gene is aidB [H]

Identifier: 209548903

GI number: 209548903

Start: 1323469

End: 1325127

Strand: Direct

Name: aidB [H]

Synonym: Rleg2_1300

Alternate gene names: 209548903

Gene position: 1323469-1325127 (Clockwise)

Preceding gene: 209548893

Following gene: 209548906

Centisome position: 29.16

GC content: 65.7

Gene sequence:

>1659_bases
ATGACCTCCGCCAACCGGACTGACGAAAAACTCGCAGAACTCAACCAGCCGAGCCTGTGGTCCGGCATCAACGCCTATCG
GTCCGATCCGCTGATCGTCGACCTGACGGCGGCCCTGCCGCGCGGCATCCGCGAAGACCTGGAAAACATGGGTCGCTACG
TCACCTCGCCGGAGGCGCAGGAGCTGGCGCGCATGGCAAACCAGGGCGCGCCGCAGCTGCGCACCCACGGTCCGCGCGGC
GAGCGCCTCGACGTCGTCGAATTCCACCCCGCCTGGCACGCGCTGATGCGCCGCTCCATGTCGGTCGGCCTGCATTCCTC
CGTCTGGGATCCGCAGGCCGATGCAGATGCCAAGGATGAGGCCCACAAGGTTCGCGCCGCCCGCTTCTATCTGACCGCGC
AGCTGGAATCCGGCCATCTCTGCCCGCTGACGATGACCAGCGCCTCCGTTGCCGCGCTCTCGGCTTCGCCCGCCGTGCAG
AAGGACTGGGCGCCCAAAATCCTCTCGCGCAAATATGATTCGTCGAACAAACCCGCCATGCAGAAATCCGCCGTCACCAT
CGGCATGGGCATGACGGAAAAGCAGGGCGGCACGGATGTGCGCGCCAACCGCAGCGCTGCCGAAAAGGTCAGCGAAGGCA
TCTACCGACTATCAGGCCACAAATGGTTCATGTCGGCGCCGATGAGCGATGCCTTCATCATGCTGGCGCAGACGAAGGAG
GGCATGGGCTGCTTCCTCGTGCCGCGGCTGCTGGAGGATGGTTCGGCCAACGGCCTGCAGTTTCAGCGGCTGAAGGACAA
GGTCGGCAACCGCTCCAACGCCTCTTCGGAAGTGGAGTTTTCAGACACCTTCGGCTTCCTGCTCGGTGGCCCGGATGCCG
GCATCCGCACCATTCTCGACATGGTGACGCTGACGCGGCTCGACTGCGCGCTGGCCTCATCAGGCATGATGCGTGCCTCG
CTGGCCGAAGCCGTGCATCACACCCGCGGCCGCAGCGTCTTCGGCAAGATGCTCGTCAACCAGCCGATCATGACGCGCGT
GCTGGCCGACATGGCGCTTGACGTCGCCGCCGCCACCGCACTGTCCTTCCGTCTCGCCGACGCCTTCGACAAGGCGCGCG
GGAATGCCGAGCAGGCAGCCTATGCCCGCGTCATGACGCCGGTCGCTAAATACTGGTGCTGCAAGATCGCGCCTGCGCTG
ATCTACGAGGCGATGGAATGCATCGGCGGCAACGGCTATATCGAGGAACGCCCGATCGCCCGCCATTACCGCGAAGCGCC
CGTCAACGCCATCTGGGAAGGCTCCGGCAACGTCATGGCGCTCGACGTGCTGCGTGTGCTCAACCGCGGCAAGGATCTGT
TCGAGACGGTGTTCGCTGGCCTTGCCCGCGATCTCGGTCCCGCCGGCAAGAAGACGATCGACGTGCTGCGCGCCGCAATC
GCGCTTTGCGAACAGGATGAGGGCGCCGCGCGCCTGCTCGTCGAGCAGCTGGCGCTTGCCGCCGGTGCCGCCGAACTCTA
TCGGCTGGGGGCAGGGCGCATTGCCGATGCCTTCATCGAGACGCGCCTTGCCGGCGGCTGGCGCTCCACCTACGGCATGC
TCGATTCTCGCTTCGACGCCAGCTACATCGTCGACCTGCTCTATCCGCCAGCGGCCTGA

Upstream 100 bases:

>100_bases
TATGTCCCCATGCATTTTCGCCAAAATTCCGATAGAGCAGAATGAACCGAATCATAACTTCCGGTTTCCCTTTGCCGGGT
TCTTACACTAGAAGCGAATT

Downstream 100 bases:

>100_bases
CCGCAGGCGGGGTATTGTTCACGTCGCCTCGTCGATCCAATCGATAGCGAAGCGCTCCGCCGACGGCTGCCCCTCACCCT
AACCCTCTCCCCGTAAACGG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MTSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQELARMANQGAPQLRTHGPRG
ERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDEAHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQ
KDWAPKILSRKYDSSNKPAMQKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE
GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILDMVTLTRLDCALASSGMMRAS
LAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATALSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPAL
IYEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI
ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLYPPAA

Sequences:

>Translated_552_residues
MTSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQELARMANQGAPQLRTHGPRG
ERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDEAHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQ
KDWAPKILSRKYDSSNKPAMQKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE
GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILDMVTLTRLDCALASSGMMRAS
LAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATALSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPAL
IYEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI
ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLYPPAA
>Mature_551_residues
TSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQELARMANQGAPQLRTHGPRGE
RLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDEAHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQK
DWAPKILSRKYDSSNKPAMQKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKEG
MGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILDMVTLTRLDCALASSGMMRASL
AEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATALSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPALI
YEAMECIGGNGYIEERPIARHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAIA
LCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDASYIVDLLYPPAA

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=262, Percent_Identity=27.8625954198473, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI226958412, Length=306, Percent_Identity=24.8366013071895, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI226958414, Length=306, Percent_Identity=24.8366013071895, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI4557231, Length=267, Percent_Identity=26.9662921348315, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI187960098, Length=267, Percent_Identity=26.9662921348315, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI4501859, Length=252, Percent_Identity=23.4126984126984, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI4501857, Length=276, Percent_Identity=25.7246376811594, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI4557235, Length=390, Percent_Identity=23.3333333333333, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI76496475, Length=390, Percent_Identity=23.3333333333333, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI7656849, Length=265, Percent_Identity=27.5471698113208, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI87082384, Length=512, Percent_Identity=44.7265625, Blast_Score=417, Evalue=1e-118,
Organism=Caenorhabditis elegans, GI86563381, Length=452, Percent_Identity=30.5309734513274, Blast_Score=184, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI86563383, Length=452, Percent_Identity=30.5309734513274, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17538396, Length=305, Percent_Identity=26.5573770491803, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=269, Percent_Identity=24.1635687732342, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17506239, Length=267, Percent_Identity=22.0973782771536, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=297, Percent_Identity=21.5488215488215, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71985184, Length=268, Percent_Identity=26.1194029850746, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=269, Percent_Identity=23.7918215613383, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=323, Percent_Identity=23.5294117647059, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17533517, Length=274, Percent_Identity=24.4525547445255, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=262, Percent_Identity=25.5725190839695, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24646207, Length=272, Percent_Identity=25.3676470588235, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355753, Length=307, Percent_Identity=24.4299674267101, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24660351, Length=326, Percent_Identity=24.5398773006135, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363737, Length=305, Percent_Identity=22.6229508196721, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24666513, Length=263, Percent_Identity=20.9125475285171, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 59950; Mature: 59819

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ
CCCCCCCHHHHHHCCCCCHHHCCHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCHH
ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDE
HHHHHHHCCCCCHHCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
AHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM
HHHHHHEEEEEEEEECCCCCCEEEECCHHHHHHCCCCCHHHCCHHHHHHHCCCCCCCCCH
QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE
HHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCC
GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILD
CCCCEEHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCHHHHHHHH
MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI
HHHHHCCCCEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCH
SYIVDLLYPPAA
HHHHHHHCCCCC
>Mature Secondary Structure 
TSANRTDEKLAELNQPSLWSGINAYRSDPLIVDLTAALPRGIREDLENMGRYVTSPEAQ
CCCCCCHHHHHHCCCCCHHHCCHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCHH
ELARMANQGAPQLRTHGPRGERLDVVEFHPAWHALMRRSMSVGLHSSVWDPQADADAKDE
HHHHHHHCCCCCHHCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
AHKVRAARFYLTAQLESGHLCPLTMTSASVAALSASPAVQKDWAPKILSRKYDSSNKPAM
HHHHHHEEEEEEEEECCCCCCEEEECCHHHHHHCCCCCHHHCCHHHHHHHCCCCCCCCCH
QKSAVTIGMGMTEKQGGTDVRANRSAAEKVSEGIYRLSGHKWFMSAPMSDAFIMLAQTKE
HHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCC
GMGCFLVPRLLEDGSANGLQFQRLKDKVGNRSNASSEVEFSDTFGFLLGGPDAGIRTILD
CCCCEEHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCHHHHHHHH
MVTLTRLDCALASSGMMRASLAEAVHHTRGRSVFGKMLVNQPIMTRVLADMALDVAAATA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LSFRLADAFDKARGNAEQAAYARVMTPVAKYWCCKIAPALIYEAMECIGGNGYIEERPIA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RHYREAPVNAIWEGSGNVMALDVLRVLNRGKDLFETVFAGLARDLGPAGKKTIDVLRAAI
HHHHHCCCCEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALCEQDEGAARLLVEQLALAAGAAELYRLGAGRIADAFIETRLAGGWRSTYGMLDSRFDA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCH
SYIVDLLYPPAA
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]