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The map label for this gene is yqjC [H]

Identifier: 209548880

GI number: 209548880

Start: 1295523

End: 1295927

Strand: Direct

Name: yqjC [H]

Synonym: Rleg2_1277

Alternate gene names: 209548880

Gene position: 1295523-1295927 (Clockwise)

Preceding gene: 209548879

Following gene: 209548881

Centisome position: 28.55

GC content: 63.46

Gene sequence:

>405_bases
ATGCTTGGCCGGGTAAACCACATCGCCATCGCCGTTCCCGATCTGGCAGCGGCGACCGCCGCCTATCGCGACACGCTGGG
TGCTGCCGTATCGCAGCCGCAGGCTCTGCCGGAGCACGGCGTTACTGTGGTCTTCGTCGAATTGCCGAATACCAAGGTGG
AATTGCTGCAGCCGCTTGGGGAAACCTCGCCGATCGCAACCTTCCTGGAAAAGAACCCGTCCGGCGGCATGCACCACATC
TGTTATGAGGTGGACGATATCCTGCTTGCGCGTGACCGGCTGGTCGCGGCCGGGGCGAGGGTGCTCGGTGACGGCCAGCC
GAAGACCGGCGCGCATGGCAAGCCGGTGCTTTTCCTGCACCCCAAGGATTTCTTCGGCACGCTGATCGAACTCGAACAGG
CGTGA

Upstream 100 bases:

>100_bases
ACATGGTGCAGGAGGCCGTGCGCCGCGCCATCCGCGCCGCGGCAAACCATGCCTGGGGCAAGAAGCCGGTTGTCACCGCC
TTCGTCACCAAGGTCTGATC

Downstream 100 bases:

>100_bases
AGCCTGCGGCAGAATGCCCTCTAGGCGGCCACACGCTTCATCGGCTTTGAGTTGGCTGCCATTCCGCCGTATAAGGGCCG
AACTGGAAATGACAGAACGT

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLGRVNHIAIAVPDLAAATAAYRDTLGAAVSQPQALPEHGVTVVFVELPNTKVELLQPLGETSPIATFLEKNPSGGMHHI
CYEVDDILLARDRLVAAGARVLGDGQPKTGAHGKPVLFLHPKDFFGTLIELEQA

Sequences:

>Translated_134_residues
MLGRVNHIAIAVPDLAAATAAYRDTLGAAVSQPQALPEHGVTVVFVELPNTKVELLQPLGETSPIATFLEKNPSGGMHHI
CYEVDDILLARDRLVAAGARVLGDGQPKTGAHGKPVLFLHPKDFFGTLIELEQA
>Mature_134_residues
MLGRVNHIAIAVPDLAAATAAYRDTLGAAVSQPQALPEHGVTVVFVELPNTKVELLQPLGETSPIATFLEKNPSGGMHHI
CYEVDDILLARDRLVAAGARVLGDGQPKTGAHGKPVLFLHPKDFFGTLIELEQA

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=133, Percent_Identity=63.1578947368421, Blast_Score=163, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17506387, Length=133, Percent_Identity=59.3984962406015, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14239; Mature: 14239

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRVNHIAIAVPDLAAATAAYRDTLGAAVSQPQALPEHGVTVVFVELPNTKVELLQPLG
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHCC
ETSPIATFLEKNPSGGMHHICYEVDDILLARDRLVAAGARVLGDGQPKTGAHGKPVLFLH
CCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCCEEEEC
PKDFFGTLIELEQA
CHHHHHHHHEEECC
>Mature Secondary Structure
MLGRVNHIAIAVPDLAAATAAYRDTLGAAVSQPQALPEHGVTVVFVELPNTKVELLQPLG
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHCC
ETSPIATFLEKNPSGGMHHICYEVDDILLARDRLVAAGARVLGDGQPKTGAHGKPVLFLH
CCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCHHEECCCCCCCCCCCCCEEEEC
PKDFFGTLIELEQA
CHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]