Click here to switch to the map view.

The map label for this gene is exoP [H]

Identifier: 209548828

GI number: 209548828

Start: 1237398

End: 1239572

Strand: Direct

Name: exoP [H]

Synonym: Rleg2_1225

Alternate gene names: 209548828

Gene position: 1237398-1239572 (Clockwise)

Preceding gene: 209548823

Following gene: 209548831

Centisome position: 27.27

GC content: 63.82

Gene sequence:

>2175_bases
ATGTCCGGCGTAGCGCGTGATCAGGATGTGGACATCGACCTCGGCCAGTTGGTCCGCGCCGTCTGGGCGCGGCGGCTCAG
GATTTTGGCGATTACGCTTGCGGGGGCGGGCATCGCCTTTACAGGCGCCAAGATCATGTCGCCGCAATATCGCAGCGAAA
CACGCATCCTGATCGAACCCCGGGCGCCGGCCTTCGCCAGCACCCAGCAGGTCAACGACGCCGGCGCCGGCCCCCTGATG
GATGAGCTGAATATCGCCAGCCAAGTACAGCTGCTGCAATCGGCCGATCTCCTCAAGAAGGTCATCAACGATCTGAAGCT
TTATAACCTGCCGGAATTCGACGATGCCGCCAACGGCTCGGCGATGAGCAGTATCATGGTGAAGCTGCATCTGAAGAAGA
ACCCGATGGAGAACCCGCCGGAAGAGCGGGTGATCGACGCTGTCGTCGAACGCCTGCAGGTCTACCAGGTGCCGGGTTCA
CGCGTCATCGGCATCAGTTTCACCTCGAAGGACCCGAAGCTCGCTGCCGCCATTCCGAACGCCATGGCCAATGTCTATCT
TTCGACCCAGAGCGGCGCCAAGCTCGATTCCAATTCGGAAGCGACGCGCTGGCTAGAGCCGGAGATCGAAGGCCTGCGCC
GCAAGGTCAGCGAAGCCGAGAAGAAGGTCGCCGAATACCGCACCTCGCACGGGCTGCTGCAGACCAACGGCACCACCACC
TTTCCCGCCCAGCAGCTGAACGATATCTCCGCCGAACTGACCCGCGTGCGCGGCGACAAGGCCAATGCCGAGGCGAGGGC
GCAAGCGGTACGCAATGCGCTGTCTTCGGGCGAAGCCTCCGACACGCTGCCTGACATCATGTCGTCCCAGGCGATCCAGC
GGCTGAAGGCGACGGAATCCGGCCTGCAGTCGCAAATATCGGATCTGCAGACCAGCCTTCTCAACAATCACCCGCGGCTG
AAAAGCCTGCGCGCTCAGCTGGCCGACATCCGCACCCAAATCCGTCAGGAGACGCAGAAAATCCTGACGAGCATCGAGAA
CGAATCCAAGGTCGCGGATCTGAGGGCAAGCGAGCTCGAGCGCCAGTCGGACACGGTGCAGGCCAATAGCGCCCGCGCCG
GCGAGGACGAGGTCGGCCTCAATGCGCTGGAGCGCGAGGCGACCGCACAGCGCCAGCTGCTCGAAACCTATCTGGTGCGC
TACCGCGAAGCCGCTTCCCGCGCCGACAGCAATTCCAGCCCGGCGGATGCCCGTATCGTTTCCAAGGCCATCGAGCCGGT
CGATCCCTATTTCCCGAAGGTGGTGCCGATCGTCGTCGTCGCTGCCGTCGCCACTTTGATCCTGAGCGCCATCGTCACTA
TGCTGGCCGAACTCTTCAGCGGCCGGGCGCTTCGTCCCGTCGATGCGTCCCCCGAGACGATCGAGGCGGAAACTCTCGTC
GAGGAGAGGGTTGCGCCGCCGGCCGCTCCAGTTGTCGCTGCTGTCAGAAAGCCCATCCAGCCGAGCATGCTCGCCATTGT
CGGCGATGAAGACGAAAAGGACGCGATTGAAGACACCGAGGCCGCCGAGGAGCTGCCGGAGGACGACAATGAATTCTCCG
TTGCCTCCGTTGCGGACTATCTCACGGGCAGCCGCGCACCGTTGGCAATCGCAATATCTCCGACCGGTGACAATGGCTCG
GCGGCAACGGTTTTGCTGACCCGCATGCTCGCCGATGCCGGCCGCCGCGTCATCCTGATCGACATGACCGGTTCCGGCTA
CCCTACGGAATTGATGGCTGAGGACCAGGCTGCCCTTGGCGTCACCGATCTGCTCTGCGGCGAGGCCGCCTTCGGCGACA
CGATCCACAGCGATCGTCTTTCCGACGCCCATCTGATCCCCCAGGGGCAGAGCGACGTGCGCCGCGCCATGCGTGGTGTC
GACCGGCTGTCGCTGCTCCTCGATGCGCTTGCCGCCGCCTATGACCTCGTGGTGGTCGAATGCGGTTCGGCCGATGTCGC
CGGCGTCTCGCGGCTGACCCGCAGCCGCGATGTCGAGATCATCCTCTCCCTGCCGGAGATCGAGGAGACCATCTTCGTGA
CCCTGATGACGGACTTCCAGGCTGCCGGCTACGAGCGCGTCGTGCTGATGTCGGGTGGGGAAGGGGCTGAGCAGACGCTC
GGCAAGGCCGCTTAA

Upstream 100 bases:

>100_bases
TCCTTCACAGGCCGTCGCTTATTACTCGGCAAGATTGCCATTAACCGTTGAGTTACCATGGTCGTTTACGCTTGCGGCAC
ATTTGTTGTGGAGTAAGAGC

Downstream 100 bases:

>100_bases
ACGATCAGCCGATGCGTGCGCGGATGCTCTGCGTAAATTTATAGAGCTTCGGGCGGGCCTTGATATGGGCCTTGCCGCGG
GTGACGATCCGGTGCGCTGT

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 724; Mature: 723

Protein sequence:

>724_residues
MSGVARDQDVDIDLGQLVRAVWARRLRILAITLAGAGIAFTGAKIMSPQYRSETRILIEPRAPAFASTQQVNDAGAGPLM
DELNIASQVQLLQSADLLKKVINDLKLYNLPEFDDAANGSAMSSIMVKLHLKKNPMENPPEERVIDAVVERLQVYQVPGS
RVIGISFTSKDPKLAAAIPNAMANVYLSTQSGAKLDSNSEATRWLEPEIEGLRRKVSEAEKKVAEYRTSHGLLQTNGTTT
FPAQQLNDISAELTRVRGDKANAEARAQAVRNALSSGEASDTLPDIMSSQAIQRLKATESGLQSQISDLQTSLLNNHPRL
KSLRAQLADIRTQIRQETQKILTSIENESKVADLRASELERQSDTVQANSARAGEDEVGLNALEREATAQRQLLETYLVR
YREAASRADSNSSPADARIVSKAIEPVDPYFPKVVPIVVVAAVATLILSAIVTMLAELFSGRALRPVDASPETIEAETLV
EERVAPPAAPVVAAVRKPIQPSMLAIVGDEDEKDAIEDTEAAEELPEDDNEFSVASVADYLTGSRAPLAIAISPTGDNGS
AATVLLTRMLADAGRRVILIDMTGSGYPTELMAEDQAALGVTDLLCGEAAFGDTIHSDRLSDAHLIPQGQSDVRRAMRGV
DRLSLLLDALAAAYDLVVVECGSADVAGVSRLTRSRDVEIILSLPEIEETIFVTLMTDFQAAGYERVVLMSGGEGAEQTL
GKAA

Sequences:

>Translated_724_residues
MSGVARDQDVDIDLGQLVRAVWARRLRILAITLAGAGIAFTGAKIMSPQYRSETRILIEPRAPAFASTQQVNDAGAGPLM
DELNIASQVQLLQSADLLKKVINDLKLYNLPEFDDAANGSAMSSIMVKLHLKKNPMENPPEERVIDAVVERLQVYQVPGS
RVIGISFTSKDPKLAAAIPNAMANVYLSTQSGAKLDSNSEATRWLEPEIEGLRRKVSEAEKKVAEYRTSHGLLQTNGTTT
FPAQQLNDISAELTRVRGDKANAEARAQAVRNALSSGEASDTLPDIMSSQAIQRLKATESGLQSQISDLQTSLLNNHPRL
KSLRAQLADIRTQIRQETQKILTSIENESKVADLRASELERQSDTVQANSARAGEDEVGLNALEREATAQRQLLETYLVR
YREAASRADSNSSPADARIVSKAIEPVDPYFPKVVPIVVVAAVATLILSAIVTMLAELFSGRALRPVDASPETIEAETLV
EERVAPPAAPVVAAVRKPIQPSMLAIVGDEDEKDAIEDTEAAEELPEDDNEFSVASVADYLTGSRAPLAIAISPTGDNGS
AATVLLTRMLADAGRRVILIDMTGSGYPTELMAEDQAALGVTDLLCGEAAFGDTIHSDRLSDAHLIPQGQSDVRRAMRGV
DRLSLLLDALAAAYDLVVVECGSADVAGVSRLTRSRDVEIILSLPEIEETIFVTLMTDFQAAGYERVVLMSGGEGAEQTL
GKAA
>Mature_723_residues
SGVARDQDVDIDLGQLVRAVWARRLRILAITLAGAGIAFTGAKIMSPQYRSETRILIEPRAPAFASTQQVNDAGAGPLMD
ELNIASQVQLLQSADLLKKVINDLKLYNLPEFDDAANGSAMSSIMVKLHLKKNPMENPPEERVIDAVVERLQVYQVPGSR
VIGISFTSKDPKLAAAIPNAMANVYLSTQSGAKLDSNSEATRWLEPEIEGLRRKVSEAEKKVAEYRTSHGLLQTNGTTTF
PAQQLNDISAELTRVRGDKANAEARAQAVRNALSSGEASDTLPDIMSSQAIQRLKATESGLQSQISDLQTSLLNNHPRLK
SLRAQLADIRTQIRQETQKILTSIENESKVADLRASELERQSDTVQANSARAGEDEVGLNALEREATAQRQLLETYLVRY
REAASRADSNSSPADARIVSKAIEPVDPYFPKVVPIVVVAAVATLILSAIVTMLAELFSGRALRPVDASPETIEAETLVE
ERVAPPAAPVVAAVRKPIQPSMLAIVGDEDEKDAIEDTEAAEELPEDDNEFSVASVADYLTGSRAPLAIAISPTGDNGSA
ATVLLTRMLADAGRRVILIDMTGSGYPTELMAEDQAALGVTDLLCGEAAFGDTIHSDRLSDAHLIPQGQSDVRRAMRGVD
RLSLLLDALAAAYDLVVVECGSADVAGVSRLTRSRDVEIILSLPEIEETIFVTLMTDFQAAGYERVVLMSGGEGAEQTLG
KAA

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.solanacearum epsB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702
- InterPro:   IPR005700
- InterPro:   IPR003856 [H]

Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 77818; Mature: 77687

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVARDQDVDIDLGQLVRAVWARRLRILAITLAGAGIAFTGAKIMSPQYRSETRILIEP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEECCHHHCCCCCCCCCEEEECC
RAPAFASTQQVNDAGAGPLMDELNIASQVQLLQSADLLKKVINDLKLYNLPEFDDAANGS
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
AMSSIMVKLHLKKNPMENPPEERVIDAVVERLQVYQVPGSRVIGISFTSKDPKLAAAIPN
HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCHHHHHHH
AMANVYLSTQSGAKLDSNSEATRWLEPEIEGLRRKVSEAEKKVAEYRTSHGLLQTNGTTT
HHHHEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
FPAQQLNDISAELTRVRGDKANAEARAQAVRNALSSGEASDTLPDIMSSQAIQRLKATES
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GLQSQISDLQTSLLNNHPRLKSLRAQLADIRTQIRQETQKILTSIENESKVADLRASELE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RQSDTVQANSARAGEDEVGLNALEREATAQRQLLETYLVRYREAASRADSNSSPADARIV
HHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
SKAIEPVDPYFPKVVPIVVVAAVATLILSAIVTMLAELFSGRALRPVDASPETIEAETLV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
EERVAPPAAPVVAAVRKPIQPSMLAIVGDEDEKDAIEDTEAAEELPEDDNEFSVASVADY
HHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LTGSRAPLAIAISPTGDNGSAATVLLTRMLADAGRRVILIDMTGSGYPTELMAEDQAALG
HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCHHHHC
VTDLLCGEAAFGDTIHSDRLSDAHLIPQGQSDVRRAMRGVDRLSLLLDALAAAYDLVVVE
HHHHHHCCHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
CGSADVAGVSRLTRSRDVEIILSLPEIEETIFVTLMTDFQAAGYERVVLMSGGEGAEQTL
CCCCCHHHHHHHHHCCCCEEEEECCCCCHHEEEEEEHHHHCCCCCEEEEEECCCCHHHHH
GKAA
CCCC
>Mature Secondary Structure 
SGVARDQDVDIDLGQLVRAVWARRLRILAITLAGAGIAFTGAKIMSPQYRSETRILIEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEECCHHHCCCCCCCCCEEEECC
RAPAFASTQQVNDAGAGPLMDELNIASQVQLLQSADLLKKVINDLKLYNLPEFDDAANGS
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
AMSSIMVKLHLKKNPMENPPEERVIDAVVERLQVYQVPGSRVIGISFTSKDPKLAAAIPN
HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCHHHHHHH
AMANVYLSTQSGAKLDSNSEATRWLEPEIEGLRRKVSEAEKKVAEYRTSHGLLQTNGTTT
HHHHEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
FPAQQLNDISAELTRVRGDKANAEARAQAVRNALSSGEASDTLPDIMSSQAIQRLKATES
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
GLQSQISDLQTSLLNNHPRLKSLRAQLADIRTQIRQETQKILTSIENESKVADLRASELE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RQSDTVQANSARAGEDEVGLNALEREATAQRQLLETYLVRYREAASRADSNSSPADARIV
HHHCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
SKAIEPVDPYFPKVVPIVVVAAVATLILSAIVTMLAELFSGRALRPVDASPETIEAETLV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
EERVAPPAAPVVAAVRKPIQPSMLAIVGDEDEKDAIEDTEAAEELPEDDNEFSVASVADY
HHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LTGSRAPLAIAISPTGDNGSAATVLLTRMLADAGRRVILIDMTGSGYPTELMAEDQAALG
HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCHHHHC
VTDLLCGEAAFGDTIHSDRLSDAHLIPQGQSDVRRAMRGVDRLSLLLDALAAAYDLVVVE
HHHHHHCCHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
CGSADVAGVSRLTRSRDVEIILSLPEIEETIFVTLMTDFQAAGYERVVLMSGGEGAEQTL
CCCCCHHHHHHHHHCCCCEEEEECCCCCHHEEEEEEHHHHCCCCCEEEEEECCCCHHHHH
GKAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8226645; 8226646; 8246891; 11481431 [H]