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The map label for this gene is yajR [C]

Identifier: 209548777

GI number: 209548777

Start: 1184693

End: 1185922

Strand: Reverse

Name: yajR [C]

Synonym: Rleg2_1174

Alternate gene names: 209548777

Gene position: 1185922-1184693 (Counterclockwise)

Preceding gene: 209548778

Following gene: 209548776

Centisome position: 26.13

GC content: 61.06

Gene sequence:

>1230_bases
ATGGCCAATCAGGAGGGAACAGCTGCAGCAGTCATGCCGGCGACATACCGCCGTATTCCGGCCGGCATTTGGGCGCTCGG
TTTCGTCTCGATGCTGATGGACATCTCTTCCGAGATGATCCATGCGCTCCTCCCGGTTTACATGGTCTCGGTGCTTGGCA
TCTCCATGTTCGCGGTCGGCGTCATCGAAGGCATTGCCGAGGCAACGGCATCGATAACCAAGGTATTCTCGGGGGCTTTG
AGCGACTGGCTCGGTAGACGCAAGTTTCTCGCAGCACTAGGTTATGGCCTTGCCGCGGTCACCAAGCCGATCTTTCCACT
CGCCTCTTCTCTCGACTGGCTTATTGCGGCACGATTTGTCGACCGCGTCGGCAAAGGGATCCGCGGTGCGCCGCGGGATG
CACTTGTTGCTGACATCGCTCCTCCTGAACTGCGCGGAGCGAGCTTCGGACTGCGCCAGTCGCTCGACACTGTGGGCGCC
TTTGTCGGCCCCCTCCTGGCGATCGGTCTGATGTGGCTGACAGCGGATCATTTCCAAAGGGTGTTGTGGATTGCGGTCCT
TCCCGCCTTCCTGTCTGTCGGTGTGCTGCTGTTCGTCGTCAAGGAGCCCGAGCGACCGCGGGAGTTTCGCCACGTGCGCA
TGCCGCTCCACAGGGATGAACTGGGCCGTCTCGGTAGATCCTATTGGTGGGTCGTGGCGGTCGCCGCAGCATTTACGCTA
GCCCGTTTCAGCGACGCGTTCCTCATCCTGAAGGCACAGTCGATCGGCCTGCCGATAGCCTTGGTGCCGCTTGCGCTGGT
CCTTATGAGTCTAGCTTATTCGCTCTCGGCTTATCCCGCCGGCATGCTCTCAGACAAAATGGATCGGTTCACCATTCTTG
CTATCGGTCTCGTGTTGCTTGTCTGCGCCGATCTTACCCTGGCGTTCGCACAGAGTGTCATCGGCGCCGGACTCGGTGTC
CTCCTCTGGGGTCTGCACATGGGGTTCACGCAGGGGCTGCTGACGAAGGTGATTGCCGATACATCGCCTGCTGAACTGCG
TGGCACAGCCTTCGGCATGTTCAATCTGATCACCGGGCTGGCTCTGCTGCTTGCCAGTGTCATCGCGGGCACGCTTTGGG
ACCTCGCCGGGCCGCGAGGAACCTTCCTCGCCGGCGCCGGGTTCGCAATGCTGACTATGATCGGGCTGCTCGTCGTCCGC
ACGCGACTCTCTACACAGGCCGGTGCCTGA

Upstream 100 bases:

>100_bases
CCGCTCCGCGAAGAAGCCGAAGCACGCCTGCGCGTCTGCGAAGAAATCCTCGACAGCTATGCCCAACGGGTTTTCGACGC
CCACGACGAGAACCGATGAG

Downstream 100 bases:

>100_bases
CATCGGACACCAGCACAGAATGGATCGAGCTGATCTGAGAGCAAGGATTGCAAATGTACGAACTAGATGCCTTCCTCACA
CATGCCATCAACAGCCTTGC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MANQEGTAAAVMPATYRRIPAGIWALGFVSMLMDISSEMIHALLPVYMVSVLGISMFAVGVIEGIAEATASITKVFSGAL
SDWLGRRKFLAALGYGLAAVTKPIFPLASSLDWLIAARFVDRVGKGIRGAPRDALVADIAPPELRGASFGLRQSLDTVGA
FVGPLLAIGLMWLTADHFQRVLWIAVLPAFLSVGVLLFVVKEPERPREFRHVRMPLHRDELGRLGRSYWWVVAVAAAFTL
ARFSDAFLILKAQSIGLPIALVPLALVLMSLAYSLSAYPAGMLSDKMDRFTILAIGLVLLVCADLTLAFAQSVIGAGLGV
LLWGLHMGFTQGLLTKVIADTSPAELRGTAFGMFNLITGLALLLASVIAGTLWDLAGPRGTFLAGAGFAMLTMIGLLVVR
TRLSTQAGA

Sequences:

>Translated_409_residues
MANQEGTAAAVMPATYRRIPAGIWALGFVSMLMDISSEMIHALLPVYMVSVLGISMFAVGVIEGIAEATASITKVFSGAL
SDWLGRRKFLAALGYGLAAVTKPIFPLASSLDWLIAARFVDRVGKGIRGAPRDALVADIAPPELRGASFGLRQSLDTVGA
FVGPLLAIGLMWLTADHFQRVLWIAVLPAFLSVGVLLFVVKEPERPREFRHVRMPLHRDELGRLGRSYWWVVAVAAAFTL
ARFSDAFLILKAQSIGLPIALVPLALVLMSLAYSLSAYPAGMLSDKMDRFTILAIGLVLLVCADLTLAFAQSVIGAGLGV
LLWGLHMGFTQGLLTKVIADTSPAELRGTAFGMFNLITGLALLLASVIAGTLWDLAGPRGTFLAGAGFAMLTMIGLLVVR
TRLSTQAGA
>Mature_408_residues
ANQEGTAAAVMPATYRRIPAGIWALGFVSMLMDISSEMIHALLPVYMVSVLGISMFAVGVIEGIAEATASITKVFSGALS
DWLGRRKFLAALGYGLAAVTKPIFPLASSLDWLIAARFVDRVGKGIRGAPRDALVADIAPPELRGASFGLRQSLDTVGAF
VGPLLAIGLMWLTADHFQRVLWIAVLPAFLSVGVLLFVVKEPERPREFRHVRMPLHRDELGRLGRSYWWVVAVAAAFTLA
RFSDAFLILKAQSIGLPIALVPLALVLMSLAYSLSAYPAGMLSDKMDRFTILAIGLVLLVCADLTLAFAQSVIGAGLGVL
LWGLHMGFTQGLLTKVIADTSPAELRGTAFGMFNLITGLALLLASVIAGTLWDLAGPRGTFLAGAGFAMLTMIGLLVVRT
RLSTQAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43493; Mature: 43362

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ANQEGTAAAVMPATYRRIPAGIWALGFVSMLMDISSEMIHALLPVYMVSVLGISMFAVG
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEGIAEATASITKVFSGALSDWLGRRKFLAALGYGLAAVTKPIFPLASSLDWLIAARFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRVGKGIRGAPRDALVADIAPPELRGASFGLRQSLDTVGAFVGPLLAIGLMWLTADHFQR
HHHCCCCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLWIAVLPAFLSVGVLLFVVKEPERPREFRHVRMPLHRDELGRLGRSYWWVVAVAAAFTL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ARFSDAFLILKAQSIGLPIALVPLALVLMSLAYSLSAYPAGMLSDKMDRFTILAIGLVLL
HHHCCHHEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VCADLTLAFAQSVIGAGLGVLLWGLHMGFTQGLLTKVIADTSPAELRGTAFGMFNLITGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ALLLASVIAGTLWDLAGPRGTFLAGAGFAMLTMIGLLVVRTRLSTQAGA
HHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]