| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yheS [H]
Identifier: 209548678
GI number: 209548678
Start: 1095483
End: 1097366
Strand: Reverse
Name: yheS [H]
Synonym: Rleg2_1075
Alternate gene names: 209548678
Gene position: 1097366-1095483 (Counterclockwise)
Preceding gene: 209548679
Following gene: 209548677
Centisome position: 24.18
GC content: 62.85
Gene sequence:
>1884_bases ATGATCACGCTCACCGATATTTCCGCCCGCATTGCCGGGCGCCTGCTTCTCGACAATGCCAGCATTTCGCTGCCTTCGGG CACGAAGGCGGGGCTGGTCGGGCGCAACGGCGCCGGCAAGTCGACCCTGTTTCGCGTCATCACCGGCGATCTCGGCTCGG AGACCGGATCGGTGTCGATCCCGAAGGCGGCGCGCATCGGCCAGGTGGCGCAGGAAGCGCCGGCGACTGAGGAATCCCTG ATCGAGATCGTGCTGTCAGCAGACAAGGAACGCGCCGCCCTCGTTGCCGAGGCGGAAACGGCGACCGATCCGCACCGCAT CGCCGAAATCCAGATGCGTCTCGTCGATATCGACGCGCATTCGGCCGAAGCGCGCGCGGCAAGCATTCTGGCCGGCCTCG GCTTCGACCAGGCAGCGCAGGCCCGCCCCGCCTCCTCCTTCTCAGGCGGTTGGCGCATGCGCGTGGCACTGGCCGCCGTG CTGTTTTCCGAGCCGGATCTGCTGCTGCTCGACGAACCCACAAACTATCTCGACCTCGAAGGCACGCTGTGGCTGGAAGA TTATGTCCGGCGCTATCCGCACACGGTCATCATCATCAGCCACGATCGCGACCTCTTGAACAACGCGGTCAACGCGATCG TCCATCTCGACCAGAAGAAGCTGACCTTCTATCGCGGCGGCTACGACCAGTTCGAGCGGCAGAAGGCGGAAGCCGACGAG CTGCAGACCAAGGCCAAGGCCAAGAACGACGCGGCCCGCAAACATCTGCAGAGCTTCATCGATCGCTTCAAGGCCAAGGC TTCCAAGGCCCGGCAGGCGCAATCGCGCGTCAAGGCGCTCGAGCGCATGGGAACCGTCGCCGCGGTGATCGAAGACCACG TGCAGCCGATCACTTTCCCCGAGCCGGAAAAGCAGCCGGCCTCGCCGATCGTCGCGATCCAGAGCGGCGCCGTCGGTTAC GAGCCCGGCAATCCGATCCTGAAGAACCTCAACCTGCGGATCGACAATGACGACCGCATCGCCCTGCTCGGCTCGAACGG CAACGGCAAATCGACCTTCGCCAAATTCATCTCCGGCCGGCTTGCGCCGGAAAGCGGCGAAGTCAAGCTGGCGCCGAGCC TGAAGATCGGCTTCTTCGCGCAGCATCAGCTCGACGACCTCATTCCCGAGCAATCGCCGGTCGAACATGTGCGCCGGCTG ATGCCCGGCGCGCCGGAGCCCAAGGTGCGCGCTCGCGTCGCCCAGATGGGGCTTGCGACCGAGAAGATGGCGACAGCCGC CAAGGATCTTTCCGGCGGCGAAAAGGCCCGCTTGTTGATGGGGCTTGCCGCCTTCAATGCGCCCAATCTGCTGATCCTCG ACGAACCCACAAACCACCTCGATATCGATAGCCGCCGGGCGCTGATCGAGGCGCTGAACGATTACGAAGGCGCCGTCATC CTGATCTCGCACGACCGACATCTGATCGAGGCGACGGTCGATCGGCTGTGGCTGGTCAATGGCGGCACGGTGACGACCTT CGAAGGCGATATGGACGAATATCGCGACCTGATCGTCACATCCGGTAAAAAAAAAGAAGAAAAGCCGCAGCTGACTGAAG ACGCGACATCGAAGGCCGACCAGCGCAAGCTCAATGCCGAACGGCGCGCCTCGCTGACCCCGCTCAAGAAAAAGATCAAC GAAATCGAATCCTTGACGGCGAAGCTGGAGAAACAGATTCAGGCGCTTGACGCAGAACTTGCAAATCCCGCCCTTTACGA AAAGACGCCGGCCAAGGCCGCCGAGAAGGCAAAGCAGCGCGGCGAGGCTGCAGCAAAACTGGCTGCCGCCGAGGAAGACT GGCTGATGCTTTCGGCCGAATACGAAGAAGCTATGGCGGGATAG
Upstream 100 bases:
>100_bases GGCCACTGAAGGCGCGGACAGCGCTCTTACGGCGACAAGCAGGCTTGTCGCGGGACGAGCGCTCTTGCCTTAGCGGGCGC TTTCGGCCAAAACGCCGGCC
Downstream 100 bases:
>100_bases CCACAGGCTTTATGGAAAGCGTGGCGAAGTGCCGCGGATCGGCACAATTCGAGCCACTATCAACCAATCGTTAACCATAA TTCGAAAGGTTGCCTCAACA
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MITLTDISARIAGRLLLDNASISLPSGTKAGLVGRNGAGKSTLFRVITGDLGSETGSVSIPKAARIGQVAQEAPATEESL IEIVLSADKERAALVAEAETATDPHRIAEIQMRLVDIDAHSAEARAASILAGLGFDQAAQARPASSFSGGWRMRVALAAV LFSEPDLLLLDEPTNYLDLEGTLWLEDYVRRYPHTVIIISHDRDLLNNAVNAIVHLDQKKLTFYRGGYDQFERQKAEADE LQTKAKAKNDAARKHLQSFIDRFKAKASKARQAQSRVKALERMGTVAAVIEDHVQPITFPEPEKQPASPIVAIQSGAVGY EPGNPILKNLNLRIDNDDRIALLGSNGNGKSTFAKFISGRLAPESGEVKLAPSLKIGFFAQHQLDDLIPEQSPVEHVRRL MPGAPEPKVRARVAQMGLATEKMATAAKDLSGGEKARLLMGLAAFNAPNLLILDEPTNHLDIDSRRALIEALNDYEGAVI LISHDRHLIEATVDRLWLVNGGTVTTFEGDMDEYRDLIVTSGKKKEEKPQLTEDATSKADQRKLNAERRASLTPLKKKIN EIESLTAKLEKQIQALDAELANPALYEKTPAKAAEKAKQRGEAAAKLAAAEEDWLMLSAEYEEAMAG
Sequences:
>Translated_627_residues MITLTDISARIAGRLLLDNASISLPSGTKAGLVGRNGAGKSTLFRVITGDLGSETGSVSIPKAARIGQVAQEAPATEESL IEIVLSADKERAALVAEAETATDPHRIAEIQMRLVDIDAHSAEARAASILAGLGFDQAAQARPASSFSGGWRMRVALAAV LFSEPDLLLLDEPTNYLDLEGTLWLEDYVRRYPHTVIIISHDRDLLNNAVNAIVHLDQKKLTFYRGGYDQFERQKAEADE LQTKAKAKNDAARKHLQSFIDRFKAKASKARQAQSRVKALERMGTVAAVIEDHVQPITFPEPEKQPASPIVAIQSGAVGY EPGNPILKNLNLRIDNDDRIALLGSNGNGKSTFAKFISGRLAPESGEVKLAPSLKIGFFAQHQLDDLIPEQSPVEHVRRL MPGAPEPKVRARVAQMGLATEKMATAAKDLSGGEKARLLMGLAAFNAPNLLILDEPTNHLDIDSRRALIEALNDYEGAVI LISHDRHLIEATVDRLWLVNGGTVTTFEGDMDEYRDLIVTSGKKKEEKPQLTEDATSKADQRKLNAERRASLTPLKKKIN EIESLTAKLEKQIQALDAELANPALYEKTPAKAAEKAKQRGEAAAKLAAAEEDWLMLSAEYEEAMAG >Mature_627_residues MITLTDISARIAGRLLLDNASISLPSGTKAGLVGRNGAGKSTLFRVITGDLGSETGSVSIPKAARIGQVAQEAPATEESL IEIVLSADKERAALVAEAETATDPHRIAEIQMRLVDIDAHSAEARAASILAGLGFDQAAQARPASSFSGGWRMRVALAAV LFSEPDLLLLDEPTNYLDLEGTLWLEDYVRRYPHTVIIISHDRDLLNNAVNAIVHLDQKKLTFYRGGYDQFERQKAEADE LQTKAKAKNDAARKHLQSFIDRFKAKASKARQAQSRVKALERMGTVAAVIEDHVQPITFPEPEKQPASPIVAIQSGAVGY EPGNPILKNLNLRIDNDDRIALLGSNGNGKSTFAKFISGRLAPESGEVKLAPSLKIGFFAQHQLDDLIPEQSPVEHVRRL MPGAPEPKVRARVAQMGLATEKMATAAKDLSGGEKARLLMGLAAFNAPNLLILDEPTNHLDIDSRRALIEALNDYEGAVI LISHDRHLIEATVDRLWLVNGGTVTTFEGDMDEYRDLIVTSGKKKEEKPQLTEDATSKADQRKLNAERRASLTPLKKKIN EIESLTAKLEKQIQALDAELANPALYEKTPAKAAEKAKQRGEAAAKLAAAEEDWLMLSAEYEEAMAG
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=38.0681818181818, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI27881506, Length=542, Percent_Identity=36.7158671586716, Blast_Score=356, Evalue=4e-98, Organism=Homo sapiens, GI10947137, Length=542, Percent_Identity=36.7158671586716, Blast_Score=355, Evalue=6e-98, Organism=Homo sapiens, GI10947135, Length=537, Percent_Identity=35.9404096834264, Blast_Score=299, Evalue=6e-81, Organism=Homo sapiens, GI69354671, Length=537, Percent_Identity=35.9404096834264, Blast_Score=299, Evalue=7e-81, Organism=Homo sapiens, GI105990541, Length=247, Percent_Identity=27.9352226720648, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI21536376, Length=212, Percent_Identity=29.7169811320755, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI171184400, Length=264, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI150417984, Length=240, Percent_Identity=27.9166666666667, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI27881501, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI30795238, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1789751, Length=633, Percent_Identity=41.2322274881517, Blast_Score=484, Evalue=1e-138, Organism=Escherichia coli, GI1787041, Length=524, Percent_Identity=34.5419847328244, Blast_Score=327, Evalue=2e-90, Organism=Escherichia coli, GI1787182, Length=632, Percent_Identity=29.2721518987342, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI2367384, Length=527, Percent_Identity=29.9810246679317, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1788165, Length=180, Percent_Identity=31.6666666666667, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786319, Length=188, Percent_Identity=32.9787234042553, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=29.5, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1789891, Length=214, Percent_Identity=27.1028037383178, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786398, Length=204, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1787164, Length=189, Percent_Identity=31.2169312169312, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081709, Length=210, Percent_Identity=25.2380952380952, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=27.7272727272727, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=25.8474576271186, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1787758, Length=199, Percent_Identity=25.6281407035176, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17553372, Length=531, Percent_Identity=37.0998116760829, Blast_Score=348, Evalue=7e-96, Organism=Caenorhabditis elegans, GI17555318, Length=522, Percent_Identity=34.6743295019157, Blast_Score=332, Evalue=4e-91, Organism=Caenorhabditis elegans, GI17559834, Length=541, Percent_Identity=36.7837338262477, Blast_Score=330, Evalue=1e-90, Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=31.4159292035398, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565586, Length=189, Percent_Identity=30.6878306878307, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565938, Length=243, Percent_Identity=29.2181069958848, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533592, Length=187, Percent_Identity=32.0855614973262, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=540, Percent_Identity=37.4074074074074, Blast_Score=377, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6320874, Length=528, Percent_Identity=33.3333333333333, Blast_Score=317, Evalue=5e-87, Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=30.46875, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6323278, Length=403, Percent_Identity=26.302729528536, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324314, Length=508, Percent_Identity=25, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=39.9621212121212, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI24642252, Length=542, Percent_Identity=37.4538745387454, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI18859989, Length=542, Percent_Identity=37.4538745387454, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=36.4140480591497, Blast_Score=345, Evalue=4e-95, Organism=Drosophila melanogaster, GI28574150, Length=189, Percent_Identity=31.7460317460317, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007328, Length=189, Percent_Identity=31.7460317460317, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007184, Length=173, Percent_Identity=32.9479768786127, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI221500365, Length=173, Percent_Identity=32.9479768786127, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 68188; Mature: 68188
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLTDISARIAGRLLLDNASISLPSGTKAGLVGRNGAGKSTLFRVITGDLGSETGSVSI CEEEEECHHHHHCEEEEECCCEECCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCEEC PKAARIGQVAQEAPATEESLIEIVLSADKERAALVAEAETATDPHRIAEIQMRLVDIDAH CCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHEEEEECCCCCCCHHHHEEEEEEEEECCC SAEARAASILAGLGFDQAAQARPASSFSGGWRMRVALAAVLFSEPDLLLLDEPTNYLDLE CCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECC GTLWLEDYVRRYPHTVIIISHDRDLLNNAVNAIVHLDQKKLTFYRGGYDQFERQKAEADE CEEEHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCHHEEEEECCHHHHHHHHHHHHH LQTKAKAKNDAARKHLQSFIDRFKAKASKARQAQSRVKALERMGTVAAVIEDHVQPITFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EPEKQPASPIVAIQSGAVGYEPGNPILKNLNLRIDNDDRIALLGSNGNGKSTFAKFISGR CCCCCCCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHCC LAPESGEVKLAPSLKIGFFAQHQLDDLIPEQSPVEHVRRLMPGAPEPKVRARVAQMGLAT CCCCCCCEEECCCCEEEEEHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHH EKMATAAKDLSGGEKARLLMGLAAFNAPNLLILDEPTNHLDIDSRRALIEALNDYEGAVI HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEE LISHDRHLIEATVDRLWLVNGGTVTTFEGDMDEYRDLIVTSGKKKEEKPQLTEDATSKAD EEECCCHHHHHHHHHEEEEECCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH QRKLNAERRASLTPLKKKINEIESLTAKLEKQIQALDAELANPALYEKTPAKAAEKAKQR HHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH GEAAAKLAAAEEDWLMLSAEYEEAMAG HHHHHHHHCCCCCEEEEEECHHHHHCC >Mature Secondary Structure MITLTDISARIAGRLLLDNASISLPSGTKAGLVGRNGAGKSTLFRVITGDLGSETGSVSI CEEEEECHHHHHCEEEEECCCEECCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCEEC PKAARIGQVAQEAPATEESLIEIVLSADKERAALVAEAETATDPHRIAEIQMRLVDIDAH CCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHEEEEECCCCCCCHHHHEEEEEEEEECCC SAEARAASILAGLGFDQAAQARPASSFSGGWRMRVALAAVLFSEPDLLLLDEPTNYLDLE CCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECC GTLWLEDYVRRYPHTVIIISHDRDLLNNAVNAIVHLDQKKLTFYRGGYDQFERQKAEADE CEEEHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCHHEEEEECCHHHHHHHHHHHHH LQTKAKAKNDAARKHLQSFIDRFKAKASKARQAQSRVKALERMGTVAAVIEDHVQPITFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EPEKQPASPIVAIQSGAVGYEPGNPILKNLNLRIDNDDRIALLGSNGNGKSTFAKFISGR CCCCCCCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHCC LAPESGEVKLAPSLKIGFFAQHQLDDLIPEQSPVEHVRRLMPGAPEPKVRARVAQMGLAT CCCCCCCEEECCCCEEEEEHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHH EKMATAAKDLSGGEKARLLMGLAAFNAPNLLILDEPTNHLDIDSRRALIEALNDYEGAVI HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEE LISHDRHLIEATVDRLWLVNGGTVTTFEGDMDEYRDLIVTSGKKKEEKPQLTEDATSKAD EEECCCHHHHHHHHHEEEEECCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH QRKLNAERRASLTPLKKKINEIESLTAKLEKQIQALDAELANPALYEKTPAKAAEKAKQR HHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH GEAAAKLAAAEEDWLMLSAEYEEAMAG HHHHHHHHCCCCCEEEEEECHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]