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The map label for this gene is yicC [C]

Identifier: 209548664

GI number: 209548664

Start: 1079174

End: 1080061

Strand: Direct

Name: yicC [C]

Synonym: Rleg2_1061

Alternate gene names: 209548664

Gene position: 1079174-1080061 (Clockwise)

Preceding gene: 209548663

Following gene: 209548665

Centisome position: 23.78

GC content: 65.09

Gene sequence:

>888_bases
ATGGCTTTGCAGTCCATGACCGGTTTTGCGCGGCGCGAGGGAACGAGCGGCCGCTGGCGCTGGGCATGGGAACTGCGTTC
GGTCAACGGCAAGGGCCTCGACCTGCGGCTGCGTCTGCCACCCGGCCTCGAGCGCATGGAGGCGGATGTCCGCCGCCTTG
CCGGCGAAAGCTTCAGTCGCGGCAATCTGCAGGCATCGCTCTCCGTTACCGCCGACGAGAACCGCTTCGAGGCGGTGCTG
AACAGGGAAGCGCTTGCTGCCGTGCTTGCCATGCGCGAGCAATTGAACGGGATAATCGATCCGGCGCCGCTGAAACTCGA
TACGCTGCTTCTGGTGCGCGGCATCGTGGAATTCCGGGAAAGCGAGGACGACGAGGAGGCGCTTGCCGCTCGTGACGCTG
ATATCACCGCCGGCCTTCTGGCCGCCCTTGCCGATCTCAGGGCGATGCGGGAGCAGGAAGGGGCGGCGCTGAGCCGCATT
CTTCTCGACCATGTCACGACGATCGAAGGCCTGACGCGGACGATCGAGGCCGATCCCTCGCGCTCGCCGCAGGAGATCGC
CGCGCGGCTTGCCGGTCAGGTCGCCTTGCTGATGGACGGCATGGCCGCGCTCGACCGCGACAGGCTGCATGCCGAAGTGG
CGTTGCTGGCGACCAAGGCGGATCTGCGCGAGGAAATCGATCGTCTGAAGGCGCACGTCGCCGCGGCGCGCGATCTCCTG
GTGAAAGATGGCCCTGCCGGGCGCCGGTTGGACTTCCTTGCACAGGAATTTAACCGCGAATCGAATACCATCTGCTCGAA
GTCGAATGCCTCGGCGGTGACCGCCGCCGGCATCGAGCTGAAAGTTGTGATCGACCAGTTCCGCGAGCAGGTCCAGAATT
TGGAGTAG

Upstream 100 bases:

>100_bases
CGCCGTCGACGGCCAGCCGGAAGAGCAGCCGGCGGATGACGGCGCTGCCGTCGTGCCGCCGAAGAAAAAGAAGATCAACT
GATAGCTTCTGGAGGCTCGT

Downstream 100 bases:

>100_bases
GACATGAATCCGGCGAAATCCTCGCCCGTCCAGATCGCCCGCCGCGGTCTGATGCTTGTCATTTCGTCGCCGTCGGGCGC
CGGCAAGTCCACCATCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MALQSMTGFARREGTSGRWRWAWELRSVNGKGLDLRLRLPPGLERMEADVRRLAGESFSRGNLQASLSVTADENRFEAVL
NREALAAVLAMREQLNGIIDPAPLKLDTLLLVRGIVEFRESEDDEEALAARDADITAGLLAALADLRAMREQEGAALSRI
LLDHVTTIEGLTRTIEADPSRSPQEIAARLAGQVALLMDGMAALDRDRLHAEVALLATKADLREEIDRLKAHVAAARDLL
VKDGPAGRRLDFLAQEFNRESNTICSKSNASAVTAAGIELKVVIDQFREQVQNLE

Sequences:

>Translated_295_residues
MALQSMTGFARREGTSGRWRWAWELRSVNGKGLDLRLRLPPGLERMEADVRRLAGESFSRGNLQASLSVTADENRFEAVL
NREALAAVLAMREQLNGIIDPAPLKLDTLLLVRGIVEFRESEDDEEALAARDADITAGLLAALADLRAMREQEGAALSRI
LLDHVTTIEGLTRTIEADPSRSPQEIAARLAGQVALLMDGMAALDRDRLHAEVALLATKADLREEIDRLKAHVAAARDLL
VKDGPAGRRLDFLAQEFNRESNTICSKSNASAVTAAGIELKVVIDQFREQVQNLE
>Mature_294_residues
ALQSMTGFARREGTSGRWRWAWELRSVNGKGLDLRLRLPPGLERMEADVRRLAGESFSRGNLQASLSVTADENRFEAVLN
REALAAVLAMREQLNGIIDPAPLKLDTLLLVRGIVEFRESEDDEEALAARDADITAGLLAALADLRAMREQEGAALSRIL
LDHVTTIEGLTRTIEADPSRSPQEIAARLAGQVALLMDGMAALDRDRLHAEVALLATKADLREEIDRLKAHVAAARDLLV
KDGPAGRRLDFLAQEFNRESNTICSKSNASAVTAAGIELKVVIDQFREQVQNLE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=296, Percent_Identity=35.8108108108108, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32381; Mature: 32250

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQSMTGFARREGTSGRWRWAWELRSVNGKGLDLRLRLPPGLERMEADVRRLAGESFSR
CCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCC
GNLQASLSVTADENRFEAVLNREALAAVLAMREQLNGIIDPAPLKLDTLLLVRGIVEFRE
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
SEDDEEALAARDADITAGLLAALADLRAMREQEGAALSRILLDHVTTIEGLTRTIEADPS
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RSPQEIAARLAGQVALLMDGMAALDRDRLHAEVALLATKADLREEIDRLKAHVAAARDLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDGPAGRRLDFLAQEFNRESNTICSKSNASAVTAAGIELKVVIDQFREQVQNLE
HCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALQSMTGFARREGTSGRWRWAWELRSVNGKGLDLRLRLPPGLERMEADVRRLAGESFSR
CCCHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCC
GNLQASLSVTADENRFEAVLNREALAAVLAMREQLNGIIDPAPLKLDTLLLVRGIVEFRE
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
SEDDEEALAARDADITAGLLAALADLRAMREQEGAALSRILLDHVTTIEGLTRTIEADPS
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RSPQEIAARLAGQVALLMDGMAALDRDRLHAEVALLATKADLREEIDRLKAHVAAARDLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDGPAGRRLDFLAQEFNRESNTICSKSNASAVTAAGIELKVVIDQFREQVQNLE
HCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]