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The map label for this gene is 209548627

Identifier: 209548627

GI number: 209548627

Start: 1043065

End: 1045107

Strand: Reverse

Name: 209548627

Synonym: Rleg2_1024

Alternate gene names: NA

Gene position: 1045107-1043065 (Counterclockwise)

Preceding gene: 209548629

Following gene: 209548626

Centisome position: 23.03

GC content: 66.37

Gene sequence:

>2043_bases
ATGATGAAGAACCGTGCCGGCTTGCTGGCCCTTGCAGTGCTCGTAATCGCAATCCTACTGATGGTATTTTTCGTCATGCC
GCGCATCGGCGGCGATGCAGCCAAGGTCGGCGACGCCATCAACCAGGCGAGCACGGAGCTCAAGGACACGGTTAACGAGT
CGGCAAAGACATCGCGCTCGGCCGTGGCCGACGCGGCCGGCGTCGCCGATAAGGTGGGTCGCCTGTCGGCCAATGCGAGC
GTGTCGCTTACCGAACTCAAGGCACTGTTTGCCGACGGCAAAGGCCCCGCCGACGACGTCTTCGCCGCTGCCAAGACCAA
GGCCGTCGATGCGCTGACTGCGCTTGCCGGTTTCGCAATCCCCGAGGGCCTCGATCCGGCGACCCAGGCACTTGCCGTCA
AGGCGAAGGACGGCGGCACGAAGGCGCTCGCCATCGTCCAGTCGCTGCCGGAGAACATTACCGACGCACTTGCCGCGATC
GCCAAGGCCGAGGCTGCACTGACCGGTGCGCCTGAGCCTGCGGCGAGCACGACAGCGGCGAATGCCGGCCCGAAGCTTCC
CGCCTTCGACGTCCTGCGCGTCGAGCCCGACGGCTCGACAGTGATTGCCGGCTCCGCAGAACCGAACGGCAAGCTCGAAG
TGCTTGACGGCGAAAAGGTCGTGACGACAGCCAATGTCGATGCCAGCGGCGATTTCGCCGCCGTTCTCGACGATCCGCTT
GCGGCGGGCGACCACCAGCTCGTGCTCAAGTTTACCGGCAAGGACGGCAAGAGCACGCTTTCCGAAGAAGTCGCGACCAT
CTCCGTGCCGAAGGACGGCGACGGCGCCAATCTGCTCGCCATGGTCTCCAAACCCGGCGCGGCGAGCCGCATCATCACCG
CGCCGAAGGCCGGCACCGAAGTCGCCGATGCCTCCAACCCGATGGCGCCGCCAACAGACAAGCCGGCAACGGGCGAAGGT
TCGGCTGCGCCTGCTGCGACCGTTGCGCCAACCGGCGAGCTGGCGCTGCAGACGCCTAACCTCACCGACGCCGCCTCCGG
CGGCTCAGCGGCGGCCCCGGCCATTCCCGGCACCGCCAACCCCGACAAGTCGAATGCGCCCGATGTGATGGTCAACGCCG
TCGAAATCGAGGGCAACAAGATTTTCATTGCCGGCACGGCGCGCGCCAACGCCAAGGTCCTCGGTTACGCCGACGACAGC
CTTGTCGGCCAGGACACCGCCGGTTCGGATGGCCATTTCGTCATCGACGGCGTGGTGGCGCTCTCGGTCGGCGACCATAA
GATCCGCGTCGATGTCGTCGATCCCGCCGGCAAGGTGATCGTGCGTGCAGCGGTGAATTTCAATCGCCCGGCCGGCGACC
AGGTCAGGGTCGCGGCGCAATCCGTCCCAGCCGACGCAAATGGCGCCTCCTCGATGGTGCCGCTCGACGAAGGCGAGCTC
GGCAAGCGCAAGGCCGAAGTCGGCAAGGCCTTCGGCCTGCTGAAGGGGCTGTTTGCCGATGGCAAGTTGCCCGGCGCCGA
ACAGCTTGCGGCGGCGCGCTCGGCAACCGAATTCGCCTTGCGCTCGGTCGCCGATTTCCGGCCGGGATCCGATGCGCCCG
ACACCTTCAAGCAAGCCTCCGGCGCCGCCTCGCAGACAGCGACCAGCGCATTGAAGATGCTGCAGGGCCTGCCGAAAGAT
GCAAAATCCGTCGGCGCTGGCCTCGACGGCCTGGGGGCGATCATCGCCGGCCTCTCCACGTCCCCCGCACCGGCGGCGCC
GGCTGCAAACGACGCGGCAGGCAACCAGCCGAAGACGATCGAACAGGCGCCGCTGACCGCAAACAACGCGGCGGTGATCA
TCCGCCGCGGCGACACGCTGTGGCAGATCTCGCGCCGCACCTATGGACTCGGCGTTCGTTACACGACGATCTACATCGCC
AACGAGGACAAGATCGTCGATCCGGATCGCATCCGCCCCGGCCAGATCTTCGGCCTGCCGAAGGATGTACTGCCGAACGC
CGAGGAACTGCACCGCAAACGCCTGTCCAATCGGCATCTGTAA

Upstream 100 bases:

>100_bases
GCCTGCCGAGCTTGCCGAATTGCTTTGAATGCTTGTGCAAAGCAACGGGAATCGCTAGCAATTTCGGTTACTACGGCAAA
TTGCCGCCTGGGGAGACATA

Downstream 100 bases:

>100_bases
GCGCCAAAACATGATAACGAGGCCGGGCGGGATAACCGCCCGGCCTCTCTTTTCCTGAACCCCGCAATTGTTGTATTCAT
CTGCCCGGCATCCTATCTGG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MMKNRAGLLALAVLVIAILLMVFFVMPRIGGDAAKVGDAINQASTELKDTVNESAKTSRSAVADAAGVADKVGRLSANAS
VSLTELKALFADGKGPADDVFAAAKTKAVDALTALAGFAIPEGLDPATQALAVKAKDGGTKALAIVQSLPENITDALAAI
AKAEAALTGAPEPAASTTAANAGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDDPL
AAGDHQLVLKFTGKDGKSTLSEEVATISVPKDGDGANLLAMVSKPGAASRIITAPKAGTEVADASNPMAPPTDKPATGEG
SAAPAATVAPTGELALQTPNLTDAASGGSAAAPAIPGTANPDKSNAPDVMVNAVEIEGNKIFIAGTARANAKVLGYADDS
LVGQDTAGSDGHFVIDGVVALSVGDHKIRVDVVDPAGKVIVRAAVNFNRPAGDQVRVAAQSVPADANGASSMVPLDEGEL
GKRKAEVGKAFGLLKGLFADGKLPGAEQLAAARSATEFALRSVADFRPGSDAPDTFKQASGAASQTATSALKMLQGLPKD
AKSVGAGLDGLGAIIAGLSTSPAPAAPAANDAAGNQPKTIEQAPLTANNAAVIIRRGDTLWQISRRTYGLGVRYTTIYIA
NEDKIVDPDRIRPGQIFGLPKDVLPNAEELHRKRLSNRHL

Sequences:

>Translated_680_residues
MMKNRAGLLALAVLVIAILLMVFFVMPRIGGDAAKVGDAINQASTELKDTVNESAKTSRSAVADAAGVADKVGRLSANAS
VSLTELKALFADGKGPADDVFAAAKTKAVDALTALAGFAIPEGLDPATQALAVKAKDGGTKALAIVQSLPENITDALAAI
AKAEAALTGAPEPAASTTAANAGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDDPL
AAGDHQLVLKFTGKDGKSTLSEEVATISVPKDGDGANLLAMVSKPGAASRIITAPKAGTEVADASNPMAPPTDKPATGEG
SAAPAATVAPTGELALQTPNLTDAASGGSAAAPAIPGTANPDKSNAPDVMVNAVEIEGNKIFIAGTARANAKVLGYADDS
LVGQDTAGSDGHFVIDGVVALSVGDHKIRVDVVDPAGKVIVRAAVNFNRPAGDQVRVAAQSVPADANGASSMVPLDEGEL
GKRKAEVGKAFGLLKGLFADGKLPGAEQLAAARSATEFALRSVADFRPGSDAPDTFKQASGAASQTATSALKMLQGLPKD
AKSVGAGLDGLGAIIAGLSTSPAPAAPAANDAAGNQPKTIEQAPLTANNAAVIIRRGDTLWQISRRTYGLGVRYTTIYIA
NEDKIVDPDRIRPGQIFGLPKDVLPNAEELHRKRLSNRHL
>Mature_680_residues
MMKNRAGLLALAVLVIAILLMVFFVMPRIGGDAAKVGDAINQASTELKDTVNESAKTSRSAVADAAGVADKVGRLSANAS
VSLTELKALFADGKGPADDVFAAAKTKAVDALTALAGFAIPEGLDPATQALAVKAKDGGTKALAIVQSLPENITDALAAI
AKAEAALTGAPEPAASTTAANAGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDDPL
AAGDHQLVLKFTGKDGKSTLSEEVATISVPKDGDGANLLAMVSKPGAASRIITAPKAGTEVADASNPMAPPTDKPATGEG
SAAPAATVAPTGELALQTPNLTDAASGGSAAAPAIPGTANPDKSNAPDVMVNAVEIEGNKIFIAGTARANAKVLGYADDS
LVGQDTAGSDGHFVIDGVVALSVGDHKIRVDVVDPAGKVIVRAAVNFNRPAGDQVRVAAQSVPADANGASSMVPLDEGEL
GKRKAEVGKAFGLLKGLFADGKLPGAEQLAAARSATEFALRSVADFRPGSDAPDTFKQASGAASQTATSALKMLQGLPKD
AKSVGAGLDGLGAIIAGLSTSPAPAAPAANDAAGNQPKTIEQAPLTANNAAVIIRRGDTLWQISRRTYGLGVRYTTIYIA
NEDKIVDPDRIRPGQIFGLPKDVLPNAEELHRKRLSNRHL

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68577; Mature: 68577

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNRAGLLALAVLVIAILLMVFFVMPRIGGDAAKVGDAINQASTELKDTVNESAKTSRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVADAAGVADKVGRLSANASVSLTELKALFADGKGPADDVFAAAKTKAVDALTALAGFAI
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PEGLDPATQALAVKAKDGGTKALAIVQSLPENITDALAAIAKAEAALTGAPEPAASTTAA
CCCCCHHHHEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NAGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDDPL
CCCCCCCCEEEEEECCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCCCCEEEEECCCC
AAGDHQLVLKFTGKDGKSTLSEEVATISVPKDGDGANLLAMVSKPGAASRIITAPKAGTE
CCCCCEEEEEEECCCCHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCC
VADASNPMAPPTDKPATGEGSAAPAATVAPTGELALQTPNLTDAASGGSAAAPAIPGTAN
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
PDKSNAPDVMVNAVEIEGNKIFIAGTARANAKVLGYADDSLVGQDTAGSDGHFVIDGVVA
CCCCCCCCEEEEEEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
LSVGDHKIRVDVVDPAGKVIVRAAVNFNRPAGDQVRVAAQSVPADANGASSMVPLDEGEL
EEECCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCC
GKRKAEVGKAFGLLKGLFADGKLPGAEQLAAARSATEFALRSVADFRPGSDAPDTFKQAS
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
GAASQTATSALKMLQGLPKDAKSVGAGLDGLGAIIAGLSTSPAPAAPAANDAAGNQPKTI
CCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
EQAPLTANNAAVIIRRGDTLWQISRRTYGLGVRYTTIYIANEDKIVDPDRIRPGQIFGLP
CCCCCCCCCCEEEEECCCCEEEECCHHEECCEEEEEEEEECCCCCCCCCCCCCCEEECCC
KDVLPNAEELHRKRLSNRHL
HHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKNRAGLLALAVLVIAILLMVFFVMPRIGGDAAKVGDAINQASTELKDTVNESAKTSRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVADAAGVADKVGRLSANASVSLTELKALFADGKGPADDVFAAAKTKAVDALTALAGFAI
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PEGLDPATQALAVKAKDGGTKALAIVQSLPENITDALAAIAKAEAALTGAPEPAASTTAA
CCCCCHHHHEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NAGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDDPL
CCCCCCCCEEEEEECCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCCCCEEEEECCCC
AAGDHQLVLKFTGKDGKSTLSEEVATISVPKDGDGANLLAMVSKPGAASRIITAPKAGTE
CCCCCEEEEEEECCCCHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCCCC
VADASNPMAPPTDKPATGEGSAAPAATVAPTGELALQTPNLTDAASGGSAAAPAIPGTAN
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
PDKSNAPDVMVNAVEIEGNKIFIAGTARANAKVLGYADDSLVGQDTAGSDGHFVIDGVVA
CCCCCCCCEEEEEEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
LSVGDHKIRVDVVDPAGKVIVRAAVNFNRPAGDQVRVAAQSVPADANGASSMVPLDEGEL
EEECCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCC
GKRKAEVGKAFGLLKGLFADGKLPGAEQLAAARSATEFALRSVADFRPGSDAPDTFKQAS
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
GAASQTATSALKMLQGLPKDAKSVGAGLDGLGAIIAGLSTSPAPAAPAANDAAGNQPKTI
CCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
EQAPLTANNAAVIIRRGDTLWQISRRTYGLGVRYTTIYIANEDKIVDPDRIRPGQIFGLP
CCCCCCCCCCEEEEECCCCEEEECCHHEECCEEEEEEEEECCCCCCCCCCCCCCEEECCC
KDVLPNAEELHRKRLSNRHL
HHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA