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The map label for this gene is ycbX [H]

Identifier: 209548608

GI number: 209548608

Start: 1027113

End: 1027970

Strand: Reverse

Name: ycbX [H]

Synonym: Rleg2_1005

Alternate gene names: 209548608

Gene position: 1027970-1027113 (Counterclockwise)

Preceding gene: 209548609

Following gene: 209548594

Centisome position: 22.65

GC content: 65.5

Gene sequence:

>858_bases
ATGCACATCAGCGACCTCTTCATCTACCCGCTCAAGAGCGCCCGCGGCATTGCCCTGCCTTCGGCCGATATCGATGCCTA
TGGGCTTCCCGGCGACCGGCGGGCGATGATCACCGACCCACACGGGCACTTCATCACCCAGCGCGAATTGCCGGACCTGG
CGCGCATCGAGATCCGGCCGGAGCCCGGCGCCTTCCGGCTGCTGATGCAAGGTAAGCAGGACATATCCGTGCCACCGCCC
CGGCCTGAAATCCGCATGGATGTGAGCGTGTGGAAATCGACCGTCAGCGCCGCCGTCGCCGATCCCGAGAGCAACCGGCA
GCTTTCCGAATGGCTCGGCCGCGAGGTGCAACTGGTCTTCTTCGACGGCCAGGCACGGCGCACAGCGAATGCCGAATGGG
CCGGCGAAGGCACGCCGGTCACCTTTACCGACGGCTACCAGATCCTGGTGACGACAACCGGTTCGCTGAAGGCTTTGAAT
GCCGATCTCGCCGCCAATGGCGAAGGCAGCGTCGGCATGGAACGTTTCCGTCCGAACATCGTCATCGATATCGACGAGGC
CTGGCCGGAGGACCGCTGGGCGGCGATCGAGATTGCCGGCATCCGCTTCGATCTCGTCAAACCCTGCTCGCGCTGCATCA
TGACGACGCAGGACCAACTGACCGGTTCACGCGAGGTACCCAACCCGATGCCGGCAATGGGCCGCATCCGCATGTCGGCC
GACCGGCGTGTGCCCGGCCCGCTCTTCGGCTGGAACGTCACGCCGCGCGGCGGCGGCAGGATCACGATCGGTGACACCGT
GCGCGTCGTCGAAGAAAGGCCTGAGGGCTGGGCGTTGAAGGTTCGTGCGCGAGGGTAG

Upstream 100 bases:

>100_bases
TAGCTTCTTGTTTTTGCGCATGTCGTTGCGGCAAAAGCGCTTCGCGCTTTGCCTGGGAAAACTGCTTCACACTTTTGCGC
GACATGCTTAGGAGAACCGT

Downstream 100 bases:

>100_bases
GTCACATCTGACGGGGCCTTCTACCGCATACCTCACAACATTCTCCCTCATTCCTGTGCTCGTCACAGGAATCCAGCGCG
CCCAAGTCCTTGGGCGCGGA

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MHISDLFIYPLKSARGIALPSADIDAYGLPGDRRAMITDPHGHFITQRELPDLARIEIRPEPGAFRLLMQGKQDISVPPP
RPEIRMDVSVWKSTVSAAVADPESNRQLSEWLGREVQLVFFDGQARRTANAEWAGEGTPVTFTDGYQILVTTTGSLKALN
ADLAANGEGSVGMERFRPNIVIDIDEAWPEDRWAAIEIAGIRFDLVKPCSRCIMTTQDQLTGSREVPNPMPAMGRIRMSA
DRRVPGPLFGWNVTPRGGGRITIGDTVRVVEERPEGWALKVRARG

Sequences:

>Translated_285_residues
MHISDLFIYPLKSARGIALPSADIDAYGLPGDRRAMITDPHGHFITQRELPDLARIEIRPEPGAFRLLMQGKQDISVPPP
RPEIRMDVSVWKSTVSAAVADPESNRQLSEWLGREVQLVFFDGQARRTANAEWAGEGTPVTFTDGYQILVTTTGSLKALN
ADLAANGEGSVGMERFRPNIVIDIDEAWPEDRWAAIEIAGIRFDLVKPCSRCIMTTQDQLTGSREVPNPMPAMGRIRMSA
DRRVPGPLFGWNVTPRGGGRITIGDTVRVVEERPEGWALKVRARG
>Mature_285_residues
MHISDLFIYPLKSARGIALPSADIDAYGLPGDRRAMITDPHGHFITQRELPDLARIEIRPEPGAFRLLMQGKQDISVPPP
RPEIRMDVSVWKSTVSAAVADPESNRQLSEWLGREVQLVFFDGQARRTANAEWAGEGTPVTFTDGYQILVTTTGSLKALN
ADLAANGEGSVGMERFRPNIVIDIDEAWPEDRWAAIEIAGIRFDLVKPCSRCIMTTQDQLTGSREVPNPMPAMGRIRMSA
DRRVPGPLFGWNVTPRGGGRITIGDTVRVVEERPEGWALKVRARG

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=285, Percent_Identity=27.0175438596491, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI31542713, Length=279, Percent_Identity=26.8817204301075, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI157388923, Length=244, Percent_Identity=27.0491803278689, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1787179, Length=272, Percent_Identity=36.0294117647059, Blast_Score=147, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI17540702, Length=288, Percent_Identity=25, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71990971, Length=299, Percent_Identity=27.4247491638796, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17561286, Length=302, Percent_Identity=26.8211920529801, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI17647607, Length=238, Percent_Identity=27.7310924369748, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 31507; Mature: 31507

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISDLFIYPLKSARGIALPSADIDAYGLPGDRRAMITDPHGHFITQRELPDLARIEIRP
CCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEEEC
EPGAFRLLMQGKQDISVPPPRPEIRMDVSVWKSTVSAAVADPESNRQLSEWLGREVQLVF
CCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHEECCCCCCCHHHHHCCCEEEEEE
FDGQARRTANAEWAGEGTPVTFTDGYQILVTTTGSLKALNADLAANGEGSVGMERFRPNI
ECCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEECCCEECCCCCCCCHHHHCCCE
VIDIDEAWPEDRWAAIEIAGIRFDLVKPCSRCIMTTQDQLTGSREVPNPMPAMGRIRMSA
EEEECCCCCCCCEEEEEEEEEEEEHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEECC
DRRVPGPLFGWNVTPRGGGRITIGDTVRVVEERPEGWALKVRARG
CCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MHISDLFIYPLKSARGIALPSADIDAYGLPGDRRAMITDPHGHFITQRELPDLARIEIRP
CCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEEEEEC
EPGAFRLLMQGKQDISVPPPRPEIRMDVSVWKSTVSAAVADPESNRQLSEWLGREVQLVF
CCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHEECCCCCCCHHHHHCCCEEEEEE
FDGQARRTANAEWAGEGTPVTFTDGYQILVTTTGSLKALNADLAANGEGSVGMERFRPNI
ECCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEECCCEECCCCCCCCHHHHCCCE
VIDIDEAWPEDRWAAIEIAGIRFDLVKPCSRCIMTTQDQLTGSREVPNPMPAMGRIRMSA
EEEECCCCCCCCEEEEEEEEEEEEHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEECC
DRRVPGPLFGWNVTPRGGGRITIGDTVRVVEERPEGWALKVRARG
CCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]