| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is bioH [C]
Identifier: 209548590
GI number: 209548590
Start: 1009763
End: 1010659
Strand: Reverse
Name: bioH [C]
Synonym: Rleg2_0987
Alternate gene names: 209548590
Gene position: 1010659-1009763 (Counterclockwise)
Preceding gene: 209548591
Following gene: 209548586
Centisome position: 22.27
GC content: 62.32
Gene sequence:
>897_bases ATGCCGGATACGGATGCAGGCGGTTTCCAGGAACGATTTTACACCTCTTCCGACGGGCTGACGCTTTATGCCCGCGACTA TCAGCCGGCCGAGACGGCGACCGCAGGACGGTTGCCGGTCATCTGCCTGCCCGGACTGACCCGCAATACGCGGGATTTTC ACCCGCTTGCGCTGCTTCTCTCCCGGGACATCACAGCACCGCGCCGGGTCATCGCGCTCGATTCGCGCGGACGGGGAAAC TCGGCGTGGGATGAGAACAAGGCGAACTACAATCTCGCTATAGAGGCCGGCGACGTCGTCACCGCCTGCGCGACCCTCGG CGTCGAGCGGGCGATCTTCATCGGCACGTCGCGAGGCGGGCTGATCCTGCATCTGATTGCAACGACACGGCCGGATCTTC TCGAAGCTGTCATCCTCAACGATATCGGGCCCGTGGTCGAGGCCGAGGGGCTGGCGCGGATCCGCGATTATCTCAACAGC GGCAGAAGGCCTGACGACTGGAACGCTGCGGCCGATATCGTGAAGGAAAATCATGGCGTGTCGTTTACCGCGCTTGGAGA GGAAGACTGGCGCGAGATGGCACTTGCTCTTTATCGCGACGTCGGCGGAAGACCGGTCGCCGATTTCGATCCGGCGATCG CGGAGGCACTGAAATCGGTCGATCTCAGCCAGCCGCTGCCTGATCTCTGGGCGCAATTCGACAGCCTGAGCCGGCTTCCG CTGATGCTGATCCGCGGCGAAAATACGTCTCTGCTCTCAAAGGAGACGGCCGATGAGATGGCCCGCCGGCATCCGAATTT GATCCTGCATGCTGCCGAAGGGCAAGGACATGCCCCCCTCCTGCATCACGGCGGCATCCCCACAGCCATTCGAGCTTTTC TCGCCTCCTGCCGATAA
Upstream 100 bases:
>100_bases GAGCGTGACCTCATCGGCGGACGCAGCGCCTCCTGACGCTGTTTGGCGCGGCTCGAAAAGCAGGCTACACCTTCGGGATC AACAACTCTCGAGGGATGCG
Downstream 100 bases:
>100_bases GGCGCGCCACATTAATTTGACTCAAGCGACCCGCTTTTGCGCGTTGTTTTCATGCATATCGTTACCCGGGAACCGCGGCA AACCTCCGGGCGGCATGAAT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPDTDAGGFQERFYTSSDGLTLYARDYQPAETATAGRLPVICLPGLTRNTRDFHPLALLLSRDITAPRRVIALDSRGRGN SAWDENKANYNLAIEAGDVVTACATLGVERAIFIGTSRGGLILHLIATTRPDLLEAVILNDIGPVVEAEGLARIRDYLNS GRRPDDWNAAADIVKENHGVSFTALGEEDWREMALALYRDVGGRPVADFDPAIAEALKSVDLSQPLPDLWAQFDSLSRLP LMLIRGENTSLLSKETADEMARRHPNLILHAAEGQGHAPLLHHGGIPTAIRAFLASCR
Sequences:
>Translated_298_residues MPDTDAGGFQERFYTSSDGLTLYARDYQPAETATAGRLPVICLPGLTRNTRDFHPLALLLSRDITAPRRVIALDSRGRGN SAWDENKANYNLAIEAGDVVTACATLGVERAIFIGTSRGGLILHLIATTRPDLLEAVILNDIGPVVEAEGLARIRDYLNS GRRPDDWNAAADIVKENHGVSFTALGEEDWREMALALYRDVGGRPVADFDPAIAEALKSVDLSQPLPDLWAQFDSLSRLP LMLIRGENTSLLSKETADEMARRHPNLILHAAEGQGHAPLLHHGGIPTAIRAFLASCR >Mature_297_residues PDTDAGGFQERFYTSSDGLTLYARDYQPAETATAGRLPVICLPGLTRNTRDFHPLALLLSRDITAPRRVIALDSRGRGNS AWDENKANYNLAIEAGDVVTACATLGVERAIFIGTSRGGLILHLIATTRPDLLEAVILNDIGPVVEAEGLARIRDYLNSG RRPDDWNAAADIVKENHGVSFTALGEEDWREMALALYRDVGGRPVADFDPAIAEALKSVDLSQPLPDLWAQFDSLSRLPL MLIRGENTSLLSKETADEMARRHPNLILHAAEGQGHAPLLHHGGIPTAIRAFLASCR
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32421; Mature: 32290
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTDAGGFQERFYTSSDGLTLYARDYQPAETATAGRLPVICLPGLTRNTRDFHPLALLL CCCCCCCCHHHHEEECCCCEEEEECCCCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHH SRDITAPRRVIALDSRGRGNSAWDENKANYNLAIEAGDVVTACATLGVERAIFIGTSRGG HCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCC LILHLIATTRPDLLEAVILNDIGPVVEAEGLARIRDYLNSGRRPDDWNAAADIVKENHGV EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCE SFTALGEEDWREMALALYRDVGGRPVADFDPAIAEALKSVDLSQPLPDLWAQFDSLSRLP EEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC LMLIRGENTSLLSKETADEMARRHPNLILHAAEGQGHAPLLHHGGIPTAIRAFLASCR EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHCC >Mature Secondary Structure PDTDAGGFQERFYTSSDGLTLYARDYQPAETATAGRLPVICLPGLTRNTRDFHPLALLL CCCCCCCHHHHEEECCCCEEEEECCCCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHH SRDITAPRRVIALDSRGRGNSAWDENKANYNLAIEAGDVVTACATLGVERAIFIGTSRGG HCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCCC LILHLIATTRPDLLEAVILNDIGPVVEAEGLARIRDYLNSGRRPDDWNAAADIVKENHGV EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCE SFTALGEEDWREMALALYRDVGGRPVADFDPAIAEALKSVDLSQPLPDLWAQFDSLSRLP EEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC LMLIRGENTSLLSKETADEMARRHPNLILHAAEGQGHAPLLHHGGIPTAIRAFLASCR EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA