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The map label for this gene is ropA [H]

Identifier: 209548589

GI number: 209548589

Start: 1008545

End: 1009558

Strand: Direct

Name: ropA [H]

Synonym: Rleg2_0986

Alternate gene names: 209548589

Gene position: 1008545-1009558 (Clockwise)

Preceding gene: 209548588

Following gene: 209548592

Centisome position: 22.22

GC content: 57.69

Gene sequence:

>1014_bases
ATGAACATCAAGAGCCTTCTTCTCGGCTCCGCTGCTGCTCTCGCAGTAGTTTCCGGTGCTCAAGCTGCTGACGCTATCGT
TGCTGCTGAGCCGGAACCGGTTGAATATGTTCGCGTCTGCGACGCTTACGGCACCGGCTACTTCTACATCCCGGGCACCG
AAACCTGCCTCAAGATCGAAGGCTACATCCGTTTCCAGGTCAACGTTGGCGACCAGCCAGGTGGTGACAACGATTCTGAT
TGGGATGCAGTAACTCGCGGTCAGGTTCAGTTCACGGCCAAGAGCGACACCGAGTATGGTCCGCTGACCGGCGTCATCGT
CATGCAGTTCAATGCTGACAACGCCACCGATCAGGAAGCCAAGCTCGACTCCGCTTATCTCGACATCGCCGGCTTCCGCG
CCGGTCTGTTCTACAGCTGGTGGGACGACGGCCTCTCGGGCGAAACCGACGATATCGGTTCTCCGGTTACGCTGCATAAC
TCCCTCCGCTATCAGTACGAAAGCGGCGACTTCTATGCTGGCATCAGCGTCGACGAGCTCGAAGACAGCCCGTTCTATGA
CGGCGAAGAAGCCAACAACGTTGGTGTTGCCGTTGGTCTCGGTGGCAAGGCTGGTGCCTTCAGCTACCAGATCACTGCTG
GCTACGATACCGACAACGAAGAAGGCGCCGTCCGCGCAATGGGTACCGTTGAAATCGGTCCCGGCACGCTCGGCCTCGCC
GCTGTCTACTCCACCAACCCGAACGCTTACTACAACGCTGCTGAATGGGCGATTGCTGCTGAATACGCTATCAAGGCGAC
TGACAAGCTGAAGATCACCCCTGGCGTTCAGTACTACAGCGACTACGGTGTTGTCGGCAGCGACTTCGGCGATGGCGATG
CCTGGAAGGTCGGTCTGACGGTTGATTACCAGATCGTCGACAACTTCTACGCCAAGGCTTCGGTTCAGTACCTCGATCCG
GAAGATGCTGACGACTCCACGACGGGCTACTTCCGTCTGCAGCGTTCGTTCTAA

Upstream 100 bases:

>100_bases
GCGACTGATCGTCCACTTCTTGAAACACGGGAATGGGGCAGGGAACGCTGCTCAGCGAAAGATCCCAAACCCGATCGAAA
CTTTGAATTGGAGGTCATTT

Downstream 100 bases:

>100_bases
TCTGATCTGACTTCGGTCAATCAGGAAAGCCCGGCTCGTTGAGCCGGGCTTTTTTGCATTGGCGGACCGCACCTTCTGCC
TGCTGACCGGCTTCGATGAG

Product: porin

Products: NA

Alternate protein names: OMPIIIA [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIEGYIRFQVNVGDQPGGDNDSD
WDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQEAKLDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSPVTLHN
SLRYQYESGDFYAGISVDELEDSPFYDGEEANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVEIGPGTLGLA
AVYSTNPNAYYNAAEWAIAAEYAIKATDKLKITPGVQYYSDYGVVGSDFGDGDAWKVGLTVDYQIVDNFYAKASVQYLDP
EDADDSTTGYFRLQRSF

Sequences:

>Translated_337_residues
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIEGYIRFQVNVGDQPGGDNDSD
WDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQEAKLDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSPVTLHN
SLRYQYESGDFYAGISVDELEDSPFYDGEEANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVEIGPGTLGLA
AVYSTNPNAYYNAAEWAIAAEYAIKATDKLKITPGVQYYSDYGVVGSDFGDGDAWKVGLTVDYQIVDNFYAKASVQYLDP
EDADDSTTGYFRLQRSF
>Mature_337_residues
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIEGYIRFQVNVGDQPGGDNDSD
WDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQEAKLDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSPVTLHN
SLRYQYESGDFYAGISVDELEDSPFYDGEEANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVEIGPGTLGLA
AVYSTNPNAYYNAAEWAIAAEYAIKATDKLKITPGVQYYSDYGVVGSDFGDGDAWKVGLTVDYQIVDNFYAKASVQYLDP
EDADDSTTGYFRLQRSF

Specific function: May act as an outer membrane pore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 36162; Mature: 36162

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIE
CCHHHHHHCCCEEEEEECCCCHHCEEEECCCCCCEEEEEEHHCCCCEEEECCCCEEEEEE
GYIRFQVNVGDQPGGDNDSDWDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQEA
EEEEEEEEECCCCCCCCCCCCHHEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCHH
KLDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSPVTLHNSLRYQYESGDFYAGISVDEL
HCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEECCCEEECCCHHHC
EDSPFYDGEEANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVEIGPGTLGLA
CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEE
AVYSTNPNAYYNAAEWAIAAEYAIKATDKLKITPGVQYYSDYGVVGSDFGDGDAWKVGLT
EEEECCCCCEEECHHEEEEEEEEEEECCEEEECCCCEEECCCCCEECCCCCCCEEEEEEE
VDYQIVDNFYAKASVQYLDPEDADDSTTGYFRLQRSF
EEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIE
CCHHHHHHCCCEEEEEECCCCHHCEEEECCCCCCEEEEEEHHCCCCEEEECCCCEEEEEE
GYIRFQVNVGDQPGGDNDSDWDAVTRGQVQFTAKSDTEYGPLTGVIVMQFNADNATDQEA
EEEEEEEEECCCCCCCCCCCCHHEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCHH
KLDSAYLDIAGFRAGLFYSWWDDGLSGETDDIGSPVTLHNSLRYQYESGDFYAGISVDEL
HCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEECCCEEECCCHHHC
EDSPFYDGEEANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVEIGPGTLGLA
CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEE
AVYSTNPNAYYNAAEWAIAAEYAIKATDKLKITPGVQYYSDYGVVGSDFGDGDAWKVGLT
EEEECCCCCEEECHHEEEEEEEEEEECCEEEECCCCEEECCCCCEECCCCCCCEEEEEEE
VDYQIVDNFYAKASVQYLDPEDADDSTTGYFRLQRSF
EEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1370281 [H]