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The map label for this gene is arnC [H]

Identifier: 209548558

GI number: 209548558

Start: 980141

End: 981157

Strand: Reverse

Name: arnC [H]

Synonym: Rleg2_0955

Alternate gene names: 209548558

Gene position: 981157-980141 (Counterclockwise)

Preceding gene: 209548559

Following gene: 209548557

Centisome position: 21.62

GC content: 61.85

Gene sequence:

>1017_bases
TTGCAGACAACCGTTGAGCCCATGCGCGGTACGAATGATCCGGTACAATCGCTCGAGCTGTCGCTGGTCGTGCCGATTTT
CAACGAAGAGGATAGCGTCGGCCCGCTCGTCGAGCGTGTCGTGGCTGCGATGGCCGGCTATCCCCATCGCTGGGAGCTGA
TCCTCATCGACGACGGCAGCACGGATGCGACGCTCGTCAACGCCCGCAAATTCGTCGGACGCGATGGGCTGACGCTCAGG
ATCGTCGAGCTGCAGCGCAACTTCGGCCAGACTGCCGCCATGCAGGCCGGTATCGACACTGCCCAGGGCCGCCTGATCGC
AACGATGGACGGCGACCTGCAGAACGATCCGAAGGACATTCCTTCGATGGTCGCCGAATTGGAACGGCGTGAACTCGACC
TCCTGGTGGGATGGCGCAAGAACCGCAAGGACGGTCTGTTCTTGCGCAAGATTCCCTCCTGGTGCGCCAATTACCTGATC
GGCCGGATCACCGGCGTCAAGCTGCACGATTACGGCTGCAGCCTGAAGATCTACCGCGCCTCGATCATCAAGCAGGTGAA
GCTGATGGGCGAAATGCACCGCTTCATCCCGGCCTGGGTGGCCGGCGTCGTCCCGAGCTCGCGCATCGGCGAGATGGCCG
TCACCCACCATGCCCGCGAACACGGCGTTTCGAAATACGGCATTTCGCGCACCTTCCGCGTCATCCTCGATCTGCTGTCG
GTGATGTTCTTCATGCGCTACAAGGCCCGGCCCGGGCATTTCTTCGGCTCGTTGGGTCTCGGCCTCGGCGCGGTCGCCAT
GCTGATCCTGCTCTATCTCGGCTTCGACAAGTTCATCATGGGCAACGACATCGGCACGCGCCCGATGCTGATGGTCGGCG
TCGTGCTGCTGCTGTCGTCGGTGCAGATGATCACCACCGGCATCCTGGCGGAGATGATCGCGCGCACCTATTACCGCGAC
GACGCCTCTCCGAATTATATCGTGCGGCAGATCTTCGACGATCGAAGCCAAGCCTAA

Upstream 100 bases:

>100_bases
TGCCGGCTGGCAACCGGTGGACACTTCATGTACTAGCCTTCCGCAAGTGCGGCGGCGGCAGTAAGGATTGCCTGGCCGTC
CGGCCTTTTGGAGATGAAAG

Downstream 100 bases:

>100_bases
GCCGGCAGCACGATGCTGGAGCGCGCAACGAGGACGATCAAAACCGCGGGCCTGCTGCTTGCGGCCTATTTCGTGCTCAA
CATCGTGCTGCGCATCGCGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQTTVEPMRGTNDPVQSLELSLVVPIFNEEDSVGPLVERVVAAMAGYPHRWELILIDDGSTDATLVNARKFVGRDGLTLR
IVELQRNFGQTAAMQAGIDTAQGRLIATMDGDLQNDPKDIPSMVAELERRELDLLVGWRKNRKDGLFLRKIPSWCANYLI
GRITGVKLHDYGCSLKIYRASIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMAVTHHAREHGVSKYGISRTFRVILDLLS
VMFFMRYKARPGHFFGSLGLGLGAVAMLILLYLGFDKFIMGNDIGTRPMLMVGVVLLLSSVQMITTGILAEMIARTYYRD
DASPNYIVRQIFDDRSQA

Sequences:

>Translated_338_residues
MQTTVEPMRGTNDPVQSLELSLVVPIFNEEDSVGPLVERVVAAMAGYPHRWELILIDDGSTDATLVNARKFVGRDGLTLR
IVELQRNFGQTAAMQAGIDTAQGRLIATMDGDLQNDPKDIPSMVAELERRELDLLVGWRKNRKDGLFLRKIPSWCANYLI
GRITGVKLHDYGCSLKIYRASIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMAVTHHAREHGVSKYGISRTFRVILDLLS
VMFFMRYKARPGHFFGSLGLGLGAVAMLILLYLGFDKFIMGNDIGTRPMLMVGVVLLLSSVQMITTGILAEMIARTYYRD
DASPNYIVRQIFDDRSQA
>Mature_338_residues
MQTTVEPMRGTNDPVQSLELSLVVPIFNEEDSVGPLVERVVAAMAGYPHRWELILIDDGSTDATLVNARKFVGRDGLTLR
IVELQRNFGQTAAMQAGIDTAQGRLIATMDGDLQNDPKDIPSMVAELERRELDLLVGWRKNRKDGLFLRKIPSWCANYLI
GRITGVKLHDYGCSLKIYRASIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMAVTHHAREHGVSKYGISRTFRVILDLLS
VMFFMRYKARPGHFFGSLGLGLGAVAMLILLYLGFDKFIMGNDIGTRPMLMVGVVLLLSSVQMITTGILAEMIARTYYRD
DASPNYIVRQIFDDRSQA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=232, Percent_Identity=27.5862068965517, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1788588, Length=332, Percent_Identity=32.5301204819277, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1788692, Length=318, Percent_Identity=27.6729559748428, Blast_Score=119, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71999402, Length=227, Percent_Identity=28.1938325991189, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24585265, Length=226, Percent_Identity=26.9911504424779, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37778; Mature: 37778

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTVEPMRGTNDPVQSLELSLVVPIFNEEDSVGPLVERVVAAMAGYPHRWELILIDDGS
CCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCC
TDATLVNARKFVGRDGLTLRIVELQRNFGQTAAMQAGIDTAQGRLIATMDGDLQNDPKDI
CCHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHCCCCHHCCEEEEEECCCCCCCHHHH
PSMVAELERRELDLLVGWRKNRKDGLFLRKIPSWCANYLIGRITGVKLHDYGCSLKIYRA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHH
SIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMAVTHHAREHGVSKYGISRTFRVILDLLS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VMFFMRYKARPGHFFGSLGLGLGAVAMLILLYLGFDKFIMGNDIGTRPMLMVGVVLLLSS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHH
VQMITTGILAEMIARTYYRDDASPNYIVRQIFDDRSQA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTTVEPMRGTNDPVQSLELSLVVPIFNEEDSVGPLVERVVAAMAGYPHRWELILIDDGS
CCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCC
TDATLVNARKFVGRDGLTLRIVELQRNFGQTAAMQAGIDTAQGRLIATMDGDLQNDPKDI
CCHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHCCCCHHCCEEEEEECCCCCCCHHHH
PSMVAELERRELDLLVGWRKNRKDGLFLRKIPSWCANYLIGRITGVKLHDYGCSLKIYRA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEHHHH
SIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMAVTHHAREHGVSKYGISRTFRVILDLLS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VMFFMRYKARPGHFFGSLGLGLGAVAMLILLYLGFDKFIMGNDIGTRPMLMVGVVLLLSS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHHHHHHHH
VQMITTGILAEMIARTYYRDDASPNYIVRQIFDDRSQA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA