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The map label for this gene is ycgN [C]

Identifier: 209548498

GI number: 209548498

Start: 912205

End: 912687

Strand: Direct

Name: ycgN [C]

Synonym: Rleg2_0895

Alternate gene names: 209548498

Gene position: 912205-912687 (Clockwise)

Preceding gene: 209548494

Following gene: 209548500

Centisome position: 20.1

GC content: 58.59

Gene sequence:

>483_bases
ATGAACGATCTGCCCTTCTGGAAGCGCAAGACGCTTGCCGAAATGACTGTCGCCGAGTGGGAAAGCCTCTGCGACGGCTG
CGGTCTCTGTTGCCTCAACAAGATCGAGGAATGGGATAGCGGCGATATCTATTTCACCTCGGTCAGCTGCAAGCTGCTCG
ACGGCGAAAGCTGTCGCTGCTCCAGCTATGAGAACCGCTGGGATTTCGTTCCCGATTGCGTGCAACTGACCAAGGAGAAC
GTGCCCGATATCGCCTGGCTGCCGCCCACCTGCGGCTACCGGCTGGTCAATGAAGGCCGTGATCTCTACTGGTGGCATCC
GCTGATCTCCGGCGATCCGGAAACCGTTCATGCCGCCGGCATTTCCGCGCGCGGCCGCACGATCAACGAAAACGAGATCG
ATATCGACGATCTCGAAGACTACGTTGTCGACTGGCCGCTGACCGTGGGTGAAGAGAAGGACGAGGAAGAGGAAGAGGCG
TAA

Upstream 100 bases:

>100_bases
ACCAGGAGCATGCTGAAGAATTGATTGATTTTGCGGCTGATAACAAGAGAGATAGATGGCGGTCACGTCAATTTGCGGGC
CGCTGTTGCAAGAAACGACG

Downstream 100 bases:

>100_bases
GCGGCTCAGCTTTTTACCGCTGCGAGGAAGCGGCGCAATTCCACCTCCACATATTTGTCCACCGGCCCCTCAGCGCCAAA
GCCCCACCAGGTGAGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNDLPFWKRKTLAEMTVAEWESLCDGCGLCCLNKIEEWDSGDIYFTSVSCKLLDGESCRCSSYENRWDFVPDCVQLTKEN
VPDIAWLPPTCGYRLVNEGRDLYWWHPLISGDPETVHAAGISARGRTINENEIDIDDLEDYVVDWPLTVGEEKDEEEEEA

Sequences:

>Translated_160_residues
MNDLPFWKRKTLAEMTVAEWESLCDGCGLCCLNKIEEWDSGDIYFTSVSCKLLDGESCRCSSYENRWDFVPDCVQLTKEN
VPDIAWLPPTCGYRLVNEGRDLYWWHPLISGDPETVHAAGISARGRTINENEIDIDDLEDYVVDWPLTVGEEKDEEEEEA
>Mature_160_residues
MNDLPFWKRKTLAEMTVAEWESLCDGCGLCCLNKIEEWDSGDIYFTSVSCKLLDGESCRCSSYENRWDFVPDCVQLTKEN
VPDIAWLPPTCGYRLVNEGRDLYWWHPLISGDPETVHAAGISARGRTINENEIDIDDLEDYVVDWPLTVGEEKDEEEEEA

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=146, Percent_Identity=50, Blast_Score=166, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y895_RHILW (B5ZVD0)

Other databases:

- EMBL:   CP001191
- RefSeq:   YP_002280415.1
- GeneID:   6979613
- GenomeReviews:   CP001191_GR
- KEGG:   rlt:Rleg2_0895
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- ProtClustDB:   PRK05170
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 18361; Mature: 18361

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLPFWKRKTLAEMTVAEWESLCDGCGLCCLNKIEEWDSGDIYFTSVSCKLLDGESCRC
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCC
SSYENRWDFVPDCVQLTKENVPDIAWLPPTCGYRLVNEGRDLYWWHPLISGDPETVHAAG
CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCEECCCCEEEEECCCCCCCCCEEEECC
ISARGRTINENEIDIDDLEDYVVDWPLTVGEEKDEEEEEA
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDLPFWKRKTLAEMTVAEWESLCDGCGLCCLNKIEEWDSGDIYFTSVSCKLLDGESCRC
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCC
SSYENRWDFVPDCVQLTKENVPDIAWLPPTCGYRLVNEGRDLYWWHPLISGDPETVHAAG
CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCEECCCCEEEEECCCCCCCCCEEEECC
ISARGRTINENEIDIDDLEDYVVDWPLTVGEEKDEEEEEA
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA