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The map label for this gene is 209548453

Identifier: 209548453

GI number: 209548453

Start: 867267

End: 867707

Strand: Direct

Name: 209548453

Synonym: Rleg2_0850

Alternate gene names: NA

Gene position: 867267-867707 (Clockwise)

Preceding gene: 209548452

Following gene: 209548454

Centisome position: 19.11

GC content: 64.63

Gene sequence:

>441_bases
ATGAATTGGAAAGCAGTAGCTGCCGCCGCAGCGATGGCAGGAATAGCCTTCGGTTCGGTGACCGCCGCCGACGGCACGCA
TGATTCGCGCATTGCCCTGATGAAGCAGATCGGCGGTGCGGCCGGCGCCTTGGGAGCCATCGCCAAGGGCACCAAGCCCT
ATGACGCCGAAGCCGTGAAAGCGGCGCTGACGACGATTGCCGCAACGGCCAAGGTGTTCCCCGATCAGTTCAAGCCGGGC
ACGGAAACGGGCGACCAAGAAGCGAGCCCGAAAATCTGGGAAAACATGGATGACTTCAAGGCGCGCGCCGCGAAGCTCTC
CACCGATGCCGAAACCGCGCTCGCCCAGCTTCCGGCCGATGCCGCGGCTGTCGGCGCCACGGTCAACACGCTCGGCGCCA
GCTGCGGCGGCTGTCACAAGGCCTATCGCATCAAGGAGTGA

Upstream 100 bases:

>100_bases
CGTGACTGCCCGGAGGGCATGGATTTTGTCATGCTCCCGGTGCAGATTGGCCGTCGGCCGCCTTGGCTCGGGAAAATGCA
GAAAAGAAATGGAGAGGAAT

Downstream 100 bases:

>100_bases
GCGATAGGTCATTCCCCTCCGACACCGATCCGCGCCAGCCTTGCCGCCGGCGCGGATCACCTTATTCTCCGCCTGTTCGG
GGCTGATCGCAGAATCGGTC

Product: cytochrome C prime

Products: NA

Alternate protein names: Cytochrome c556 [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNWKAVAAAAAMAGIAFGSVTAADGTHDSRIALMKQIGGAAGALGAIAKGTKPYDAEAVKAALTTIAATAKVFPDQFKPG
TETGDQEASPKIWENMDDFKARAAKLSTDAETALAQLPADAAAVGATVNTLGASCGGCHKAYRIKE

Sequences:

>Translated_146_residues
MNWKAVAAAAAMAGIAFGSVTAADGTHDSRIALMKQIGGAAGALGAIAKGTKPYDAEAVKAALTTIAATAKVFPDQFKPG
TETGDQEASPKIWENMDDFKARAAKLSTDAETALAQLPADAAAVGATVNTLGASCGGCHKAYRIKE
>Mature_146_residues
MNWKAVAAAAAMAGIAFGSVTAADGTHDSRIALMKQIGGAAGALGAIAKGTKPYDAEAVKAALTTIAATAKVFPDQFKPG
TETGDQEASPKIWENMDDFKARAAKLSTDAETALAQLPADAAAVGATVNTLGASCGGCHKAYRIKE

Specific function: Low-spin monoheme cytochrome c [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127
- InterPro:   IPR015984 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 14725; Mature: 14725

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWKAVAAAAAMAGIAFGSVTAADGTHDSRIALMKQIGGAAGALGAIAKGTKPYDAEAVK
CCCHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
AALTTIAATAKVFPDQFKPGTETGDQEASPKIWENMDDFKARAAKLSTDAETALAQLPAD
HHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHCCCC
AAAVGATVNTLGASCGGCHKAYRIKE
HHHHHHHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure
MNWKAVAAAAAMAGIAFGSVTAADGTHDSRIALMKQIGGAAGALGAIAKGTKPYDAEAVK
CCCHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH
AALTTIAATAKVFPDQFKPGTETGDQEASPKIWENMDDFKARAAKLSTDAETALAQLPAD
HHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHCCCC
AAAVGATVNTLGASCGGCHKAYRIKE
HHHHHHHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6309523 [H]