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The map label for this gene is ydiF [H]

Identifier: 209548423

GI number: 209548423

Start: 835041

End: 836561

Strand: Reverse

Name: ydiF [H]

Synonym: Rleg2_0820

Alternate gene names: 209548423

Gene position: 836561-835041 (Counterclockwise)

Preceding gene: 209548424

Following gene: 209548422

Centisome position: 18.43

GC content: 64.89

Gene sequence:

>1521_bases
ATGACCCTCATCAATATCCGCAATCTCGGCGTGACGCTGGGCAATCCGCTGTTTACGAAACTCAATCTCGTCGTCAATTC
AGGCGACCGCATCGGCCTCGTCGCCGCCAACGGGCGGGGAAAGTCGACGCTGCTTGCCTGCATCACCGGCGCGCTGGAGC
CGAGCGCGGGCGAGATCACCAAGGCGCGCGGGCTGACCGTCGGCCATGTCGCGCAGAACGTGCCGGCGGCACTGTTCGAC
ACGCCGTTCTACGATGCGGTGCTGCAGGCGCTGCCGGCCGATCAGGCCGACAGCGAGAGCTGGCGCGTCGACGTGGTGCT
GGAATCGCTCGAGGTGCCGGAGGTCATGCGCTCCCGGCCGCTGAAGCAATTGAGCGGCGGATGGCAGCGGCTCGCCATGC
TTGCCCGCACCTGGGTCAGCGAACCCGACGTGCTGCTGCTCGACGAGCCGACCAACCATCTCGACCTCGAAAAGATCGCC
CAGTTGGAGGGTTGGCTGAACGCGCTGCCGCGCGACGTACCGGTCATCCTCTCCAGCCATGACCGCGCCTTTCTCGATGC
GACGACCAACCGGACACTGTTCCTGCGGCCGGAGCAATCGCCGGTCTTCGCCCTGCCCTATACCCGGGCGCGCGCCGCGC
TCGATGAGGCCGACGCCTCGGCAGCCCGGCGCTACGAGCGCGACATCAAGGTGGCGGAGCAGTTGCGCAAGCAGGCGGCC
AAGCTCAACAATATCGGCATCAATTCCGGCAGCGATCTGCTCGTCGTCAAGACGAAGCAGTTGAAGCAGCGGGCGGAGAA
GCTCGAGGATGCGGCAAAACCGGCGCATCTCGAACGCTCGGCCGGCTTCATCCGGCTCTCCAACCGCGGCACCCATGCCA
AGGTGCTGGTGACGCTGGAGGATGCGGCGGTGACGACGCCGGATGGCACGCTGCTATTCAAGACCGGCCGCCAGTTCATC
TGCCAGGGTGACCGGATCGTGCTTCTCGGCCTCAACGGCGCCGGCAAATCGCGACTGGTCTTGAAGCTGAAGCAGGCAAT
CGAAAGATCGGAGGCGGGACAGGATGGCCTCAAGGCGACGCCGTCGGTCGTTCTCGGCTATGGCGACCAGGCGCTTGCCG
ACCTTGCCGACAAGGATACGCCGATCGGCACGATCATCCGCCGTTTCGATGTCGGCGATCAGCGGGCGCGGGCCTTGCTG
GCTGGTGCCGGCATTACGATCGATATGCAGGCAAAACCGATCGGCCAGCTTTCCGGCGGCCAGAAGGCGCGGCTCGGCAT
GCTGGTGCTCAGGCTGACCGAGCCGAATTTTTACCTGCTCGACGAGCCGACGAACCACCTCGACATCGAGGGGCAGGAAG
CACTGGAGAGCGAGCTGATGGCGCAGGAGGCGAGCTGCCTGCTGGTCTCGCACGACCGCAGTTTCGTGCGGGCGGTGGGA
AATCGGTTCTGGCTGATCGAGAAGAAGAAGCTGGTGGAGCTGGAGAGCCCGGAAGGGTTTTTTGCTTCGGTTGCGGGATA
A

Upstream 100 bases:

>100_bases
TCGAGCGCGCATTCCTGTAATTTCCCGGGCCAATTACCCGCAATTCCGTGATGGCTGAACGCCCCGGATCGCGCCCCCCG
GTCAAGACCAGAGAATAATC

Downstream 100 bases:

>100_bases
TGGGGATGATCAGTGGTGGGGCGTGCCGCCCCCTCCGCGATCGGCCCGCAACAAATCTCAACGTTAAAAGACACTCCGCA
ACATCGGAGCGGGGCATGTT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MTLINIRNLGVTLGNPLFTKLNLVVNSGDRIGLVAANGRGKSTLLACITGALEPSAGEITKARGLTVGHVAQNVPAALFD
TPFYDAVLQALPADQADSESWRVDVVLESLEVPEVMRSRPLKQLSGGWQRLAMLARTWVSEPDVLLLDEPTNHLDLEKIA
QLEGWLNALPRDVPVILSSHDRAFLDATTNRTLFLRPEQSPVFALPYTRARAALDEADASAARRYERDIKVAEQLRKQAA
KLNNIGINSGSDLLVVKTKQLKQRAEKLEDAAKPAHLERSAGFIRLSNRGTHAKVLVTLEDAAVTTPDGTLLFKTGRQFI
CQGDRIVLLGLNGAGKSRLVLKLKQAIERSEAGQDGLKATPSVVLGYGDQALADLADKDTPIGTIIRRFDVGDQRARALL
AGAGITIDMQAKPIGQLSGGQKARLGMLVLRLTEPNFYLLDEPTNHLDIEGQEALESELMAQEASCLLVSHDRSFVRAVG
NRFWLIEKKKLVELESPEGFFASVAG

Sequences:

>Translated_506_residues
MTLINIRNLGVTLGNPLFTKLNLVVNSGDRIGLVAANGRGKSTLLACITGALEPSAGEITKARGLTVGHVAQNVPAALFD
TPFYDAVLQALPADQADSESWRVDVVLESLEVPEVMRSRPLKQLSGGWQRLAMLARTWVSEPDVLLLDEPTNHLDLEKIA
QLEGWLNALPRDVPVILSSHDRAFLDATTNRTLFLRPEQSPVFALPYTRARAALDEADASAARRYERDIKVAEQLRKQAA
KLNNIGINSGSDLLVVKTKQLKQRAEKLEDAAKPAHLERSAGFIRLSNRGTHAKVLVTLEDAAVTTPDGTLLFKTGRQFI
CQGDRIVLLGLNGAGKSRLVLKLKQAIERSEAGQDGLKATPSVVLGYGDQALADLADKDTPIGTIIRRFDVGDQRARALL
AGAGITIDMQAKPIGQLSGGQKARLGMLVLRLTEPNFYLLDEPTNHLDIEGQEALESELMAQEASCLLVSHDRSFVRAVG
NRFWLIEKKKLVELESPEGFFASVAG
>Mature_505_residues
TLINIRNLGVTLGNPLFTKLNLVVNSGDRIGLVAANGRGKSTLLACITGALEPSAGEITKARGLTVGHVAQNVPAALFDT
PFYDAVLQALPADQADSESWRVDVVLESLEVPEVMRSRPLKQLSGGWQRLAMLARTWVSEPDVLLLDEPTNHLDLEKIAQ
LEGWLNALPRDVPVILSSHDRAFLDATTNRTLFLRPEQSPVFALPYTRARAALDEADASAARRYERDIKVAEQLRKQAAK
LNNIGINSGSDLLVVKTKQLKQRAEKLEDAAKPAHLERSAGFIRLSNRGTHAKVLVTLEDAAVTTPDGTLLFKTGRQFIC
QGDRIVLLGLNGAGKSRLVLKLKQAIERSEAGQDGLKATPSVVLGYGDQALADLADKDTPIGTIIRRFDVGDQRARALLA
GAGITIDMQAKPIGQLSGGQKARLGMLVLRLTEPNFYLLDEPTNHLDIEGQEALESELMAQEASCLLVSHDRSFVRAVGN
RFWLIEKKKLVELESPEGFFASVAG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=27.7153558052434, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=26.5917602996255, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=26.5917602996255, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI10947135, Length=522, Percent_Identity=26.8199233716475, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI69354671, Length=522, Percent_Identity=26.8199233716475, Blast_Score=144, Evalue=3e-34,
Organism=Escherichia coli, GI1789751, Length=501, Percent_Identity=30.3393213572854, Blast_Score=168, Evalue=8e-43,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=27.3069679849341, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1787182, Length=537, Percent_Identity=27.7467411545624, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI2367384, Length=516, Percent_Identity=28.2945736434109, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI1788165, Length=199, Percent_Identity=28.1407035175879, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=28.9099526066351, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788225, Length=224, Percent_Identity=25.8928571428571, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787758, Length=181, Percent_Identity=28.1767955801105, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=26.6294227188082, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17553372, Length=540, Percent_Identity=27.4074074074074, Blast_Score=148, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI17555318, Length=527, Percent_Identity=26.5654648956357, Blast_Score=132, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6321121, Length=411, Percent_Identity=28.4671532846715, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=24.7081712062257, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=216, Percent_Identity=30.5555555555556, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324314, Length=173, Percent_Identity=31.7919075144509, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323278, Length=171, Percent_Identity=33.9181286549708, Blast_Score=73, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24666836, Length=523, Percent_Identity=29.0630975143403, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24641342, Length=529, Percent_Identity=27.5992438563327, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24642252, Length=530, Percent_Identity=26.4150943396226, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI18859989, Length=530, Percent_Identity=26.4150943396226, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI85725262, Length=158, Percent_Identity=33.5443037974684, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 55014; Mature: 54883

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLINIRNLGVTLGNPLFTKLNLVVNSGDRIGLVAANGRGKSTLLACITGALEPSAGEIT
CEEEEEEECCEECCCCCEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCH
KARGLTVGHVAQNVPAALFDTPFYDAVLQALPADQADSESWRVDVVLESLEVPEVMRSRP
HHCCCCHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHCCC
LKQLSGGWQRLAMLARTWVSEPDVLLLDEPTNHLDLEKIAQLEGWLNALPRDVPVILSSH
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
DRAFLDATTNRTLFLRPEQSPVFALPYTRARAALDEADASAARRYERDIKVAEQLRKQAA
CCEEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLNNIGINSGSDLLVVKTKQLKQRAEKLEDAAKPAHLERSAGFIRLSNRGTHAKVLVTLE
HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCEEEEEEEEE
DAAVTTPDGTLLFKTGRQFICQGDRIVLLGLNGAGKSRLVLKLKQAIERSEAGQDGLKAT
CCEEECCCCEEEEECCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PSVVLGYGDQALADLADKDTPIGTIIRRFDVGDQRARALLAGAGITIDMQAKPIGQLSGG
CCEEEECCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHEEECCCEEEEECCCCCCCCCCC
QKARLGMLVLRLTEPNFYLLDEPTNHLDIEGQEALESELMAQEASCLLVSHDRSFVRAVG
CCCEEEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHC
NRFWLIEKKKLVELESPEGFFASVAG
CEEEEEECCCEEEECCCCCCEEECCC
>Mature Secondary Structure 
TLINIRNLGVTLGNPLFTKLNLVVNSGDRIGLVAANGRGKSTLLACITGALEPSAGEIT
EEEEEEECCEECCCCCEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCH
KARGLTVGHVAQNVPAALFDTPFYDAVLQALPADQADSESWRVDVVLESLEVPEVMRSRP
HHCCCCHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHCCC
LKQLSGGWQRLAMLARTWVSEPDVLLLDEPTNHLDLEKIAQLEGWLNALPRDVPVILSSH
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
DRAFLDATTNRTLFLRPEQSPVFALPYTRARAALDEADASAARRYERDIKVAEQLRKQAA
CCEEEEECCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLNNIGINSGSDLLVVKTKQLKQRAEKLEDAAKPAHLERSAGFIRLSNRGTHAKVLVTLE
HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCEEEEEEEEE
DAAVTTPDGTLLFKTGRQFICQGDRIVLLGLNGAGKSRLVLKLKQAIERSEAGQDGLKAT
CCEEECCCCEEEEECCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PSVVLGYGDQALADLADKDTPIGTIIRRFDVGDQRARALLAGAGITIDMQAKPIGQLSGG
CCEEEECCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHEEECCCEEEEECCCCCCCCCCC
QKARLGMLVLRLTEPNFYLLDEPTNHLDIEGQEALESELMAQEASCLLVSHDRSFVRAVG
CCCEEEEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHC
NRFWLIEKKKLVELESPEGFFASVAG
CEEEEEECCCEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]