| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is osmC [C]
Identifier: 209548417
GI number: 209548417
Start: 830609
End: 831031
Strand: Direct
Name: osmC [C]
Synonym: Rleg2_0814
Alternate gene names: 209548417
Gene position: 830609-831031 (Clockwise)
Preceding gene: 209548415
Following gene: 209548419
Centisome position: 18.3
GC content: 65.96
Gene sequence:
>423_bases ATGCCAATTCTCTATACGACCAAAGCCTCTGCCACCGGCGGCCGCGCCGGCCGCGCCGTTTCCGAAAACGGCGTTCTGGA CGTGACGCTGACCGTTCCGAAGGAACTCGGCGGCGACGGCGCGACCGGCACCAATCCCGAGCAGCTCTTCGCCGCCGGCT ACTCCGCCTGCTTCCTCGGTGCCTTGAAATTTGTCGCGGGCCAGCAGAAGGTCAAGATTCCCGAGGAAACGACGGTCTCC GCCAAGGTCGGCATCGGCCCGCGCGAAGACGGCACGGGCTTCGGCATCGAAGTGGCCCTGACGGTCAACATCCCCGGTCT CGACCGCGAAACCGCCGAAAAGCTCGCCGCCGCAGCCCACATCGTCTGCCCCTACAGCCACGCCATGCGCACTTCGACCG AAGTGCCGGTCACGGTCTCCTGA
Upstream 100 bases:
>100_bases TCCATGTCGAAATGCAATTTGCAAAATTCACTTGCGTACAATTTAATTGTGCGATAGTGAAAATCCAACCCGATCGAAGG GCCAACCAAAGGAGATCGTC
Downstream 100 bases:
>100_bases TCCAGACGCTATCGGTGAAAATGCGGGCGACGGCTTCCGACTTCGGTTGGAGGCCGTCGCTTTTCTTGCTGCTGACACGA ACGGCGTGCTCGTCACATGG
Product: OsmC family protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPILYTTKASATGGRAGRAVSENGVLDVTLTVPKELGGDGATGTNPEQLFAAGYSACFLGALKFVAGQQKVKIPEETTVS AKVGIGPREDGTGFGIEVALTVNIPGLDRETAEKLAAAAHIVCPYSHAMRTSTEVPVTVS
Sequences:
>Translated_140_residues MPILYTTKASATGGRAGRAVSENGVLDVTLTVPKELGGDGATGTNPEQLFAAGYSACFLGALKFVAGQQKVKIPEETTVS AKVGIGPREDGTGFGIEVALTVNIPGLDRETAEKLAAAAHIVCPYSHAMRTSTEVPVTVS >Mature_139_residues PILYTTKASATGGRAGRAVSENGVLDVTLTVPKELGGDGATGTNPEQLFAAGYSACFLGALKFVAGQQKVKIPEETTVSA KVGIGPREDGTGFGIEVALTVNIPGLDRETAEKLAAAAHIVCPYSHAMRTSTEVPVTVS
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14346; Mature: 14215
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILYTTKASATGGRAGRAVSENGVLDVTLTVPKELGGDGATGTNPEQLFAAGYSACFLG CCEEEECCCCCCCCCCCCEECCCCEEEEEEECCHHCCCCCCCCCCHHHHHHHCHHHHHHH ALKFVAGQQKVKIPEETTVSAKVGIGPREDGTGFGIEVALTVNIPGLDRETAEKLAAAAH HHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHE IVCPYSHAMRTSTEVPVTVS EECCCHHHHCCCCCCCEEEC >Mature Secondary Structure PILYTTKASATGGRAGRAVSENGVLDVTLTVPKELGGDGATGTNPEQLFAAGYSACFLG CEEEECCCCCCCCCCCCEECCCCEEEEEEECCHHCCCCCCCCCCHHHHHHHCHHHHHHH ALKFVAGQQKVKIPEETTVSAKVGIGPREDGTGFGIEVALTVNIPGLDRETAEKLAAAAH HHHHHCCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHE IVCPYSHAMRTSTEVPVTVS EECCCHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9226277 [H]