| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yihX [C]
Identifier: 209548257
GI number: 209548257
Start: 672782
End: 673399
Strand: Reverse
Name: yihX [C]
Synonym: Rleg2_0651
Alternate gene names: 209548257
Gene position: 673399-672782 (Counterclockwise)
Preceding gene: 209548258
Following gene: 209548256
Centisome position: 14.84
GC content: 59.39
Gene sequence:
>618_bases ATGACTACGACTGAGATAAAACATATCGTTTTCGATATCGGCAAAGTCCTTATTCATTACGATCCGCATCTTGCCTTCGC CCGCCTCATTCCCGACGAGACGGACCGCAACTGGTTCTTCGCCAATATCTGCACCCATGACTGGAACATCGAGCAGGACC GGGGCCGCACCTGGGCAGAGGCCGAAGCGCTGCTGATTGCCGAGCATCCGGCCCGTGAAGAGCATATCCGCGCCTTCCGC AAATATTGGCACGAGATGGTGCCGCACGCCTACGACGACAGCGTCGCGATCATGGAAGGGCTGATCGCCGAAGGGCGCGA TGTGACGATGCTGACCAACTTCGCCTCCGACACCTTCCGCGAGGCGCAGCAGCGCTTTCCCTTCCTCACCAAAACGCGCG GTGTCACCGTTTCCGGCGATGTCGGCCTGATCAAGCCGGATCTGGCGATCTACGAGACGCATACGAAGAGCTTCGGCCTC GACCCCAAGGCGACGATCTTCATCGACGACGCGCCTGCCAATGTCGAAGGCGCCAAGGAATTCGGCTGGAATGCGGTGCT GTTTTCCGGCGCGGACAAGCTGCGCAGCGATCTTGCCGCTTACGGCCTGAAGGTTTGA
Upstream 100 bases:
>100_bases AGCCGGTTACAAATCTTGAAGCGCAGGCCTTGCCGACCATCATGAAAAAAGCGATCGCAGCGGCTATTCCTCTCGCGTTC AAAACATCCAAGGGATGACC
Downstream 100 bases:
>100_bases AGCCATGGCTTTCGATCCCGCAGAGGAAATCGACCGCTTTCACGCCGCCATCAACGCCCTCGACTTCGCCGCGATCGAGG CCTATTTCGCCGAGGATGCC
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Alpha Beta Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; HAD Family Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase-Like Family Hydrolase; HAD-Superfamily Hydrolase Subfamily IA; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTTTEIKHIVFDIGKVLIHYDPHLAFARLIPDETDRNWFFANICTHDWNIEQDRGRTWAEAEALLIAEHPAREEHIRAFR KYWHEMVPHAYDDSVAIMEGLIAEGRDVTMLTNFASDTFREAQQRFPFLTKTRGVTVSGDVGLIKPDLAIYETHTKSFGL DPKATIFIDDAPANVEGAKEFGWNAVLFSGADKLRSDLAAYGLKV
Sequences:
>Translated_205_residues MTTTEIKHIVFDIGKVLIHYDPHLAFARLIPDETDRNWFFANICTHDWNIEQDRGRTWAEAEALLIAEHPAREEHIRAFR KYWHEMVPHAYDDSVAIMEGLIAEGRDVTMLTNFASDTFREAQQRFPFLTKTRGVTVSGDVGLIKPDLAIYETHTKSFGL DPKATIFIDDAPANVEGAKEFGWNAVLFSGADKLRSDLAAYGLKV >Mature_204_residues TTTEIKHIVFDIGKVLIHYDPHLAFARLIPDETDRNWFFANICTHDWNIEQDRGRTWAEAEALLIAEHPAREEHIRAFRK YWHEMVPHAYDDSVAIMEGLIAEGRDVTMLTNFASDTFREAQQRFPFLTKTRGVTVSGDVGLIKPDLAIYETHTKSFGLD PKATIFIDDAPANVEGAKEFGWNAVLFSGADKLRSDLAAYGLKV
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23280; Mature: 23148
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTEIKHIVFDIGKVLIHYDPHLAFARLIPDETDRNWFFANICTHDWNIEQDRGRTWAE CCCHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCEEEEEEEECCCCCCHHCCCCCHH AEALLIAEHPAREEHIRAFRKYWHEMVPHAYDDSVAIMEGLIAEGRDVTMLTNFASDTFR HCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHH EAQQRFPFLTKTRGVTVSGDVGLIKPDLAIYETHTKSFGLDPKATIFIDDAPANVEGAKE HHHHHCCCEECCCCEEEECCCCEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHH FGWNAVLFSGADKLRSDLAAYGLKV CCCEEEEECCHHHHHHHHHHHCCCC >Mature Secondary Structure TTTEIKHIVFDIGKVLIHYDPHLAFARLIPDETDRNWFFANICTHDWNIEQDRGRTWAE CCHHHHHHHHHHHHHEEEECCCHHHHHHCCCCCCCCEEEEEEEECCCCCCHHCCCCCHH AEALLIAEHPAREEHIRAFRKYWHEMVPHAYDDSVAIMEGLIAEGRDVTMLTNFASDTFR HCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHH EAQQRFPFLTKTRGVTVSGDVGLIKPDLAIYETHTKSFGLDPKATIFIDDAPANVEGAKE HHHHHCCCEECCCCEEEECCCCEECCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHH FGWNAVLFSGADKLRSDLAAYGLKV CCCEEEEECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA